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4C5M
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BU of 4c5m by Molmil
Structure of the pyridoxal kinase from Staphylococcus aureus in complex with AMP-PCP
Descriptor: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, PHOSPHOMETHYLPYRIMIDINE KINASE, SULFATE ION
Authors:Nodwell, M, Alte, F, Sieber, S.A, Schneider, S.
Deposit date:2013-09-12
Release date:2014-03-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Subfamily of Bacterial Ribokinases Utilizes a Hemithioacetal for Pyridoxal Phosphate Salvage.
J.Am.Chem.Soc., 136, 2014
4C5K
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BU of 4c5k by Molmil
Structure of the pyridoxal kinase from Staphylococcus aureus in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, PHOSPHOMETHYLPYRIMIDINE KINASE, SULFATE ION
Authors:Nodwell, M, Alte, F, Sieber, S.A, Schneider, S.
Deposit date:2013-09-12
Release date:2014-03-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A Subfamily of Bacterial Ribokinases Utilizes a Hemithioacetal for Pyridoxal Phosphate Salvage.
J.Am.Chem.Soc., 136, 2014
6G56
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BU of 6g56 by Molmil
Apo-structure of the alanine racemase from Staphylococcus aureus
Descriptor: Alanine racemase 1, GLYCEROL, SULFATE ION
Authors:Hoegl, A, Sieber, S.A, Schneider, S.
Deposit date:2018-03-29
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Mining the cellular inventory of pyridoxal phosphate-dependent enzymes with functionalized cofactor mimics.
Nat Chem, 10, 2018
6G59
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BU of 6g59 by Molmil
Structure of the alanine racemase from Staphylococcus aureus in complex with an pyridoxal-6- phosphate derivative
Descriptor: (6-ethynyl-4-methanoyl-5-oxidanyl-pyridin-3-yl)methyl dihydrogen phosphate, Alanine racemase 1, CHLORIDE ION, ...
Authors:Hoegl, A, Sieber, S.A, Schneider, S.
Deposit date:2018-03-29
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Mining the cellular inventory of pyridoxal phosphate-dependent enzymes with functionalized cofactor mimics.
Nat Chem, 10, 2018
6G58
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BU of 6g58 by Molmil
Structure of the alanine racemase from Staphylococcus aureus in complex with a pyridoxal 5' phosphate-derivative
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, (6-but-3-ynyl-4-methyl-5-oxidanyl-pyridin-3-yl)methyl dihydrogen phosphate, ...
Authors:Hoegl, A, Sieber, S.A, Schneider, S.
Deposit date:2018-03-29
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mining the cellular inventory of pyridoxal phosphate-dependent enzymes with functionalized cofactor mimics.
Nat Chem, 10, 2018
6H23
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BU of 6h23 by Molmil
Crystal structure of the hClpP Y118A mutant with an activating small molecule
Descriptor: 1,2-ETHANEDIOL, ATP-dependent Clp protease proteolytic subunit, mitochondrial, ...
Authors:Kick, L.M, Sieber, S.A, Schneider, S.
Deposit date:2018-07-13
Release date:2018-08-29
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (3.089 Å)
Cite:Selective Activation of Human Caseinolytic Protease P (ClpP).
Angew. Chem. Int. Ed. Engl., 57, 2018
5LIR
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BU of 5lir by Molmil
Structure of the SALTY Sigma cross-reacting protein 27A (SCRP-27A) from Salmonella typhimurium
Descriptor: DI(HYDROXYETHYL)ETHER, Sigma cross-reacting protein 27A (SCRP-27A)
Authors:Schneider, S, Mandel, M, Sieber, S.A.
Deposit date:2016-07-15
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Natural-Product-Inspired Aminoepoxybenzoquinones Kill Members of the Gram-Negative Pathogen Salmonella by Attenuating Cellular Stress Response.
Angew.Chem.Int.Ed.Engl., 55, 2016
3V5E
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BU of 3v5e by Molmil
Crystal structure of ClpP from Staphylococcus aureus in the active, extended conformation
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Gersch, M, List, A, Groll, M, Sieber, S.
Deposit date:2011-12-16
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Insights into structural network responsible for oligomerization and activity of bacterial virulence regulator caseinolytic protease P (ClpP) protein.
J.Biol.Chem., 287, 2012
3V5I
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BU of 3v5i by Molmil
The crystal structure of the mutant ClpP S98A (Staphylococcus aureus)
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:List, A, Gersch, M, Groll, M, Sieber, S.
Deposit date:2011-12-16
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Insights into structural network responsible for oligomerization and activity of bacterial virulence regulator caseinolytic protease P (ClpP) protein.
J.Biol.Chem., 287, 2012
4JCR
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BU of 4jcr by Molmil
ClpP1 N165D mutant from Listeria monocytogenes
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Zeiler, E, List, A, Alte, F, Gersch, M, Wachtel, R, Groll, M, Sieber, S.
Deposit date:2013-02-22
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional insights into caseinolytic proteases reveal an unprecedented regulation principle of their catalytic triad.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JCQ
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BU of 4jcq by Molmil
ClpP1 from Listeria monocytogenes
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Zeiler, E, List, A, Alte, F, Gersch, M, Wachtel, R, Groll, M, Sieber, S.
Deposit date:2013-02-22
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional insights into caseinolytic proteases reveal an unprecedented regulation principle of their catalytic triad.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JCT
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BU of 4jct by Molmil
ClpP2 from Listeria monocytogenes
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Zeiler, E, List, A, Alte, F, Gersch, M, Wachtel, R, Groll, M, Sieber, S.
Deposit date:2013-02-22
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional insights into caseinolytic proteases reveal an unprecedented regulation principle of their catalytic triad.
Proc.Natl.Acad.Sci.USA, 110, 2013
8CIL
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BU of 8cil by Molmil
Crystal structure of Coxiella burnetii Fic protein 2
Descriptor: Fic family protein
Authors:Hoepfner, D, Itzen, A, Pogenberg, V.
Deposit date:2023-02-10
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:The DNA-binding induced (de)AMPylation activity of a Coxiella burnetii Fic enzyme targets Histone H3.
Commun Biol, 6, 2023
5DL1
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BU of 5dl1 by Molmil
ClpP from Staphylococcus aureus in complex with AV145
Descriptor: 1-(propan-2-yl)-N-{[2-(thiophen-2-yl)-1,3-oxazol-4-yl]methyl}-1H-pyrazolo[3,4-b]pyridine-5-carboxamide, ATP-dependent Clp protease proteolytic subunit
Authors:Vielberg, M.-T, Groll, M.
Deposit date:2015-09-04
Release date:2015-11-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Reversible Inhibitors Arrest ClpP in a Defined Conformational State that Can Be Revoked by ClpX Association.
Angew.Chem.Int.Ed.Engl., 54, 2015
6S8Z
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BU of 6s8z by Molmil
Elongation Factor P from Corynebacterium glutamicum
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Elongation factor P, ...
Authors:Schneider, S, Scheidler, C.M.
Deposit date:2019-07-11
Release date:2020-02-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Function of an Elongation Factor P Subfamily in Actinobacteria.
Cell Rep, 30, 2020
6SFW
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BU of 6sfw by Molmil
Cryo-EM Structure of the ClpX component of the ClpXP1/2 degradation machinery.
Descriptor: ATP-dependent Clp protease ATP-binding subunit ClpX
Authors:Gatsogiannis, C, Merino, F, Raunser, S.
Deposit date:2019-08-02
Release date:2019-10-16
Last modified:2020-01-22
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Cryo-EM structure of the ClpXP protein degradation machinery.
Nat.Struct.Mol.Biol., 26, 2019
6SFX
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BU of 6sfx by Molmil
Cryo-EM structure of ClpP1/2 in the LmClpXP1/2 complex
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Gatsogiannis, C, Merino, F, Raunser, S.
Deposit date:2019-08-02
Release date:2019-10-16
Last modified:2020-01-22
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structure of the ClpXP protein degradation machinery.
Nat.Struct.Mol.Biol., 26, 2019
5LP2
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BU of 5lp2 by Molmil
Adhesin domain of the type 1 HopQ of Helicobacter pylori strain G27
Descriptor: HopQ
Authors:Moonens, K, Kruse, T, Gerhard, M, Remaut, H.
Deposit date:2016-08-11
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Helicobacter pylori adhesin HopQ engages in a virulence-enhancing interaction with human CEACAMs.
Nat Microbiol, 2, 2016
5VZ2
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BU of 5vz2 by Molmil
Structure of ClpP from Staphylococcus aureus in complex with Acyldepsipeptide
Descriptor: ATP-dependent Clp protease proteolytic subunit, Acyldepsipeptide
Authors:Griffith, E.C, Lee, R.E.
Deposit date:2017-05-26
Release date:2017-06-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Ureadepsipeptides as ClpP Activators.
Acs Infect Dis., 2019
5W18
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BU of 5w18 by Molmil
Staphylococcus aureus ClpP in complex with (S)-N-((2R,6S,8aS,14aS,20S,23aS)-2,6-dimethyl-5,8,14,19,23-pentaoxooctadecahydro-1H,5H,14H,19H-pyrido[2,1-i]dipyrrolo[2,1-c:2',1'-l][1]oxa[4,7,10,13]tetraazacyclohexadecin-20-yl)-3-phenyl-2-(3-phenylureido)propanamide
Descriptor: 9V7-PHE-SER-PRO-YCP-ALA-MP8, ATP-dependent Clp protease proteolytic subunit
Authors:Lee, R.E, Griffith, E.C.
Deposit date:2017-06-02
Release date:2017-08-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Ureadepsipeptides as ClpP Activators.
Acs Infect Dis., 2019
6CFD
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BU of 6cfd by Molmil
ADEP4 bound to E. faecium ClpP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ATP-dependent Clp protease proteolytic subunit, N-[(6aS,12S,15aS,17R,21R,23aS)-17,21-dimethyl-6,11,15,20,23-pentaoxooctadecahydro-2H,6H,11H,15H-pyrido[2,1-i]dipyrrolo[2,1-c:2',1'-l][1,4,7,10,13]oxatetraazacyclohexadecin-12-yl]-3,5-difluoro-Nalpha-[(2E)-hept-2-enoyl]-L-phenylalaninamide
Authors:Lee, R.E, Griffith, E.C.
Deposit date:2018-02-14
Release date:2018-05-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:In VivoandIn VitroEffects of a ClpP-Activating Antibiotic against Vancomycin-Resistant Enterococci.
Antimicrob. Agents Chemother., 62, 2018
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