Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6DEU
DownloadVisualize
BU of 6deu by Molmil
Human caspase-6 A109T
Descriptor: Caspase-6
Authors:Tubeleviciute-Aydin, A, Beautrait, A, Lynham, J, Sharma, G, Gorelik, A, Deny, L.J, Soya, N, Lukacs, G.L, Nagar, B, Marinier, A, LeBlanc, A.C.
Deposit date:2018-05-13
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.796 Å)
Cite:Identification of Allosteric Inhibitors against Active Caspase-6.
Sci Rep, 9, 2019
6DEV
DownloadVisualize
BU of 6dev by Molmil
Human caspase-6 E35K
Descriptor: Caspase-6
Authors:Tubeleviciute-Aydin, A, Beautrait, A, Lynham, J, Sharma, G, Gorelik, A, Deny, L.J, Soya, N, Lukacs, G.L, Nagar, B, Marinier, A, LeBlanc, A.C.
Deposit date:2018-05-13
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.348 Å)
Cite:Identification of Allosteric Inhibitors against Active Caspase-6.
Sci Rep, 9, 2019
6DJX
DownloadVisualize
BU of 6djx by Molmil
Crystal Structure of pParkin-pUb-UbcH7 complex
Descriptor: RBR-type E3 ubiquitin transferase,RBR-type E3 ubiquitin transferase, Ubiquitin, Ubiquitin-conjugating enzyme E2 L3, ...
Authors:Sauve, V, Sung, G, Trempe, J.F, Gehring, K.
Deposit date:2018-05-27
Release date:2018-07-04
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (4.801 Å)
Cite:Mechanism of parkin activation by phosphorylation.
Nat. Struct. Mol. Biol., 25, 2018
6DJW
DownloadVisualize
BU of 6djw by Molmil
Crystal Structure of pParkin (REP and RING2 deleted)-pUb-UbcH7 complex
Descriptor: RBR-type E3 ubiquitin transferase,RBR-type E3 ubiquitin transferase, Ubiquitin, Ubiquitin-conjugating enzyme E2 L3, ...
Authors:Sauve, V, Sung, G, Trempe, J.F, Gehring, K.
Deposit date:2018-05-26
Release date:2018-07-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.801 Å)
Cite:Mechanism of parkin activation by phosphorylation.
Nat. Struct. Mol. Biol., 25, 2018
7MP8
DownloadVisualize
BU of 7mp8 by Molmil
Crystal structure of the cytosolic domain of Tribolium castaneum PINK1 in the non-phosphorylated state
Descriptor: SULFATE ION, Serine/threonine-protein kinase PINK1, mitochondrial-like Protein
Authors:Rasool, S, Veyron, S, Trempe, J.F.
Deposit date:2021-05-04
Release date:2021-12-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Mechanism of PINK1 activation by autophosphorylation and insights into assembly on the TOM complex.
Mol.Cell, 82, 2022
7MP9
DownloadVisualize
BU of 7mp9 by Molmil
Crystal structure of the cytosolic domain of Tribolium castaneum PINK1 phosphorylated at Ser205 in complex with ADP analog
Descriptor: AMP PHOSPHORAMIDATE, MAGNESIUM ION, SULFATE ION, ...
Authors:Rasool, S, Veyron, S, Trempe, J.F.
Deposit date:2021-05-04
Release date:2021-12-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanism of PINK1 activation by autophosphorylation and insights into assembly on the TOM complex.
Mol.Cell, 82, 2022
8XUJ
DownloadVisualize
BU of 8xuj by Molmil
Structure of beta-1,2-glucanase from Endozoicomonas elysicola (EeSGL1, ligand-free)
Descriptor: Membrane protein
Authors:Nakajima, M, Motouchi, S, Nakai, H.
Deposit date:2024-01-13
Release date:2025-01-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of beta-1,2-glucanase from Endozoicomonas elysicola (EeSGL1, ligand-free)
To Be Published
8XUL
DownloadVisualize
BU of 8xul by Molmil
Structure of beta-1,2-glucanase from Xanthomonas campestris pv. campestris (beta-1,2-glucoheptasaccharide complex)-E239Q mutant
Descriptor: XCC2207, beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose
Authors:Nakajima, M, Motouchi, S, Nakai, H.
Deposit date:2024-01-13
Release date:2025-01-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:beta-1,2-Glucanase superfamily identified by sequential, functional and structural analyses
To Be Published
8XUK
DownloadVisualize
BU of 8xuk by Molmil
Structure of beta-1,2-glucanase from Photobacterium gaetbulicola (PgSGL3, ligand-free)
Descriptor: CHLORIDE ION, H744_1c0222
Authors:Nakajima, M, Motouchi, S, Nakai, H.
Deposit date:2024-01-13
Release date:2025-01-22
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:beta-1,2-Glucanase superfamily identified by sequential, functional and structural analyses
To Be Published
8JNE
DownloadVisualize
BU of 8jne by Molmil
The cryo-EM structure of the decameric RAD51 ring bound to the nucleosome without the linker DNA binding
Descriptor: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
Authors:Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
Deposit date:2023-06-06
Release date:2024-03-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.68 Å)
Cite:Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8JNF
DownloadVisualize
BU of 8jnf by Molmil
The cryo-EM structure of the RAD51 filament bound to the nucleosome
Descriptor: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
Authors:Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
Deposit date:2023-06-06
Release date:2024-03-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6.91 Å)
Cite:Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8JND
DownloadVisualize
BU of 8jnd by Molmil
The cryo-EM structure of the nonameric RAD51 ring bound to the nucleosome with the linker DNA binding
Descriptor: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
Authors:Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
Deposit date:2023-06-06
Release date:2024-03-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8XBU
DownloadVisualize
BU of 8xbu by Molmil
The cryo-EM structure of the decameric RAD51 ring bound to the nucleosome with the linker DNA binding
Descriptor: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
Authors:Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
Deposit date:2023-12-07
Release date:2024-03-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.24 Å)
Cite:Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8XBY
DownloadVisualize
BU of 8xby by Molmil
The cryo-EM structure of the RAD51 L1 and L2 loops bound to the linker DNA with the blunt end of the nucleosome
Descriptor: DNA (5'-D(P*AP*AP*CP*GP*AP*AP*AP*AP*CP*GP*GP*CP*CP*AP*CP*CP*AP*CP*G)-3'), DNA (5'-D(P*CP*GP*TP*GP*GP*TP*GP*GP*CP*CP*GP*TP*TP*TP*TP*CP*GP*TP*T)-3'), DNA repair protein RAD51 homolog 1
Authors:Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
Deposit date:2023-12-07
Release date:2024-03-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8XBW
DownloadVisualize
BU of 8xbw by Molmil
The cryo-EM structure of the RAD51 N-terminal lobe domain bound to the histone H4 tail of the nucleosome
Descriptor: DNA (5'-D(P*AP*CP*CP*GP*CP*TP*TP*AP*AP*AP*CP*GP*CP*AP*CP*GP*TP*A)-3'), DNA (5'-D(P*TP*AP*CP*GP*TP*GP*CP*GP*TP*TP*TP*AP*AP*GP*CP*GP*GP*T)-3'), DNA repair protein RAD51 homolog 1, ...
Authors:Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
Deposit date:2023-12-07
Release date:2024-03-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8XBX
DownloadVisualize
BU of 8xbx by Molmil
The cryo-EM structure of the RAD51 L2 loop bound to the linker DNA with the blunt end of the nucleosome
Descriptor: DNA (5'-D(P*AP*AP*CP*GP*AP*AP*AP*AP*CP*GP*GP*CP*CP*AP*CP*CP*AP*CP*G)-3'), DNA (5'-D(P*CP*GP*TP*GP*GP*TP*GP*GP*CP*CP*GP*TP*TP*TP*TP*CP*GP*TP*T)-3'), DNA repair protein RAD51 homolog 1
Authors:Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
Deposit date:2023-12-07
Release date:2024-03-27
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (4.36 Å)
Cite:Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8XBV
DownloadVisualize
BU of 8xbv by Molmil
The cryo-EM structure of the RAD51 L1 and L2 loops bound to the linker DNA with the sticky end of the nucleosome
Descriptor: DNA (5'-D(P*CP*GP*AP*AP*AP*AP*CP*GP*GP*CP*CP*AP*CP*CP*A)-3'), DNA (5'-D(P*TP*GP*GP*CP*CP*GP*TP*TP*TP*TP*CP*G)-3'), DNA repair protein RAD51 homolog 1
Authors:Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
Deposit date:2023-12-07
Release date:2024-03-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.61 Å)
Cite:Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8XBT
DownloadVisualize
BU of 8xbt by Molmil
The cryo-EM structure of the octameric RAD51 ring bound to the nucleosome with the linker DNA binding
Descriptor: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
Authors:Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
Deposit date:2023-12-07
Release date:2024-03-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon