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1DO8
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CRYSTAL STRUCTURE OF A CLOSED FORM OF HUMAN MITOCHONDRIAL NAD(P)+-DEPENDENT MALIC ENZYME
分子名称: MALIC ENZYME, MANGANESE (II) ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Yang, Z, Floyd, D.L, Loeber, G, Tong, L.
登録日1999-12-19
公開日2000-03-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a closed form of human malic enzyme and implications for catalytic mechanism.
Nat.Struct.Biol., 7, 2000
1EFL
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HUMAN MALIC ENZYME IN A QUATERNARY COMPLEX WITH NAD, MG, AND TARTRONATE
分子名称: MAGNESIUM ION, MALIC ENZYME, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Yang, Z, Floyd, D.L, Loeber, G, Tong, L.
登録日2000-02-09
公開日2000-03-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of a closed form of human malic enzyme and implications for catalytic mechanism.
Nat.Struct.Biol., 7, 2000
1EI3
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BU of 1ei3 by Molmil
CRYSTAL STRUCTURE OF NATIVE CHICKEN FIBRINOGEN
分子名称: FIBRINOGEN
著者Yang, Z, Mochalkin, I, Veerapandian, L, Riley, M, Doolittle, R.F.
登録日2000-02-23
公開日2000-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (5.5 Å)
主引用文献Crystal structure of native chicken fibrinogen at 5.5-A resolution.
Proc.Natl.Acad.Sci.USA, 97, 2000
1EFK
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BU of 1efk by Molmil
STRUCTURE OF HUMAN MALIC ENZYME IN COMPLEX WITH KETOMALONATE
分子名称: ALPHA-KETOMALONIC ACID, MAGNESIUM ION, MALIC ENZYME, ...
著者Yang, Z, Floyd, D.L, Loeber, G, Tong, L.
登録日2000-02-09
公開日2000-03-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of a closed form of human malic enzyme and implications for catalytic mechanism.
Nat.Struct.Biol., 7, 2000
1GQ2
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BU of 1gq2 by Molmil
Malic Enzyme from Pigeon Liver
分子名称: CHLORIDE ION, MALIC ENZYME, MANGANESE (II) ION, ...
著者Yang, Z, Zhang, H, Liang, T.
登録日2001-11-19
公開日2002-05-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Studies of the Pigeon Cytosolic Nadp+ -Dependent Malic Enzyme
Protein Sci., 11, 2002
1GZ4
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molecular mechanism of the regulation of human mitochondrial NAD(P)+-dependent malic enzyme by ATP and fumarate
分子名称: ADENOSINE-5'-TRIPHOSPHATE, FUMARIC ACID, MANGANESE (II) ION, ...
著者Yang, Z, Lanks, C.W, Tong, L.
登録日2002-05-15
公開日2002-07-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Molecular Mechanism for the Regulation of Human Mitochondrial Nad(P)(+)-Dependent Malic Enzyme by ATP and Fumarate
Structure, 10, 2002
1H2H
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BU of 1h2h by Molmil
Crystal structure of TM1643
分子名称: HYPOTHETICAL PROTEIN TM1643, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yang, Z, Savchenko, A, Edwards, A, Arrowsmith, C, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2002-08-08
公開日2002-08-15
最終更新日2019-08-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Aspartate dehydrogenase, a novel enzyme identified from structural and functional studies of TM1643.
J. Biol. Chem., 278, 2003
1M1J
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Crystal structure of native chicken fibrinogen with two different bound ligands
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Yang, Z, Kollman, J.M, Pandi, L, Doolittle, R.F.
登録日2002-06-19
公開日2002-06-26
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of Native Chicken Fibrinogen at 2.7 A Resolution
Biochemistry, 40, 2001
1N86
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Crystal structure of human D-dimer from cross-linked fibrin complexed with GPR and GHRPLDK peptide ligands.
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, CALCIUM ION, Fibrin alpha/alpha-E chain, ...
著者Yang, Z, Pandi, L, Doolittle, R.F.
登録日2002-11-19
公開日2003-01-07
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The crystal structure of fragment double-D from cross-linked lamprey fibrin reveals isopeptide linkages across an unexpected D-D interface.
Biochemistry, 41, 2002
1GZ3
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Molecular mechanism for the regulation of human mitochondrial NAD(P)+-dependent malic enzyme by ATP and fumarate
分子名称: ADENOSINE-5'-TRIPHOSPHATE, FUMARIC ACID, MANGANESE (II) ION, ...
著者Yang, Z, Lanks, C.W, Tong, L.
登録日2002-05-14
公開日2003-05-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular Mechanism for the Regulation of Human Mitochondrial Nad(P)+-Dependent Malic Enzyme by ATP and Fumarate
Structure, 10, 2002
1LWU
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BU of 1lwu by Molmil
Crystal structure of fragment D from lamprey fibrinogen complexed with the peptide Gly-His-Arg-Pro-amide
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yang, Z, Spraggon, G, Pandi, L, Everse, S.J, Riley, M, Doolittle, R.F.
登録日2002-06-03
公開日2002-08-23
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of fragment D from lamprey fibrinogen complexed with the peptide Gly-His-Arg-Pro-amide.
Biochemistry, 41, 2002
2LUH
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BU of 2luh by Molmil
NMR structure of the Vta1-Vps60 complex
分子名称: Vacuolar protein sorting-associated protein VTA1, Vacuolar protein-sorting-associated protein 60
著者Yang, Z, Vild, C, Ju, J, Zhang, X, Liu, J, Shen, J, Zhao, B, Lan, W, Gong, F, Liu, M, Cao, C, Xu, Z.
登録日2012-06-13
公開日2012-11-07
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural Basis of Molecular Recognition between ESCRT-III-like Protein Vps60 and AAA-ATPase Regulator Vta1 in the Multivesicular Body Pathway.
J.Biol.Chem., 287, 2012
1N8E
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BU of 1n8e by Molmil
Fragment Double-D from Human Fibrin
分子名称: Fibrin alpha/alpha-E chain, Fibrin beta chain, Fibrin gamma chain
著者Yang, Z, Pandi, L, Doolittle, R.F.
登録日2002-11-20
公開日2003-01-07
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献The Crystal Structure of Fragment Double-D from Cross-Linked Lamprey Fibrin Reveals Isopeptide Linkages across an Unexpected D-D Interface
Biochemistry, 41, 2002
1N73
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Fibrin D-Dimer, Lamprey complexed with the PEPTIDE LIGAND: GLY-HIS-ARG-PRO-AMIDE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Fibrin alpha-1 chain, ...
著者Yang, Z, Pandi, L, Doolittle, R.F.
登録日2002-11-12
公開日2003-01-07
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The Crystal structure of fragment double-D from cross-linked lamprey fibrin reveals isopeptide linkages across an unexpected D-D interface
Biochemistry, 41, 2002
1Q0S
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BU of 1q0s by Molmil
Binary Structure of T4DAM with AdoHcy
分子名称: DNA adenine methylase, S-ADENOSYL-L-HOMOCYSTEINE
著者Yang, Z, Horton, J.R, Zhou, L, Zhang, X.J, Dong, A, Zhang, X, Schlagman, S.L, Kossykh, V, Hattman, S, Cheng, X.
登録日2003-07-17
公開日2003-09-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the bacteriophage T4 DNA adenine methyltransferase
Nat.Struct.Biol., 10, 2003
1PJL
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BU of 1pjl by Molmil
Crystal structure of human m-NAD-ME in ternary complex with NAD and Lu3+
分子名称: LUTETIUM (III) ION, NAD-dependent malic enzyme, mitochondrial, ...
著者Yang, Z, Batra, R, Floyd, D.L, Hung, H.-C, Chang, G.-G, Tong, L.
登録日2003-06-03
公開日2003-06-17
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Potent and competitive inhibition of malic enzymes by lanthanide ions
Biochem.Biophys.Res.Commun., 274, 2000
1Q0T
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BU of 1q0t by Molmil
Ternary Structure of T4DAM with AdoHcy and DNA
分子名称: 5'-D(*AP*CP*AP*GP*GP*AP*TP*CP*CP*TP*GP*T)-3', DNA adenine methylase, IODIDE ION, ...
著者Yang, Z, Horton, J.R, Zhou, L, Zhang, X.J, Dong, A, Zhang, X, Schlagman, S.L, Kossykh, V, Hattman, S, Cheng, X.
登録日2003-07-17
公開日2003-09-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of the bacteriophage T4 DNA adenine methyltransferase
Nat.Struct.Biol., 10, 2003
3D2U
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Structure of UL18, a Peptide-Binding Viral MHC Mimic, Bound to a Host Inhibitory Receptor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Actin, Beta-2-microglobulin, ...
著者Yang, Z, Bjorkman, P.J.
登録日2008-05-08
公開日2008-07-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structure of UL18, a peptide-binding viral MHC mimic, bound to a host inhibitory receptor
Proc.Natl.Acad.Sci.Usa, 105, 2008
7RYU
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BU of 7ryu by Molmil
Anti-HIV neutralizing antibody Ab1303 Fab isolated from sequentially immunized mcaques
分子名称: Ab1303 Fab heavy chain, Ab1303 Fab light chain
著者Yang, Z, Bjorkman, P.J.
登録日2021-08-26
公開日2022-01-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Neutralizing antibodies induced in immunized macaques recognize the CD4-binding site on an occluded-open HIV-1 envelope trimer.
Nat Commun, 13, 2022
7RYV
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BU of 7ryv by Molmil
Anti-HIV neutralizing antibody Ab1573 Fab isolated from sequentially immunized macaques
分子名称: Ab1573 Fab heavy chain, Ab1573 Fab light chain
著者Yang, Z, Bjorkman, P.J.
登録日2021-08-26
公開日2022-01-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Neutralizing antibodies induced in immunized macaques recognize the CD4-binding site on an occluded-open HIV-1 envelope trimer.
Nat Commun, 13, 2022
1T43
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Crystal Structure Analysis of E.coli Protein (N5)-Glutamine Methyltransferase (HemK)
分子名称: Protein methyltransferase hemK, S-ADENOSYL-L-HOMOCYSTEINE
著者Yang, Z, Shipman, L, Zhang, M, Anton, B.P, Roberts, R.J, Cheng, X.
登録日2004-04-28
公開日2004-06-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural characterization and comparative phylogenetic analysis of Escherichia coli HemK, a protein (N5)-glutamine methyltransferase.
J.Mol.Biol., 340, 2004
8D5C
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anti-HIV-1 gp120-sCD4 complex antibody CG10 Fab in complex with B41-sCD4
分子名称: CG10 Fab heavy chain, CG10 Fab light chain, Envelope glycoprotein gp160, ...
著者Yang, Z, Bjorkman, P.J, Gershoni, J.M.
登録日2022-06-04
公開日2022-11-16
最終更新日2023-01-04
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Antibody Recognition of CD4-Induced Open HIV-1 Env Trimers.
J.Virol., 96, 2022
8D54
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anti HIV gp120/CD4 complex antibody CG10 Fab
分子名称: CG10 Fab heavy chain, CG10 Fab light chain
著者Yang, Z, Bjorkman, P.J.
登録日2022-06-03
公開日2022-12-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Antibody Recognition of CD4-Induced Open HIV-1 Env Trimers.
J.Virol., 96, 2022
3IT8
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Crystal structure of TNF alpha complexed with a poxvirus MHC-related TNF binding protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2L protein, Tumor necrosis factor
著者Yang, Z, West Jr, A.P, Bjorkman, P.J.
登録日2009-08-27
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of TNFalpha complexed with a poxvirus MHC-related TNF binding protein
Nat.Struct.Mol.Biol., 16, 2009
1YNM
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Crystal structure of restriction endonuclease HinP1I
分子名称: R.HinP1I restriction endonuclease
著者Yang, Z, Horton, J.R, Maunus, R, Wilson, G.G, Roberts, R.J, Cheng, X.
登録日2005-01-24
公開日2005-05-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure of HinP1I endonuclease reveals a striking similarity to the monomeric restriction enzyme MspI
Nucleic Acids Res., 33, 2005

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