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2FII
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BU of 2fii by Molmil
Crystal Structure Analysis of the B-DNA Dodecamer CGCGAAT-aU-CGCG, with Incorporated Arabino-Uridin (aU)
分子名称: 5'-D(*CP*GP*CP*GP*AP*AP*TP*(UAR)P*CP*GP*CP*G)-3', MAGNESIUM ION
著者Egli, M, Li, F.
登録日2005-12-29
公開日2006-05-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献2'-Fluoroarabino- and arabinonucleic acid show different conformations, resulting in deviating RNA affinities and processing of their heteroduplexes with RNA by RNase H.
Biochemistry, 45, 2006
2FIJ
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Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-aU-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and Arabino-Uridine (aU)
分子名称: 5'-D(*GP*CP*GP*TP*(A2M)P*(UAR)P*AP*CP*GP*C)-3', CHLORIDE ION, COBALT HEXAMMINE(III)
著者Egli, M, Li, F.
登録日2005-12-29
公開日2006-05-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献2'-Fluoroarabino- and arabinonucleic acid show different conformations, resulting in deviating RNA affinities and processing of their heteroduplexes with RNA by RNase H.
Biochemistry, 45, 2006
2FIL
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BU of 2fil by Molmil
Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-faT-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and 2'-Fluoroarabino-Thymidine (faT)
分子名称: 5'-D(*GP*CP*GP*TP*(A2M)P*(TAF)P*AP*CP*GP*C)-3', COBALT HEXAMMINE(III)
著者Egli, M, Li, F.
登録日2005-12-29
公開日2006-05-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献2'-Fluoroarabino- and arabinonucleic acid show different conformations, resulting in deviating RNA affinities and processing of their heteroduplexes with RNA by RNase H.
Biochemistry, 45, 2006
2HSD
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BU of 2hsd by Molmil
THE REFINED THREE-DIMENSIONAL STRUCTURE OF 3ALPHA,20BETA-HYDROXYSTEROID DEHYDROGENASE AND POSSIBLE ROLES OF THE RESIDUES CONSERVED IN SHORT-CHAIN DEHYDROGENASES
分子名称: 3-ALPHA, 20 BETA-HYDROXYSTEROID DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Ghosh, D, Duax, W.L.
登録日1994-03-28
公開日1994-08-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献The refined three-dimensional structure of 3 alpha,20 beta-hydroxysteroid dehydrogenase and possible roles of the residues conserved in short-chain dehydrogenases.
Structure, 2, 1994
8DGE
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BU of 8dge by Molmil
BoGH13ASus from Bacteroides ovatus
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, Alpha amylase, ...
著者Brown, H.A, DeVeaux, A.L, Koropatkin, N.M.
登録日2022-06-23
公開日2023-05-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献BoGH13A Sus from Bacteroides ovatus represents a novel alpha-amylase used for Bacteroides starch breakdown in the human gut.
Cell.Mol.Life Sci., 80, 2023
8DL1
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BU of 8dl1 by Molmil
BoGH13ASus-E523Q from Bacteroides ovatus bound to maltoheptaose
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Alpha amylase, ...
著者Brown, H.A, DeVeaux, A.L, Koropatkin, N.M.
登録日2022-07-06
公開日2023-05-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献BoGH13A Sus from Bacteroides ovatus represents a novel alpha-amylase used for Bacteroides starch breakdown in the human gut.
Cell.Mol.Life Sci., 80, 2023
8DL2
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BoGH13ASus from Bacteroides ovatus bound to acarbose
分子名称: 1,2-ETHANEDIOL, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Brown, H.A, DeVeaux, A.L, Koropatkin, N.M.
登録日2022-07-06
公開日2023-05-24
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献BoGH13A Sus from Bacteroides ovatus represents a novel alpha-amylase used for Bacteroides starch breakdown in the human gut.
Cell.Mol.Life Sci., 80, 2023
6WN5
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BU of 6wn5 by Molmil
1.52 Angstrom Resolution Crystal Structure of Transcriptional Regulator HdfR from Klebsiella pneumoniae
分子名称: CHLORIDE ION, Transcriptional regulator HdfR
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-04-22
公開日2020-05-06
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
6WN8
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2.70 Angstrom Resolution Crystal Structure of Uracil Phosphoribosyl Transferase from Klebsiella pneumoniae
分子名称: CHLORIDE ION, SULFATE ION, Uracil phosphoribosyltransferase, ...
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-04-22
公開日2020-05-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
6X1L
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BU of 6x1l by Molmil
The crystal structure of a functional uncharacterized protein KP1_0663 from Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044
分子名称: WbbZ protein
著者Tan, K, Wu, R, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-05-19
公開日2020-06-03
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
6X3K
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BU of 6x3k by Molmil
Hsa Siglec and Unique domains in complex with 6S-sialy-Lewisx
分子名称: N-acetyl-alpha-neuraminic acid, SODIUM ION, Streptococcal hemagglutinin, ...
著者Stubbs, H.E, Iverson, T.M.
登録日2020-05-21
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation.
Nat Commun, 13, 2022
6X3Q
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BU of 6x3q by Molmil
Hsa Siglec and Unique domains in complex with 3'sialyl-N-acetyllactosamine trisaccharide
分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, Streptococcal hemagglutinin
著者Stubbs, H.E, Iverson, T.M.
登録日2020-05-21
公開日2021-11-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation.
Nat Commun, 13, 2022
6V0A
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BU of 6v0a by Molmil
Crystal structure of cytochrome c nitrite reductase from the bacterium Geobacter lovleyi with bound sulfate
分子名称: HEME C, Nitrite reductase (cytochrome; ammonia-forming), SULFATE ION
著者Satyanarayana, L, Campecino, J, Hegg, L.H, Hu, J.
登録日2019-11-18
公開日2020-06-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Cytochromecnitrite reductase from the bacteriumGeobacter lovleyirepresents a new NrfA subclass.
J.Biol.Chem., 295, 2020
5KZH
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BU of 5kzh by Molmil
High Resolution Structure of Acinetobacter baumannii beta-lactamase OXA-51
分子名称: ACETATE ION, Beta-lactamase, FORMIC ACID
著者June, C.M, Powers, R.A, Leonard, D.A.
登録日2016-07-25
公開日2016-08-17
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献The structure of a doripenem-bound OXA-51 class D beta-lactamase variant with enhanced carbapenemase activity.
Protein Sci., 25, 2016
5L2F
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BU of 5l2f by Molmil
High Resolution Structure of Acinetobacter baumannii beta-lactamase OXA-51 I129L/K83D bound to doripenem
分子名称: (4R,5S)-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-3-({(3S,5S)-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl}sulfanyl)-4,5-dihydro-1H-pyrrole-2-carboxylic acid, ACETATE ION, Beta-lactamase, ...
著者June, C.M, Powers, R.A, Leonard, D.A, Muckenthaler, T.
登録日2016-08-01
公開日2016-09-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The structure of a doripenem-bound OXA-51 class D beta-lactamase variant with enhanced carbapenemase activity.
Protein Sci., 25, 2016
4W8K
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BU of 4w8k by Molmil
Crystal structure of a putative Cas1 enzyme from Vibrio phage ICP1
分子名称: Cas1 protein, POTASSIUM ION
著者Stogios, P.J, Wawrzak, Z, Onopriyeno, O, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-08-25
公開日2014-09-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献To be published
To Be Published
3UWD
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BU of 3uwd by Molmil
Crystal Structure of Phosphoglycerate Kinase from Bacillus Anthracis
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, MAGNESIUM ION, ...
著者Zheng, H, Chruszcz, M, Porebski, P, Kudritska, M, Grimshaw, S, Savchenko, A, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-12-01
公開日2012-01-11
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Crystal structures of putative phosphoglycerate kinases from B. anthracis and C. jejuni.
J.Struct.Funct.Genom., 13, 2012
7KMJ
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BU of 7kmj by Molmil
Hsa Siglec and Unique domains in complex with Sialyl Lewis C
分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, Streptococcal hemagglutinin
著者Stubbs, H.E, Iverson, T.M.
登録日2020-11-03
公開日2022-05-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation.
Nat Commun, 13, 2022
2XKX
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Single particle analysis of PSD-95 in negative stain
分子名称: DISKS LARGE HOMOLOG 4
著者Fomina, S, Howard, T.D, Sleator, O.K, Golovanova, M, O'Ryan, L, Leyland, M.L, Grossmann, J.G, Collins, R.F, Prince, S.M.
登録日2010-07-15
公開日2011-07-20
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (22.9 Å), SOLUTION SCATTERING
主引用文献Self-Directed Assembly and Clustering of the Cytoplasmic Domains of Inwardly Rectifying Kir2.1 Potassium Channels on Association with Psd-95
Biochim.Biophys.Acta, 1808, 2011
7RJJ
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Crystal Structure of the Peptidoglycan Binding Domain of the Outer Membrane Protein (OmpA) from Klebsiella pneumoniae with bound D-alanine
分子名称: CHLORIDE ION, D-ALANINE, OmpA family protein
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-07-21
公開日2021-07-28
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
7RAW
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BU of 7raw by Molmil
Domain 1 of Starch adherence system protein 20 (Sas20) from Ruminococcus bromii
分子名称: DI(HYDROXYETHYL)ETHER, Dockerin domain-containing protein, TRIETHYLENE GLYCOL
著者Cerqueira, F.M, Koropatkin, N.M.
登録日2021-07-04
公開日2022-04-13
最終更新日2022-05-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Sas20 is a highly flexible starch-binding protein in the Ruminococcus bromii cell-surface amylosome.
J.Biol.Chem., 298, 2022
7RFT
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Domain 1 of Starch adherence system protein 20 (Sas20) from Ruminococcus bromii with maltotriose
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Dockerin domain-containing protein, ...
著者Koropatkin, N, Cerqueira, F.
登録日2021-07-14
公開日2022-04-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Sas20 is a highly flexible starch-binding protein in the Ruminococcus bromii cell-surface amylosome.
J.Biol.Chem., 298, 2022
7RPY
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X25-2 domain of Sca5 from Ruminococcus bromii
分子名称: ACETATE ION, Cohesin-containing protein, GLYCEROL, ...
著者Cerqueira, F, Koropatkin, N.
登録日2021-08-04
公開日2022-04-13
最終更新日2022-05-25
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Sas20 is a highly flexible starch-binding protein in the Ruminococcus bromii cell-surface amylosome.
J.Biol.Chem., 298, 2022
7TL5
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BU of 7tl5 by Molmil
Crystal structure of putative hydrolase yjcS from Klebsiella pneumoniae.
分子名称: 1,2-ETHANEDIOL, Lactamase_B domain-containing protein
著者Chang, C, Endres, M, Wu, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2022-01-18
公開日2022-02-02
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
7T9Z
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Human Ornithine Aminotransferase (hOAT) crystallized at pH 6.0
分子名称: Ornithine aminotransferase, mitochondrial, PYRIDOXAL-5'-PHOSPHATE
著者Butrin, A, Liu, D.
登録日2021-12-20
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Determination of the pH dependence, substrate specificity, and turnovers of alternative substrates for human ornithine aminotransferase.
J.Biol.Chem., 298, 2022

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