Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3PY3
DownloadVisualize
BU of 3py3 by Molmil
Crystal structure of phosphorylated p38alpha MAP kinase
Descriptor: Mitogen-activated protein kinase 14
Authors:Zhang, Y.Y, Wu, J.W, Wang, Z.X.
Deposit date:2010-12-11
Release date:2011-03-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mitogen-activated Protein Kinase (MAPK) Phosphatase 3-mediated Cross-talk between MAPKs ERK2 and p38{alpha}.
J.Biol.Chem., 286, 2011
6A9D
DownloadVisualize
BU of 6a9d by Molmil
Crystal structure of the strigolactone receptor ShHTL7 from Striga hermonthica
Descriptor: GLYCEROL, Hyposensitive to light 7
Authors:Zhang, Y.Y, Xi, Z, Wang, D.W.
Deposit date:2018-07-13
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Crystal structure of the strigolactone receptor ShHTL5 from Striga hermonthica
To Be Published
3TG3
DownloadVisualize
BU of 3tg3 by Molmil
Crystal structure of the MAPK binding domain of MKP7
Descriptor: 1,2-ETHANEDIOL, Dual specificity protein phosphatase 16
Authors:Zhang, Y.Y, Liu, X, Wu, J.W, Wang, Z.X.
Deposit date:2011-08-17
Release date:2012-03-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.675 Å)
Cite:A Distinct Interaction Mode Revealed by the Crystal Structure of the Kinase p38alpha with the MAPK Binding Domain of the Phosphatase MKP5.
Sci.Signal., 4, 2011
3TG1
DownloadVisualize
BU of 3tg1 by Molmil
Crystal structure of p38alpha in complex with a MAPK docking partner
Descriptor: Dual specificity protein phosphatase 10, Mitogen-activated protein kinase 14
Authors:Zhang, Y.Y, Wu, J.W, Wang, Z.X.
Deposit date:2011-08-17
Release date:2012-03-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:A Distinct Interaction Mode Revealed by the Crystal Structure of the Kinase p38alpha with the MAPK Binding Domain of the Phosphatase MKP5.
Sci.Signal., 4, 2011
8HLD
DownloadVisualize
BU of 8hld by Molmil
S protein of SARS-CoV-2 in complex with 26434
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Zhang, Y.Y, Guo, Y.Y, Zhou, Q.
Deposit date:2022-11-29
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:A SARS-CoV-2 Spike N-terminal domain neutralizing antibody targets on a glycans shielded silent face and inhibits virus entry via hindering the recognition of RBD and hACE2
To Be Published
8HLC
DownloadVisualize
BU of 8hlc by Molmil
S protein of SARS-CoV-2 in complex with 3711
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, Y.Y, Guo, Y.Y, Zhou, Q.
Deposit date:2022-11-29
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:A SARS-CoV-2 Spike N-terminal domain neutralizing antibody targets on a glycans shielded silent face and inhibits virus entry via hindering the recognition of RBD and hACE2
To Be Published
3JAU
DownloadVisualize
BU of 3jau by Molmil
The cryoEM map of EV71 mature viron in complex with the Fab fragment of antibody D5
Descriptor: Capsid protein VP1, Heavy chain of Fab fragment variable region of antibody D5, Light chain of Fab fragment variable region of antibody D5
Authors:Fan, C, Ye, X.H, Ku, Z.Q, Zuo, T, Kong, L.L, Zhang, C, Shi, J.P, Liu, Q.W, Chen, T, Zhang, Y.Y, Jiang, W, Zhang, L.Q, Huang, Z, Cong, Y.
Deposit date:2015-06-24
Release date:2016-02-10
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structural Basis for Recognition of Human Enterovirus 71 by a Bivalent Broadly Neutralizing Monoclonal Antibody
Plos Pathog., 12, 2016
4F2L
DownloadVisualize
BU of 4f2l by Molmil
Structure of a regulatory domain of AMPK
Descriptor: 5'-AMP-activated protein kinase catalytic subunit alpha-1, MAGNESIUM ION
Authors:Xin, F.J, Zhang, Y.Y, Wang, J, Wang, Z.X, Wu, J.W.
Deposit date:2012-05-08
Release date:2013-06-26
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conserved regulatory elements in AMPK
Nature, 498, 2013
8JD7
DownloadVisualize
BU of 8jd7 by Molmil
endo-1,3-fucanase GH174A
Descriptor: endo-1,3-fucanase
Authors:Chen, G.N, Chang, Y.G, Zhang, Y.Y.
Deposit date:2023-05-12
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of endo-1,3-fucanase at 1.60 Angstroms resolution.
To Be Published
7XUL
DownloadVisualize
BU of 7xul by Molmil
Human SLC26A3 in complex with Tenidap
Descriptor: 5-chloranyl-2-oxidanyl-3-thiophen-2-ylcarbonyl-indole-1-carboxamide, CHOLESTEROL HEMISUCCINATE, Chloride anion exchanger
Authors:Li, X.R, Chi, X.M, Zhang, Y.Y, Zhou, Q.
Deposit date:2022-05-18
Release date:2023-05-24
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Structure of human SLC26A3 in complex with Tenidap
To Be Published
7XUJ
DownloadVisualize
BU of 7xuj by Molmil
Human SLC26A3 in complex with UK5099
Descriptor: (E)-2-cyano-3-(1-phenylindol-3-yl)prop-2-enoic acid, CHOLESTEROL HEMISUCCINATE, Chloride anion exchanger
Authors:Li, X.R, Chi, X.M, Zhang, Y.Y, Zhou, Q.
Deposit date:2022-05-18
Release date:2023-05-24
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:human SLC26A3 in complex with UK5099
To Be Published
7XUH
DownloadVisualize
BU of 7xuh by Molmil
Down-regulated in adenoma in complex with TQR1122
Descriptor: 2-[4,8-dimethyl-2-oxidanylidene-7-[[3-(trifluoromethyl)phenyl]methoxy]chromen-3-yl]ethanoic acid, CHOLESTEROL HEMISUCCINATE, Chloride anion exchanger
Authors:Li, X.R, Chi, X.M, Zhang, Y.Y, Zhou, Q.
Deposit date:2022-05-18
Release date:2023-08-02
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:structure of human SLC26A3 in complex with TQR1122
To Be Published
8IET
DownloadVisualize
BU of 8iet by Molmil
Human SLC26A3 in the apo state
Descriptor: Chloride anion exchanger
Authors:Li, X.R, Chi, X.M, Zhang, Y.Y, Zhou, Q.
Deposit date:2023-02-15
Release date:2024-02-28
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Human SLC26A3 in the apo state
To Be Published
6J2R
DownloadVisualize
BU of 6j2r by Molmil
Crystal structure of Striga hermonthica HTL8 (ShHTL8)
Descriptor: GLYCEROL, Hyposensitive to light 8
Authors:Zhang, Y.Y, Xi, Z.
Deposit date:2019-01-02
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure and biochemical characterization of Striga hermonthica HYPO-SENSITIVE TO LIGHT 8 (ShHTL8) in strigolactone signaling pathway.
Biochem.Biophys.Res.Commun., 523, 2020
7D0A
DownloadVisualize
BU of 7d0a by Molmil
Acinetobacter MlaFEDB complex in ADP-vanadate trapped Vclose conformation
Descriptor: ABC transporter ATP-binding protein, ADENOSINE-5'-DIPHOSPHATE, Anti-sigma factor antagonist, ...
Authors:Zhang, Y.Y, Fan, Q.X, Chi, X.M, Zhou, Q, Li, Y.Y.
Deposit date:2020-09-09
Release date:2020-12-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structures of Acinetobacter baumannii glycerophospholipid transporter.
Cell Discov, 6, 2020
7D09
DownloadVisualize
BU of 7d09 by Molmil
Acinetobacter MlaFEDB complex in ATP-bound Vtrans2 conformation
Descriptor: ABC transporter ATP-binding protein, ADENOSINE-5'-TRIPHOSPHATE, Anti-sigma factor antagonist, ...
Authors:Zhang, Y.Y, Fan, Q.X, Chi, X.M, Zhou, Q, Li, Y.Y.
Deposit date:2020-09-09
Release date:2020-12-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structures of Acinetobacter baumannii glycerophospholipid transporter.
Cell Discov, 6, 2020
7D08
DownloadVisualize
BU of 7d08 by Molmil
Acinetobacter MlaFEDB complex in ATP-bound Vtrans1 conformation
Descriptor: ABC transporter ATP-binding protein, ADENOSINE-5'-TRIPHOSPHATE, Anti-sigma factor antagonist, ...
Authors:Zhang, Y.Y, Fan, Q.X, Chi, X.M, Zhou, Q, Li, Y.Y.
Deposit date:2020-09-09
Release date:2020-12-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structures of Acinetobacter baumannii glycerophospholipid transporter.
Cell Discov, 6, 2020
7D06
DownloadVisualize
BU of 7d06 by Molmil
Cryo EM structure of the nucleotide free Acinetobacter MlaFEDB complex
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, ABC transporter ATP-binding protein, Anti-sigma factor antagonist, ...
Authors:Zhang, Y.Y, Fan, Q.X, Chi, X.M, Zhou, Q, Li, Y.Y.
Deposit date:2020-09-09
Release date:2020-12-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of Acinetobacter baumannii glycerophospholipid transporter.
Cell Discov, 6, 2020
8H97
DownloadVisualize
BU of 8h97 by Molmil
GH86 agarase Aga86A_Wa
Descriptor: Beta-agarase, CALCIUM ION, HEXAETHYLENE GLYCOL
Authors:Zhang, Y.Y, Dong, S, Feng, Y.G, Chang, Y.G.
Deposit date:2022-10-25
Release date:2023-02-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.194 Å)
Cite:Structural characterization on a beta-agarase Aga86A_Wa from Wenyingzhuangia aestuarii reveals the prevalent methyl-galactose accommodation capacity of GH86 enzymes at subsite -1.
Carbohydr Polym, 306, 2023
6M17
DownloadVisualize
BU of 6m17 by Molmil
The 2019-nCoV RBD/ACE2-B0AT1 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, R.H, Zhang, Y.Y, Li, Y.N, Xia, L, Guo, Y.Y, Zhou, Q.
Deposit date:2020-02-24
Release date:2020-03-11
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for the recognition of SARS-CoV-2 by full-length human ACE2.
Science, 367, 2020
7BSX
DownloadVisualize
BU of 7bsx by Molmil
SDR protein NapW-NADP
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Short chain dehydrogenase
Authors:Wen, W.H, Tang, G.L.
Deposit date:2020-03-31
Release date:2021-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reductive inactivation of the hemiaminal pharmacophore for resistance against tetrahydroisoquinoline antibiotics.
Nat Commun, 12, 2021
7BTM
DownloadVisualize
BU of 7btm by Molmil
SDR protein/resistance protein NapW
Descriptor: Short chain dehydrogenase
Authors:Wen, W.H, Tang, G.L.
Deposit date:2020-04-02
Release date:2021-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.08311653 Å)
Cite:Reductive inactivation of the hemiaminal pharmacophore for resistance against tetrahydroisoquinoline antibiotics.
Nat Commun, 12, 2021
8Y1D
DownloadVisualize
BU of 8y1d by Molmil
2up-TM conformation of HKU1-B S protein after incubation of the receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Xia, L.Y, Zhang, Y.Y, Zhou, Q.
Deposit date:2024-01-24
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis for the recognition of HCoV-HKU1 by human TMPRSS2.
Cell Res., 2024
8Y1G
DownloadVisualize
BU of 8y1g by Molmil
The 1up conformation of the HKU1-B S protein in the apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Xia, L.Y, Zhang, Y.Y, Zhou, Q.
Deposit date:2024-01-24
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Structural basis for the recognition of HCoV-HKU1 by human TMPRSS2.
Cell Res., 2024
8Y1A
DownloadVisualize
BU of 8y1a by Molmil
1up-1 conformation of HKU1-B S protein after incubation of the receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Xia, L.Y, Zhang, Y.Y, Zhou, Q.
Deposit date:2024-01-24
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis for the recognition of HCoV-HKU1 by human TMPRSS2.
Cell Res., 2024

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon