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2KED
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BU of 2ked by Molmil
Structure of SDF-1/CXCL12
Descriptor: Stromal cell-derived factor 1-alpha
Authors:Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
Deposit date:2009-01-28
Release date:2009-09-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Monomeric structure of the cardioprotective chemokine SDF-1/CXCL12
Protein Sci., 18, 2009
2KEC
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BU of 2kec by Molmil
Structure of SDF-1/CXCL12
Descriptor: Stromal cell-derived factor 1-alpha
Authors:Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
Deposit date:2009-01-28
Release date:2009-09-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Monomeric structure of the cardioprotective chemokine SDF-1/CXCL12
Protein Sci., 18, 2009
2KOM
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BU of 2kom by Molmil
Solution structure of humar Par-3b PDZ2 (residues 451-549)
Descriptor: Partitioning defective 3 homolog
Authors:Volkman, B.F, Tyler, R.C, Peterson, F.C, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-09-24
Release date:2009-11-10
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Rapid, robotic, small-scale protein production for NMR screening and structure determination.
Protein Sci., 19, 2010
2KEE
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BU of 2kee by Molmil
Structure of SDF-1/CXCL12
Descriptor: Stromal cell-derived factor 1-alpha
Authors:Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
Deposit date:2009-01-28
Release date:2009-09-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Monomeric structure of the cardioprotective chemokine SDF-1/CXCL12
Protein Sci., 18, 2009
2LGR
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BU of 2lgr by Molmil
Solution structure of human protein C6orf130, a putative macro domain
Descriptor: Uncharacterized protein C6orf130
Authors:Volkman, B.F, Lytle, B.L, Peterson, F.C, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2011-08-01
Release date:2011-08-17
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Orphan Macrodomain Protein (Human C6orf130) Is an O-Acyl-ADP-ribose Deacylase: SOLUTION STRUCTURE AND CATALYTIC PROPERTIES.
J.Biol.Chem., 286, 2011
2LC6
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BU of 2lc6 by Molmil
Solution structure of Par-6 Q144C/L164C
Descriptor: Par-6
Authors:Volkman, B.F, Whitney, D.S, Peterson, F.C.
Deposit date:2011-04-25
Release date:2011-11-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A Conformational Switch in the CRIB-PDZ Module of Par-6.
Structure, 19, 2011
2L48
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BU of 2l48 by Molmil
Solution structure of the PlyG cell wall binding domain
Descriptor: N-acetylmuramoyl-L-alanine amidase
Authors:Volkman, B.F, Dias, J.S, Peterson, F.C.
Deposit date:2010-10-01
Release date:2011-10-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Tbd
To be Published
2LC7
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BU of 2lc7 by Molmil
Solution structure of the isolated Par-6 PDZ domain
Descriptor: Par-6
Authors:Volkman, B.F, Whitney, D.S, Peterson, F.C.
Deposit date:2011-04-25
Release date:2011-11-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A Conformational Switch in the CRIB-PDZ Module of Par-6.
Structure, 19, 2011
2L47
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BU of 2l47 by Molmil
Solution structure of the PlyG catalytic domain
Descriptor: N-acetylmuramoyl-L-alanine amidase, ZINC ION
Authors:Volkman, B.F, Dias, J.S, Peterson, F.C.
Deposit date:2010-10-01
Release date:2011-10-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Tbd
To be Published
2LWX
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BU of 2lwx by Molmil
Solution structure of the C-terminal Pdr1-activating domain of the J-protein Zuo1
Descriptor: Zuotin
Authors:Volkman, B.F, Ducett, J.K, Peterson, F.C, Craig, E.A.
Deposit date:2012-08-08
Release date:2012-10-03
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Unfolding of the C-terminal domain of the j-protein zuo1 releases autoinhibition and activates pdr1-dependent transcription.
J.Mol.Biol., 425, 2013
2KOH
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BU of 2koh by Molmil
NMR structure of mouse Par3-PDZ3 in complex with VE-Cadherin C-terminus
Descriptor: Cadherin-5, Partitioning defective 3 homolog
Authors:Volkman, B.F, Tyler, R.C, Peterson, F.C.
Deposit date:2009-09-22
Release date:2010-02-09
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Distal interactions within the par3-VE-cadherin complex.
Biochemistry, 49, 2010
2KQN
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BU of 2kqn by Molmil
Solution structure of the AL-09 H87Y immunoglobulin light chain variable domain
Descriptor: Ig kappa chain V-I region AU
Authors:Volkman, B.F, Peterson, F.C, Ramirez-Alvarado, M, Baden, E.M.
Deposit date:2009-11-11
Release date:2010-03-16
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:A single mutation promotes amyloidogenicity through a highly promiscuous dimer interface.
Structure, 18, 2010
2KOL
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BU of 2kol by Molmil
Solution structure of human SDF1-alpha H25R
Descriptor: Stromal cell-derived factor 1
Authors:Volkman, B.F, Ziarek, J.J, Peterson, F.C, Veldkamp, C.T.
Deposit date:2009-09-24
Release date:2010-10-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of human SDF1-alpha H25R
To be Published
6CWS
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BU of 6cws by Molmil
The NMR solution structure of CCL28
Descriptor: C-C motif chemokine 28
Authors:Thomas, M.A, Peterson, F.C, Volkman, B.F.
Deposit date:2018-03-30
Release date:2018-07-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Solution Structure of CCL28 Reveals Structural Lability that Does Not Constrain Antifungal Activity.
J. Mol. Biol., 430, 2018
2QL0
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BU of 2ql0 by Molmil
Zinc-substituted Rubredoxin from Desulfovibrio Vulgaris
Descriptor: Rubredoxin, ZINC ION
Authors:Goodfellow, B.J, Nunes, S.G, Volkman, B.F, Moura, J.G, Macedo, A.L, Duarte, I.C, Markley, J.L, Moura, I.
Deposit date:2007-07-12
Release date:2008-07-08
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:
To be published
4F4J
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BU of 4f4j by Molmil
Conversion of the enzyme guanylate kinase into a mitotic spindle orienting protein by a single mutation that inhibits gmp- induced closing
Descriptor: Guanylate kinase, SULFATE ION
Authors:Johnston, C.A, Whitney, D, Volkman, B.F, Prehoda, K.E.
Deposit date:2012-05-10
Release date:2012-06-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Conversion of the enzyme guanylate kinase into a mitotic-spindle orienting protein by a single mutation that inhibits GMP-induced closing.
Proc.Natl.Acad.Sci.USA, 108, 2011
5KTF
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BU of 5ktf by Molmil
Structure of the C-terminal transmembrane domain of scavenger receptor BI (SR-BI)
Descriptor: Scavenger receptor class B member 1
Authors:Chadwick, A.C, Peterson, F.C, Volkman, B.F, Sahoo, D.
Deposit date:2016-07-11
Release date:2017-03-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR Structure of the C-Terminal Transmembrane Domain of the HDL Receptor, SR-BI, and a Functionally Relevant Leucine Zipper Motif.
Structure, 25, 2017
7LP4
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BU of 7lp4 by Molmil
Structure of Nedd4L WW3 domain
Descriptor: E3 ubiquitin-protein ligase NEDD4-like
Authors:Alam, S.L, Alian, A, Thompson, T, Rheinemann, L, Volkman, B.F, Peterson, F.C, Sundquist, W.I.
Deposit date:2021-02-11
Release date:2021-07-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release.
J.Biol.Chem., 297, 2021
4WVO
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BU of 4wvo by Molmil
An engineered PYR1 mandipropamid receptor in complex with mandipropamid and HAB1
Descriptor: (2S)-2-(4-chlorophenyl)-N-{2-[3-methoxy-4-(prop-2-yn-1-yloxy)phenyl]ethyl}-2-(prop-2-yn-1-yloxy)ethanamide, Abscisic acid receptor PYR1, MAGNESIUM ION, ...
Authors:Peterson, F.C, Volkman, B.F, Cutler, S.R.
Deposit date:2014-11-06
Release date:2015-02-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Agrochemical control of plant water use using engineered abscisic acid receptors.
Nature, 520, 2015
4A1M
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BU of 4a1m by Molmil
NMR Structure of protoporphyrin-IX bound murine p22HBP
Descriptor: HEME-BINDING PROTEIN 1
Authors:Goodfellow, B.J, Dias, J.S, Macedo, A.L, Ferreira, G.C, Peterson, F.C, Volkman, B.F, Duarte, I.C.N.
Deposit date:2011-09-15
Release date:2011-10-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The NMR Structure of Protoporphyrin-Ix Bound Murine P22Hbp
To be Published
5I7Z
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BU of 5i7z by Molmil
Crystal structure of a Par-6 PDZ-Crumbs 3 C-terminal peptide complex
Descriptor: Crb-3, DI(HYDROXYETHYL)ETHER, LD29223p
Authors:Whitney, D.S, Peterson, F.C, Prehoda, K.E, Volkman, B.F.
Deposit date:2016-02-18
Release date:2016-03-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Binding of Crumbs to the Par-6 CRIB-PDZ Module Is Regulated by Cdc42.
Biochemistry, 55, 2016
7MLC
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BU of 7mlc by Molmil
PYL10 bound to the ABA pan-antagonist 4a
Descriptor: 1-{2-[3,5-dicyclopropyl-4-(4-{[(quinoxaline-2-carbonyl)amino]methyl}-1H-1,2,3-triazol-1-yl)phenyl]acetamido}cyclohexane-1-carboxylic acid, Abscisic acid receptor PYL10, GLYCEROL
Authors:Peterson, F.C, Vaidya, A.S, Volkman, B.F, Cutler, S.R.
Deposit date:2021-04-28
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Click-to-lead design of a picomolar ABA receptor antagonist with potent activity in vivo.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MLD
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BU of 7mld by Molmil
PYL10 bound to the ABA pan-antagonist antabactin
Descriptor: Abscisic acid receptor PYL10, CITRIC ACID, antabactin
Authors:Peterson, F.C, Vaidya, A.S, Volkman, B.F, Cutler, S.R.
Deposit date:2021-04-28
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Click-to-lead design of a picomolar ABA receptor antagonist with potent activity in vivo.
Proc.Natl.Acad.Sci.USA, 118, 2021
6NWB
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BU of 6nwb by Molmil
PYL10 bound to the selective agonist hexabactin
Descriptor: Abscisic acid receptor PYL10, N-{[(4-cyanophenyl)methyl]sulfonyl}-1-(thiophen-3-yl)cyclohexane-1-carboxamide
Authors:Peterson, F.C, Vaidya, A, Jensen, D.R, Volkman, B.F, Cutler, S.R.
Deposit date:2019-02-06
Release date:2020-02-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:PYL10 bound to the selective agonist hexabactin
To Be Published
6NWC
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BU of 6nwc by Molmil
PYL10 bound to the ABA pan-agonist 3CB
Descriptor: 1-{[(4-cyano-3-cyclopropylphenyl)acetyl]amino}cyclohexane-1-carboxylic acid, Abscisic acid receptor PYL10
Authors:Peterson, F.C, Vaidya, A, Jensen, D.R, Volkman, B.F, Cutler, S.R.
Deposit date:2019-02-06
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Dynamic control of plant water use using designed ABA receptor agonists.
Science, 366, 2019

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PDB entries from 2024-05-01

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