Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3VYO
DownloadVisualize
BU of 3vyo by Molmil
Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2 N140 truncation mutant (resideus 140-408)
Descriptor: Probable conserved lipoprotein LPPS
Authors:Li, W.J, Li, D.F, Bi, L.J, Wang, D.C.
Deposit date:2012-09-30
Release date:2013-06-19
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of L,D-transpeptidase LdtMt2 in complex with meropenem reveals the mechanism of carbapenem against Mycobacterium tuberculosis
Cell Res., 23, 2013
3VSG
DownloadVisualize
BU of 3vsg by Molmil
Crystal structure of iron free 1,6-APD, 2-Animophenol-1,6-Dioxygenase
Descriptor: 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit, 2-amino-5-chlorophenol 1,6-dioxygenase beta subunit
Authors:Li, D.F, Hou, Y.J, Hu, Y, Wang, D.C, Liu, W.
Deposit date:2012-04-25
Release date:2013-01-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of aminophenol dioxygenase in complex with intermediate, product and inhibitor
Acta Crystallogr.,Sect.D, 69, 2013
3VSI
DownloadVisualize
BU of 3vsi by Molmil
Crystal structure of native 1,6-APD (2-Animophenol-1,6-dioxygenase) complex with 4-Nitrocatechol
Descriptor: 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit, 2-amino-5-chlorophenol 1,6-dioxygenase beta subunit, 4-NITROCATECHOL, ...
Authors:Li, D.F, Hou, Y.J, Hu, Y, Wang, D.C, Liu, W.
Deposit date:2012-04-25
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of aminophenol dioxygenase in complex with intermediate, product and inhibitor
Acta Crystallogr.,Sect.D, 69, 2013
3VSJ
DownloadVisualize
BU of 3vsj by Molmil
Crystal structure of 1,6-APD (2-ANIMOPHENOL-1,6-DIOXYGENASE) complexed with intermediate products
Descriptor: (2Z,4Z)-2-imino-6-oxohex-4-enoic acid, (3E)-3-iminooxepin-2(3H)-one, 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit, ...
Authors:Li, D.F, Hou, Y.J, Hu, Y, Wang, D.C, Liu, W.
Deposit date:2012-04-25
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of aminophenol dioxygenase in complex with intermediate, product and inhibitor
Acta Crystallogr.,Sect.D, 69, 2013
3VYN
DownloadVisualize
BU of 3vyn by Molmil
Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2 N55 truncation mutant (resideus 55-408)
Descriptor: Probable conserved lipoprotein LPPS
Authors:Li, W.J, Li, D.F, Bi, L.J, Wang, D.C.
Deposit date:2012-09-30
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of L,D-transpeptidase LdtMt2 in complex with meropenem reveals the mechanism of carbapenem against Mycobacterium tuberculosis
Cell Res., 23, 2013
3VYP
DownloadVisualize
BU of 3vyp by Molmil
Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2-N140 adduct with meropenem
Descriptor: (2S,3R,4S)-4-{[(3S,5R)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid, GLYCEROL, Probable conserved lipoprotein LPPS
Authors:Li, W.J, Li, D.F, Bi, L.J, Wang, D.C.
Deposit date:2012-09-30
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of L,D-transpeptidase LdtMt2 in complex with meropenem reveals the mechanism of carbapenem against Mycobacterium tuberculosis
Cell Res., 23, 2013
3VSH
DownloadVisualize
BU of 3vsh by Molmil
Crystal structure of native 1,6-APD (with Iron), 2-Animophenol-1,6-Dioxygenase
Descriptor: 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit, 2-amino-5-chlorophenol 1,6-dioxygenase beta subunit, FE (II) ION
Authors:Li, D.F, Hou, Y.J, Hu, Y, Wang, D.C, Liu, W.
Deposit date:2012-04-25
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of aminophenol dioxygenase in complex with intermediate, product and inhibitor
Acta Crystallogr.,Sect.D, 69, 2013
3WE5
DownloadVisualize
BU of 3we5 by Molmil
Crystal structure of ubiquitin conjugating enzyme E2 UbcA1 from Agrocybe aegerita
Descriptor: ACETIC ACID, GLYCEROL, Ubiquitin conjugating enzyme
Authors:Li, D.F, Feng, L, Wang, D.C, Liu, W.
Deposit date:2013-07-01
Release date:2014-07-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of ubiquitin conjugating enzyme E2 UbcA1 from Agrocybe aegerita
To be Published
3WBM
DownloadVisualize
BU of 3wbm by Molmil
Crystal Structure of protein-RNA complex
Descriptor: DNA/RNA-binding protein Alba 1, RNA (25-MER)
Authors:Ding, J, Wang, D.C.
Deposit date:2013-05-20
Release date:2013-12-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biochemical and structural insights into RNA binding by Ssh10b, a member of the highly conserved Sac10b protein family in Archaea.
J.Biol.Chem., 289, 2014
3WY7
DownloadVisualize
BU of 3wy7 by Molmil
Crystal structure of Mycobacterium smegmatis 7-Keto-8-aminopelargonic acid (KAPA) synthase BioF
Descriptor: 8-amino-7-oxononanoate synthase
Authors:Fan, S.H, Li, D.F, Wang, D.C, Chen, G.J, Zhang, X.E, Bi, L.J.
Deposit date:2014-08-20
Release date:2014-12-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and function of Mycobacterium smegmatis 7-keto-8-aminopelargonic acid (KAPA) synthase
Int.J.Biochem.Cell Biol., 58C, 2014
3GAS
DownloadVisualize
BU of 3gas by Molmil
Crystal Structure of Helicobacter pylori Heme Oxygenase Hugz in Complex with Heme
Descriptor: 1,2-ETHANEDIOL, AZIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Jiang, F, Hu, Y.L, Guo, Y, Guo, G, Zou, Q.M, Wang, D.C.
Deposit date:2009-02-18
Release date:2010-02-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Helicobacter pylori Heme Oxygenase Hugz in Complex with Heme
To be Published
3A0D
DownloadVisualize
BU of 3a0d by Molmil
Crystal Structure of Polygonatum cyrtonema lectin (PCL) complexed with monomannoside
Descriptor: Mannose/sialic acid-binding lectin, SULFATE ION, methyl alpha-D-mannopyranoside
Authors:Ding, J, Wang, D.C.
Deposit date:2009-03-16
Release date:2010-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of a novel anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua with unique ligand-binding property and super-structure
J.Struct.Biol., 171, 2010
3AQS
DownloadVisualize
BU of 3aqs by Molmil
Crystal structure of RolR (NCGL1110) without ligand
Descriptor: Bacterial regulatory proteins, tetR family
Authors:Li, D.F, Zhang, N, Hou, Y.J, Liu, S.J, Wang, D.C.
Deposit date:2010-11-18
Release date:2011-07-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystal structures of the transcriptional repressor RolR reveals a novel recognition mechanism between inducer and regulator.
Plos One, 6, 2011
3AQT
DownloadVisualize
BU of 3aqt by Molmil
CRYSTAL STRUCTURE OF RolR (NCGL1110) complex WITH ligand RESORCINOL
Descriptor: Bacterial regulatory proteins, tetR family, RESORCINOL
Authors:Li, D.F, Zhang, N, Hou, Y.J, Liu, S.J, Wang, D.C.
Deposit date:2010-11-18
Release date:2011-07-06
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of the transcriptional repressor RolR reveals a novel recognition mechanism between inducer and regulator.
Plos One, 6, 2011
3AYA
DownloadVisualize
BU of 3aya by Molmil
Crystal structure of galectin-3 CRD domian complexed with Thomsen-Friedenreich antigen
Descriptor: Galectin-3, SULFATE ION, THREONINE, ...
Authors:Bian, C.F, Li, D.F, Wang, D.C.
Deposit date:2011-05-04
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for distinct binding properties of the human galectins to thomsen-friedenreich antigen
Plos One, 6, 2011
3AYD
DownloadVisualize
BU of 3ayd by Molmil
Crystal structure of galectin-3 CRD domian complexed with TFN
Descriptor: Galectin-3, P-NITROPHENOL, SULFATE ION, ...
Authors:Bian, C.F, Li, D.F, Wang, D.C.
Deposit date:2011-05-04
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for distinct binding properties of the human galectins to thomsen-friedenreich antigen
Plos One, 6, 2011
3AYC
DownloadVisualize
BU of 3ayc by Molmil
Crystal structure of galectin-3 CRD domian complexed with GM1 pentasaccharide
Descriptor: BETA-MERCAPTOETHANOL, GLYCEROL, Galectin-3, ...
Authors:Bian, C.F, Li, D.F, Wang, D.C.
Deposit date:2011-05-04
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for distinct binding properties of the human galectins to thomsen-friedenreich antigen
Plos One, 6, 2011
3AYE
DownloadVisualize
BU of 3aye by Molmil
Crystal structure of galectin-3 CRD domian complexed with lactose
Descriptor: Galectin-3, SULFATE ION, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Bian, C.F, Li, D.F, Wang, D.C.
Deposit date:2011-05-04
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for distinct binding properties of the human galectins to thomsen-friedenreich antigen
Plos One, 6, 2011
2P1W
DownloadVisualize
BU of 2p1w by Molmil
structure of the phosphothreonine lyase SpvC, the effector protein from Salmonella
Descriptor: 27.5 kDa virulence protein
Authors:Zhu, Y, Wang, D.C, Shao, F.
Deposit date:2007-03-06
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the enzymatic mechanism of the pathogenic MAPK phosphothreonine lyase.
Mol.Cell, 28, 2007
1T0Z
DownloadVisualize
BU of 1t0z by Molmil
Structure of an Excitatory Insect-specific Toxin with an Analgesic Effect on Mammalian from Scorpion Buthus martensii Karsch
Descriptor: SULFATE ION, insect neurotoxin
Authors:Li, C, Guan, R.-J, Xiang, Y, Zhang, Y, Wang, D.-C.
Deposit date:2004-04-14
Release date:2004-12-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of an excitatory insect-specific toxin with an analgesic effect on mammals from the scorpion Buthus martensii Karsch.
Acta Crystallogr.,Sect.D, 61, 2005
3A9U
DownloadVisualize
BU of 3a9u by Molmil
Crystal structures and enzymatic mechanisms of a Populus tomentosa 4-coumarate--CoA ligase
Descriptor: 4-coumarate--CoA ligase
Authors:Hu, Y.
Deposit date:2009-11-06
Release date:2010-09-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of a Populus tomentosa 4-coumarate:CoA ligase shed light on its enzymatic mechanisms
Plant Cell, 22, 2010
7DCJ
DownloadVisualize
BU of 7dcj by Molmil
Crystal structure of HSF1 DNA-binding domain in complex with 2-site HSE DNA in the head-to-head orientation
Descriptor: DNA (5'-D(*GP*CP*CP*GP*AP*AP*TP*AP*TP*TP*CP*GP*G)-3'), Heat shock factor protein 1, SODIUM ION
Authors:Feng, N, Liu, W.
Deposit date:2020-10-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Structures of heat shock factor trimers bound to DNA.
Iscience, 24, 2021
7DCU
DownloadVisualize
BU of 7dcu by Molmil
Crystal structure of HSF2 DNA-binding domain in complex with 3-site HSE DNA (21 bp)
Descriptor: DNA (5'-D(*AP*CP*CP*GP*CP*GP*AP*AP*TP*AP*TP*TP*CP*TP*AP*GP*AP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*TP*CP*TP*AP*GP*AP*AP*TP*AP*TP*TP*CP*GP*CP*GP*G)-3'), Heat shock factor protein 2, ...
Authors:Feng, N, Liu, W.
Deposit date:2020-10-27
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures of heat shock factor trimers bound to DNA.
Iscience, 24, 2021
7DCT
DownloadVisualize
BU of 7dct by Molmil
Crystal structure of HSF1 DNA-binding domain in complex with 3-site HSE DNA (24 bp)
Descriptor: DNA (5'-D(*AP*CP*TP*CP*GP*CP*GP*AP*AP*TP*AP*TP*TP*CP*TP*AP*GP*AP*AP*CP*GP*CP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*GP*CP*GP*TP*TP*CP*TP*AP*GP*AP*AP*TP*AP*TP*TP*CP*GP*CP*GP*AP*G)-3'), Heat shock factor protein 1, ...
Authors:Feng, N, Liu, W.
Deposit date:2020-10-27
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structures of heat shock factor trimers bound to DNA.
Iscience, 24, 2021
7DCS
DownloadVisualize
BU of 7dcs by Molmil
Crystal structure of HSF1 DNA-binding domain in complex with 3-site HSE DNA (23 bp)
Descriptor: DNA (5'-D(*AP*TP*CP*CP*GP*CP*GP*AP*AP*TP*AP*TP*TP*CP*TP*AP*GP*AP*AP*CP*GP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*CP*GP*TP*TP*CP*TP*AP*GP*AP*AP*TP*AP*TP*TP*CP*GP*CP*GP*GP*A)-3'), Heat shock factor protein 1, ...
Authors:Feng, N, Liu, W.
Deposit date:2020-10-27
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of heat shock factor trimers bound to DNA.
Iscience, 24, 2021

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon