Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6KE9
DownloadVisualize
BU of 6ke9 by Molmil
The Human Telomeric Nucleosome Displays Distinct Structural and Dynamic Properties
Descriptor: Histone H2A type 1-B/E, Histone H2B type 1-K, Histone H3.1, ...
Authors:Soman, A, Liew, C.W, Teo, H.L, Berezhnoy, N, Korolev, N, Rhodes, D, Nordenskiold, L.
Deposit date:2019-07-04
Release date:2020-04-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:The human telomeric nucleosome displays distinct structural and dynamic properties.
Nucleic Acids Res., 48, 2020
6LE9
DownloadVisualize
BU of 6le9 by Molmil
The Human Telomeric Nucleosome Displays Distinct Structural and Dynamic Properties
Descriptor: Histone H2A type 1-B/E, Histone H2B type 1-K, Histone H3.1, ...
Authors:Soman, A, Liew, C.W, Teo, H.L, Berezhnoy, N, Korolev, N, Rhodes, D, Nordenskiold, L.
Deposit date:2019-11-24
Release date:2020-04-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The human telomeric nucleosome displays distinct structural and dynamic properties.
Nucleic Acids Res., 48, 2020
6L9H
DownloadVisualize
BU of 6l9h by Molmil
The Human Telomeric Nucleosome Displays Distinct Structural and Dynamic Properties
Descriptor: Histone H2A type 1-B/E, Histone H2B type 1-K, Histone H3.1, ...
Authors:Soman, A, Liew, C.W, Teo, H.L, Berezhnoy, N, Korolev, N, Rhodes, D, Nordenskiold, L.
Deposit date:2019-11-10
Release date:2020-04-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The human telomeric nucleosome displays distinct structural and dynamic properties.
Nucleic Acids Res., 48, 2020
7V96
DownloadVisualize
BU of 7v96 by Molmil
Telomeric Dinucleosome
Descriptor: DNA (275-mer), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Soman, A.
Deposit date:2021-08-24
Release date:2022-07-27
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.92 Å)
Cite:Columnar structure of human telomeric chromatin.
Nature, 609, 2022
7V90
DownloadVisualize
BU of 7v90 by Molmil
Telomeric mononucleosome
Descriptor: DNA (145-mer), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Soman, A.
Deposit date:2021-08-24
Release date:2022-07-27
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Columnar structure of human telomeric chromatin.
Nature, 609, 2022
7VA4
DownloadVisualize
BU of 7va4 by Molmil
Telomeric tetranucleosome in open state
Descriptor: DNA (539-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Soman, A.
Deposit date:2021-08-27
Release date:2022-07-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (14 Å)
Cite:Columnar structure of human telomeric chromatin.
Nature, 609, 2022
7V9J
DownloadVisualize
BU of 7v9j by Molmil
Telomeric trinucleosome
Descriptor: DNA (408-mer), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Soman, A.
Deposit date:2021-08-25
Release date:2022-07-27
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Columnar structure of human telomeric chromatin.
Nature, 609, 2022
7V9S
DownloadVisualize
BU of 7v9s by Molmil
Telomeric trinucleosome in open state
Descriptor: DNA (408-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Soman, A.
Deposit date:2021-08-26
Release date:2022-07-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Columnar structure of human telomeric chromatin.
Nature, 609, 2022
7V9C
DownloadVisualize
BU of 7v9c by Molmil
Telomeric Dinucleosome in open state
Descriptor: DNA (275-mer), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Soman, A.
Deposit date:2021-08-24
Release date:2022-07-27
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Columnar structure of human telomeric chromatin.
Nature, 609, 2022
7V9K
DownloadVisualize
BU of 7v9k by Molmil
Telomeric tetranucleosome
Descriptor: DNA (539-mer), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Soman, A.
Deposit date:2021-08-25
Release date:2022-07-27
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (8.1 Å)
Cite:Columnar structure of human telomeric chromatin.
Nature, 609, 2022
1WY5
DownloadVisualize
BU of 1wy5 by Molmil
Crystal structure of isoluecyl-tRNA lysidine synthetase
Descriptor: Hypothetical UPF0072 protein AQ_1887
Authors:Nakanishi, K, Fukai, S, Ikeuchi, Y, Soma, A, Sekine, Y, Suzuki, T, Nureki, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-02-06
Release date:2005-05-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structural basis for lysidine formation by ATP pyrophosphatase accompanied by a lysine-specific loop and a tRNA-recognition domain.
Proc.Natl.Acad.Sci.Usa, 102, 2005
2ASK
DownloadVisualize
BU of 2ask by Molmil
Structure of human Artemin
Descriptor: SULFATE ION, artemin
Authors:Silvian, L, Jin, P, Carmillo, P, Boriack-Sjodin, P.A, Pelletier, C, Rushe, M, Gong, B.J, Sah, D, Pepinsky, B, Rossomando, A.
Deposit date:2005-08-23
Release date:2006-06-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Artemin crystal structure reveals insights into heparan sulfate binding.
Biochemistry, 45, 2006
7DBP
DownloadVisualize
BU of 7dbp by Molmil
Linker histone defines structure and self-association behaviour of the 177 bp human chromosome
Descriptor: DNA (175-MER), Histone H1.0, Histone H2A type 1-B/E, ...
Authors:Wang, S, Vogirala, K.V, Soman, A, Liu, Z.B.
Deposit date:2020-10-21
Release date:2020-12-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Linker histone defines structure and self-association behaviour of the 177 bp human chromatosome.
Sci Rep, 11, 2021
5Y0P
DownloadVisualize
BU of 5y0p by Molmil
Crystal structure of Bacillus subtilis TmcAL bound with alpha-thio ATP
Descriptor: ADENOSINE-5'-RP-ALPHA-THIO-TRIPHOSPHATE, UPF0348 protein B4417_3650
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0S
DownloadVisualize
BU of 5y0s by Molmil
Crystal structure of apo Thermotoga maritima TmcAL(Form II)
Descriptor: 1,2-ETHANEDIOL, Thermotoga maritima TmcAL
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0R
DownloadVisualize
BU of 5y0r by Molmil
Crystal structure of Thermotoga maritima TmcAL (apo, form I)
Descriptor: TmTmcAL(SeMet)
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2018-12-26
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0N
DownloadVisualize
BU of 5y0n by Molmil
Crystal structure of Bacillus subtilis TmcAL bound with ATP (SeMet derivative)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, UPF0348 protein B4417_3650
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2018-12-26
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0Q
DownloadVisualize
BU of 5y0q by Molmil
Crystal structure of BsTmcAL bound with AMPCPP
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, UPF0348 protein B4417_3650
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0O
DownloadVisualize
BU of 5y0o by Molmil
Crystal structure of apo BsTmcAL
Descriptor: UPF0348 protein B4417_3650
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0T
DownloadVisualize
BU of 5y0t by Molmil
Crystal structure of Thermotoga maritima TmcAL bound with alpha-thio ATP(Form II)
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-RP-ALPHA-THIO-TRIPHOSPHATE, PENTAETHYLENE GLYCOL, ...
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
3O7N
DownloadVisualize
BU of 3o7n by Molmil
The V59W mutation blocks the distal pocket of the hemoglobin - dehaloperoxidase from Amphitrite ornata
Descriptor: 4-BROMOPHENOL, Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:de Serrano, V.S, Davis, M.F, Franzen, S.
Deposit date:2010-07-30
Release date:2011-07-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The V59W mutation blocks the distal pocket of the hemoglobin - dehaloperoxidase from Amphitirite ornata
To be Published
3K3U
DownloadVisualize
BU of 3k3u by Molmil
The V59W mutation blocks the distal pocket of the hemoglobin dehaloperoxidase from Amphitrite ornata
Descriptor: Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:de Serrano, V, Davis, M.F, Franzen, S.
Deposit date:2009-10-05
Release date:2010-11-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:The V59W mutation blocks the distal pocket of the hemoglobin dehaloperoxidase from Amphitrite ornata
To be Published

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon