Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2A1I
DownloadVisualize
BU of 2a1i by Molmil
Crystal Structure of the Central Domain of Human ERCC1
Descriptor: DNA excision repair protein ERCC-1, MERCURY (II) ION
Authors:Tsodikov, O.V, Enzlin, J.H, Scharer, O.D, Ellenberger, T.
Deposit date:2005-06-20
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure and DNA binding functions of ERCC1, a subunit of the DNA structure-specific endonuclease XPF-ERCC1.
Proc.Natl.Acad.Sci.Usa, 102, 2005
2A1J
DownloadVisualize
BU of 2a1j by Molmil
Crystal Structure of the Complex between the C-Terminal Domains of Human XPF and ERCC1
Descriptor: DNA excision repair protein ERCC-1, DNA repair endonuclease XPF, MERCURY (II) ION
Authors:Tsodikov, O.V, Enzlin, J.H, Scharer, O.D, Ellenberger, T.
Deposit date:2005-06-20
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure and DNA binding functions of ERCC1, a subunit of the DNA structure-specific endonuclease XPF-ERCC1.
Proc.Natl.Acad.Sci.Usa, 102, 2005
3PVP
DownloadVisualize
BU of 3pvp by Molmil
Structure of Mycobacterium tuberculosis DnaA-DBD in complex with box2 DNA
Descriptor: Chromosomal replication initiator protein dnaA, DNA (5'-D(*CP*GP*TP*TP*AP*TP*CP*CP*AP*CP*AP*AP*C)-3'), DNA (5'-D(*GP*TP*TP*GP*TP*GP*GP*AP*TP*AP*AP*CP*G)-3')
Authors:Tsodikov, O.V, Biswas, T.
Deposit date:2010-12-07
Release date:2011-05-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Thermodynamic Signatures of DNA Recognition by Mycobacterium tuberculosis DnaA.
J.Mol.Biol., 410, 2011
3PVV
DownloadVisualize
BU of 3pvv by Molmil
Structure of Mycobacterium tuberculosis DnaA-DBD in complex with box1 DNA
Descriptor: Chromosomal replication initiator protein dnaA, DNA (5'-D(*CP*GP*TP*TP*GP*TP*CP*CP*AP*CP*AP*AP*C)-3'), DNA (5'-D(*GP*TP*TP*GP*TP*GP*GP*AP*CP*AP*AP*CP*G)-3')
Authors:Tsodikov, O.V, Biswas, T.
Deposit date:2010-12-07
Release date:2011-05-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Thermodynamic Signatures of DNA Recognition by Mycobacterium tuberculosis DnaA.
J.Mol.Biol., 410, 2011
2JNW
DownloadVisualize
BU of 2jnw by Molmil
Solution structure of a ERCC1-XPA heterodimer
Descriptor: DNA excision repair protein ERCC-1, DNA-repair protein complementing XP-A cells
Authors:Tsodikov, O.V, Ivanov, D, Orelli, B, Staresincic, L, Scharer, O.D, Wagner, G.
Deposit date:2007-02-07
Release date:2007-10-30
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Structural basis for the recruitment of ERCC1-XPF to nucleotide excision repair complexes by XPA
Embo J., 26, 2007
3HYC
DownloadVisualize
BU of 3hyc by Molmil
Crystal structure of E. coli phosphatase YrbI, with Mg, tetragonal form
Descriptor: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, CHLORIDE ION, MAGNESIUM ION
Authors:Tsodikov, O.V, Biswas, T.
Deposit date:2009-06-22
Release date:2009-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE.
J.Biol.Chem., 284, 2009
4Z2Y
DownloadVisualize
BU of 4z2y by Molmil
Crystal structure of methyltransferase CalO6
Descriptor: CalO6, MERCURY (II) ION
Authors:Hou, C, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2015-03-30
Release date:2015-07-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of O-methyltransferase CalO6 from the calicheamicin biosynthetic pathway: a case of challenging structure determination at low resolution.
Bmc Struct.Biol., 15, 2015
2R8Z
DownloadVisualize
BU of 2r8z by Molmil
Crystal structure of YrbI phosphatase from Escherichia coli in complex with a phosphate and a calcium ion
Descriptor: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, CALCIUM ION, PHOSPHATE ION
Authors:Tsodikov, O.V, Aggarwal, P, Rubin, J.R, Stuckey, J.A, Woodard, R.W, Biswas, T.
Deposit date:2007-09-11
Release date:2008-09-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE.
J.Biol.Chem., 284, 2009
2R8X
DownloadVisualize
BU of 2r8x by Molmil
Crystal structure of YrbI phosphatase from Escherichia coli
Descriptor: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, CHLORIDE ION
Authors:Tsodikov, O.V, Aggarwal, P, Rubin, J.R, Stuckey, J.A, Woodard, R.W, Biswas, T.
Deposit date:2007-09-11
Release date:2008-09-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE.
J.Biol.Chem., 284, 2009
2R8Y
DownloadVisualize
BU of 2r8y by Molmil
Crystal structure of YrbI phosphatase from Escherichia coli in a complex with Ca
Descriptor: CALCIUM ION, CHLORIDE ION, YrbI from Escherichia coli
Authors:Tsodikov, O.V, Aggarwal, P, Rubin, J.R, Stuckey, J.A, Woodard, R.W, Biswas, T.
Deposit date:2007-09-11
Release date:2008-09-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE.
J.Biol.Chem., 284, 2009
2R8E
DownloadVisualize
BU of 2r8e by Molmil
Crystal structure of YrbI from Escherichia coli in complex with Mg
Descriptor: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, CHLORIDE ION, MAGNESIUM ION
Authors:Tsodikov, O.V, Aggarwal, P, Rubin, J.R, Stuckey, J.A, Woodard, R, Biswas, T.
Deposit date:2007-09-10
Release date:2008-09-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE.
J.Biol.Chem., 284, 2009
4RVH
DownloadVisualize
BU of 4rvh by Molmil
Crystal structure of MtmC in complex with SAH and TDP-4-keto-D-olivose
Descriptor: D-mycarose 3-C-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION, ...
Authors:Tsodikov, O.V, Hou, C, Chen, J.-M, Rohr, J.
Deposit date:2014-11-26
Release date:2015-01-28
Last modified:2015-05-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Insight into MtmC, a Bifunctional Ketoreductase-Methyltransferase Involved in the Assembly of the Mithramycin Trisaccharide Chain.
Biochemistry, 54, 2015
4RVG
DownloadVisualize
BU of 4rvg by Molmil
Crystal structure of MtmC in complex with SAM and TDP
Descriptor: ACETATE ION, D-mycarose 3-C-methyltransferase, S-ADENOSYLMETHIONINE, ...
Authors:Tsodikov, O.V, Hou, C, Chen, J.-M, Rohr, J.
Deposit date:2014-11-26
Release date:2015-01-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insight into MtmC, a Bifunctional Ketoreductase-Methyltransferase Involved in the Assembly of the Mithramycin Trisaccharide Chain.
Biochemistry, 54, 2015
4RVD
DownloadVisualize
BU of 4rvd by Molmil
Crystal structure of MtmC in complex with SAM
Descriptor: ACETATE ION, D-mycarose 3-C-methyltransferase, S-ADENOSYLMETHIONINE, ...
Authors:Tsodikov, O.V, Hou, C, Chen, J.-M, Rohr, J.
Deposit date:2014-11-26
Release date:2015-01-28
Last modified:2015-05-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insight into MtmC, a Bifunctional Ketoreductase-Methyltransferase Involved in the Assembly of the Mithramycin Trisaccharide Chain.
Biochemistry, 54, 2015
4RVF
DownloadVisualize
BU of 4rvf by Molmil
Crystal structure of MtmC in complex with TDP
Descriptor: D-mycarose 3-C-methyltransferase, THYMIDINE-5'-DIPHOSPHATE, ZINC ION
Authors:Tsodikov, O.V, Hou, C, Chen, J.-M, Rohr, J.
Deposit date:2014-11-26
Release date:2015-01-28
Last modified:2015-05-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Insight into MtmC, a Bifunctional Ketoreductase-Methyltransferase Involved in the Assembly of the Mithramycin Trisaccharide Chain.
Biochemistry, 54, 2015
5DBJ
DownloadVisualize
BU of 5dbj by Molmil
Crystal structure of halogenase PltA
Descriptor: CHLORIDE ION, FADH2-dependent halogenase PltA, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Pang, A.H, Tsodikov, O.V.
Deposit date:2015-08-21
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of halogenase PltA from the pyoluteorin biosynthetic pathway.
J.Struct.Biol., 192, 2015
5TVJ
DownloadVisualize
BU of 5tvj by Molmil
Crystal structure of acetyltransferase Eis from Mycobacterium tuberculosis in complex with CoA and inhibitor 2k*: 1-(4-fluorophenyl)-2-[2-(4-methylphenyl)-2-oxoethyl]pyrrolo[1,2-a]pyrazin-2-ium
Descriptor: 1-(4-fluorophenyl)-2-[2-(4-methylphenyl)-2-oxoethyl]pyrrolo[1,2-a]pyrazin-2-ium, CHLORIDE ION, COENZYME A, ...
Authors:Gajadeera, C.S, Garzan, A, Hou, C, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2016-11-09
Release date:2017-03-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Combating Enhanced Intracellular Survival (Eis)-Mediated Kanamycin Resistance of Mycobacterium tuberculosis by Novel Pyrrolo[1,5-a]pyrazine-Based Eis Inhibitors.
ACS Infect Dis, 3, 2017
5W34
DownloadVisualize
BU of 5w34 by Molmil
Crystal structure of the RNA polymerase domain (RPD) of Mycobacterium tuberculosis primase DnaG in complex with double-stranded DNA GACCGGAAGTGG
Descriptor: DNA oligomer 5'-CCACTTCCGGTC, DNA oligomer 5'-GACCGGAAGTGG, DNA primase
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2017-06-07
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structures of the Catalytic Domain of Bacterial Primase DnaG in Complexes with DNA Provide Insight into Key Priming Events.
Biochemistry, 57, 2018
4JD6
DownloadVisualize
BU of 4jd6 by Molmil
Crystal structure of Mycobacterium tuberculosis Eis in complex with coenzyme A and tobramycin
Descriptor: COENZYME A, Enhanced intracellular survival protein, TOBRAMYCIN
Authors:Biswas, T, Chen, W, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2013-02-23
Release date:2013-10-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Chemical and structural insights into the regioversatility of the aminoglycoside acetyltransferase eis.
Chembiochem, 14, 2013
5KDE
DownloadVisualize
BU of 5kde by Molmil
Inorganic pyrophosphatase from Mycobacterium tuberculosis in complex with inhibitor 1 and inorganic pyrophosphate
Descriptor: 2,4-bis(aziridin-1-yl)-6-(1-phenylpyrrol-2-yl)-1,3,5-triazine, Inorganic pyrophosphatase, PYROPHOSPHATE 2-
Authors:Pang, A.H, Garzan, A, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2016-06-08
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Discovery of Allosteric and Selective Inhibitors of Inorganic Pyrophosphatase from Mycobacterium tuberculosis.
ACS Chem. Biol., 11, 2016
5KDF
DownloadVisualize
BU of 5kdf by Molmil
Inorganic pyrophosphatase from Mycobacterium tuberculosis in complex with inhibitor 6 and inorganic pyrophosphate
Descriptor: CALCIUM ION, Inorganic pyrophosphatase, PYROPHOSPHATE 2-, ...
Authors:Pang, A.H, Garzan, A, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2016-06-08
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Discovery of Allosteric and Selective Inhibitors of Inorganic Pyrophosphatase from Mycobacterium tuberculosis.
ACS Chem. Biol., 11, 2016
3U9F
DownloadVisualize
BU of 3u9f by Molmil
Structure of CATI in complex with chloramphenicol
Descriptor: CHLORAMPHENICOL, Chloramphenicol acetyltransferase
Authors:Biswas, T, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2011-10-18
Release date:2012-02-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structural basis for substrate versatility of chloramphenicol acetyltransferase CAT(I).
Protein Sci., 21, 2012
3U9B
DownloadVisualize
BU of 3u9b by Molmil
Structure of apo-CATI
Descriptor: Chloramphenicol acetyltransferase
Authors:Biswas, T, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2011-10-18
Release date:2012-02-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The structural basis for substrate versatility of chloramphenicol acetyltransferase CAT(I).
Protein Sci., 21, 2012
4RV9
DownloadVisualize
BU of 4rv9 by Molmil
Crystal structure of MtmC in complex with SAH
Descriptor: ACETATE ION, CHLORIDE ION, D-mycarose 3-C-methyltransferase, ...
Authors:Hou, C, Chen, J.-M, Rohr, J, Tsodikov, O.V.
Deposit date:2014-11-25
Release date:2015-02-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insight into MtmC, a Bifunctional Ketoreductase-Methyltransferase Involved in the Assembly of the Mithramycin Trisaccharide Chain.
Biochemistry, 54, 2015
5IV0
DownloadVisualize
BU of 5iv0 by Molmil
Crystal structure of Eis from Mycobacterium tuberculosis in complex with sulfonamide inhibitor 39 and coenzyme A
Descriptor: CHLORIDE ION, COENZYME A, Enhanced intracellular survival protein, ...
Authors:Gajadeera, C.S, Hou, C, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2016-03-18
Release date:2017-01-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Sulfonamide-Based Inhibitors of Aminoglycoside Acetyltransferase Eis Abolish Resistance to Kanamycin in Mycobacterium tuberculosis.
J. Med. Chem., 59, 2016

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon