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301D
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BU of 301d by Molmil
CAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: RNA HAMMERHEAD RIBOZYME, MG(II)-SOAKED
分子名称: MAGNESIUM ION, RNA HAMMERHEAD RIBOZYME
著者Scott, W.G, Murray, J.B, Arnold, J.R.P, Stoddard, B.L, Klug, A.
登録日1996-12-14
公開日1997-01-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme.
Science, 274, 1996
300D
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BU of 300d by Molmil
CAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: RNA HAMMERHEAD RIBOZYME, MN(II)-SOAKED
分子名称: MANGANESE (II) ION, RNA HAMMERHEAD RIBOZYME
著者Scott, W.G, Murray, J.B, Arnold, J.R.P, Stoddard, B.L, Klug, A.
登録日1996-12-14
公開日1997-01-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme.
Science, 274, 1996
299D
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BU of 299d by Molmil
CAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: THE HAMMERHEAD RIBOZYME
分子名称: RNA HAMMERHEAD RIBOZYME
著者Scott, W.G, Murray, J.B, Arnold, J.R.P, Stoddard, B.L, Klug, A.
登録日1996-12-14
公開日1997-01-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme.
Science, 274, 1996
1MME
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BU of 1mme by Molmil
THE CRYSTAL STRUCTURE OF AN ALL-RNA HAMMERHEAD RIBOZYME: A PROPOSED MECHANISM FOR RNA CATALYTIC CLEAVAGE
分子名称: RNA HAMMERHEAD RIBOZYME
著者Scott, W.G, Finch, J.T, Klug, A.
登録日1995-12-09
公開日1996-02-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage.
Cell(Cambridge,Mass.), 81, 1995
3ZD4
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BU of 3zd4 by Molmil
Full-Length Hammerhead Ribozyme with G12A substitution at the general base position
分子名称: HAMMERHEAD RIBOZYME, ENZYME STRAND, SUBSTRATE STRAND
著者Scott, W.G, Schultz, E.
登録日2012-11-24
公開日2012-12-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and Catalytic Effects of an Invariant Purine Substitution in the Hammerhead Ribozyme: Implications for the Mechanism of Acid-Base Catalysis.
Acta Crystallogr.,Sect.D, 70, 2014
359D
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BU of 359d by Molmil
INHIBITION OF THE HAMMERHEAD RIBOZYME CLEAVAGE REACTION BY SITE-SPECIFIC BINDING OF TB(III)
分子名称: RNA HAMMERHEAD RIBOZYME, TERBIUM(III) ION
著者Feig, A.L, Scott, W.G, Uhlenbeck, O.C.
登録日1997-10-27
公開日1997-11-07
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Inhibition of the hammerhead ribozyme cleavage reaction by site-specific binding of Tb.
Science, 279, 1998
2VMK
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BU of 2vmk by Molmil
Crystal Structure of E. coli RNase E Apoprotein - Catalytic Domain
分子名称: RIBONUCLEASE E, SULFATE ION, ZINC ION
著者Koslover, D.J, Callaghan, A.J, Marcaida, M.J, Martick, M, Scott, W.G, Luisi, B.F.
登録日2008-01-28
公開日2008-07-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The Crystal Structure of the Escherichia Coli Rnase E Apoprotein and a Mechanism for RNA Degradation.
Structure, 16, 2008
2VRT
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BU of 2vrt by Molmil
Crystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic Domain
分子名称: 5'-R(*UP*UP)-3', 5'-R(*UP*UP*GP)-3', RIBONUCLEASE E, ...
著者Koslover, D.J, Callaghan, A.J, Marcaida, M.J, Garman, E.F, Martick, M, Scott, W.G, Luisi, B.F.
登録日2008-04-14
公開日2008-07-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The Crystal Structure of the Escherichia Coli Rnase E Apoprotein and a Mechanism for RNA Degradation.
Structure, 16, 2008
5UNE
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BU of 5une by Molmil
Dimerized Structure Gives Further Insight Into the Function of the Novel RNA Gene: HAR1
分子名称: MAGNESIUM ION, RNA (47-MER)
著者Lares, M, Scott, W.G.
登録日2017-01-30
公開日2017-03-29
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.900099 Å)
主引用文献Dimerized Structure Gives Further Insight Into the Function of the Novel RNA Gene: HAR1
To Be Published
4RJ1
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BU of 4rj1 by Molmil
Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions
分子名称: CALCIUM ION, RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), SODIUM ION, ...
著者Fyfe, A.C, Dunten, P.W, Scott, W.G.
登録日2014-10-08
公開日2014-11-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (0.92 Å)
主引用文献Structural Variations and Solvent Structure of r(UGGGGU) Quadruplexes Stabilized by Sr(2+) Ions.
J.Mol.Biol., 427, 2015
4RKV
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BU of 4rkv by Molmil
Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions
分子名称: CALCIUM ION, RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), SODIUM ION, ...
著者Fyfe, A.C, Dunten, P.W, Scott, W.G.
登録日2014-10-14
公開日2014-11-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (0.88 Å)
主引用文献Structural Variations and Solvent Structure of r(UGGGGU) Quadruplexes Stabilized by Sr(2+) Ions.
J.Mol.Biol., 427, 2015
4RNE
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BU of 4rne by Molmil
Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions
分子名称: CALCIUM ION, RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), SODIUM ION, ...
著者Fyfe, A.C, Dunten, P.W, Scott, W.G.
登録日2014-10-24
公開日2014-11-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Structural Variations and Solvent Structure of r(UGGGGU) Quadruplexes Stabilized by Sr(2+) Ions.
J.Mol.Biol., 427, 2015
379D
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BU of 379d by Molmil
THE STRUCTURAL BASIS OF HAMMERHEAD RIBOZYME SELF-CLEAVAGE
分子名称: COBALT (II) ION, RNA (5'-R(*GP*GP*CP*CP*GP*AP*AP*AP*CP*UP*CP*GP*UP*AP*AP*GP*A P*GP*UP*CP*AP*CP*CP*AP*C)-3'), RNA (5'-R(*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3')
著者Murray, J.B, Terwey, D.P, Maloney, L, Karpeisky, A, Usman, N, Beigelman, L, Scott, W.G.
登録日1998-02-05
公開日1998-02-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The structural basis of hammerhead ribozyme self-cleavage.
Cell(Cambridge,Mass.), 92, 1998
1XJR
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BU of 1xjr by Molmil
The Structure of a Rigorously Conserved RNA Element Within the SARS Virus Genome
分子名称: MAGNESIUM ION, s2m RNA
著者Robertson, M.P, Igel, H, Baertsch, R, Haussler, D, Ares Jr, M, Scott, W.G.
登録日2004-09-24
公開日2005-02-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structure of a rigorously conserved RNA element within the SARS virus genome
Plos Biol., 3, 2005
1Y28
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BU of 1y28 by Molmil
Crystal structure of the R220A metBJFIXL HEME domain
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Sensor protein fixL
著者Dunham, C.M, Dioum, E.M, Tuckerman, J.R, Gonzalez, G, Scott, W.G, Gilles-Gonzalez, M.A.
登録日2004-11-21
公開日2004-12-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A distal arginine in the oxygen-sensing heme-PAS domains is essential to ligand binding, signal transduction, and structure
Biochemistry, 42, 2003
3ZP8
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BU of 3zp8 by Molmil
HIGH-RESOLUTION FULL-LENGTH HAMMERHEAD RIBOZYME
分子名称: HAMMERHEAD RIBOZYME, ENZYME STRAND, SUBSTRATE STRAND, ...
著者Anderson, M, Schultz, E, Martick, M, Scott, W.G.
登録日2013-02-26
公開日2013-03-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Active-Site Monovalent Cations Revealed in a 1.55 A Resolution Hammerhead Ribozyme Structure
J.Mol.Biol., 425, 2013
488D
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BU of 488d by Molmil
CATALYTIC RNA ENZYME-PRODUCT COMPLEX
分子名称: CADMIUM ION, FIRST RNA FRAGMENT OF CLEAVED SUBSTRATE, RNA RIBOZYME STRAND, ...
著者Murray, J.B, Szoke, H, Szoke, A, Scott, W.G.
登録日2000-02-25
公開日2000-03-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Capture and visualization of a catalytic RNA enzyme-product complex using crystal lattice trapping and X-ray holographic reconstruction.
Mol.Cell, 5, 2000
2OEU
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BU of 2oeu by Molmil
Full-length hammerhead ribozyme with Mn(II) bound
分子名称: 5'-R(*GP*GP*CP*GP*UP*(OMC)P*CP*UP*GP*GP*(5BU)P*AP*UP*CP*CP*AP*AP*UP*CP*(DC))-3', Hammerhead Ribozyme, MANGANESE (II) ION
著者Martick, M, Scott, W.G.
登録日2007-01-01
公開日2007-02-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Solvent structure and hammerhead ribozyme catalysis.
Chem.Biol., 15, 2008
2OIU
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BU of 2oiu by Molmil
L1 Ribozyme Ligase circular adduct
分子名称: L1 Ribozyme RNA Ligase, MAGNESIUM ION
著者Robertson, M.P, Scott, W.G.
登録日2007-01-11
公開日2007-03-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The structural basis of ribozyme-catalyzed RNA assembly.
Science, 315, 2007
2BX2
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BU of 2bx2 by Molmil
Catalytic domain of E. coli RNase E
分子名称: MAGNESIUM ION, RIBONUCLEASE E, RNA (5'-R(*UP*UP*UP*AP*CP*AP*GP*UP*AP*UP*UP* UP*GP*UP*U)-3'), ...
著者Marcaida, M.J, Callaghan, A.J, Scott, W.G, Luisi, B.F.
登録日2005-07-21
公開日2005-10-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure of E. Coli Rnase E Catalytic Domain and Implications for RNA Processing and Turnover
Nature, 437, 2005
2C0B
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BU of 2c0b by Molmil
Catalytic domain of E. coli RNase E in complex with 13-mer RNA
分子名称: 5'-R(*UP*UP*UP*AP*CP*AP*GP*UP*AP*UP*UP*UP*G)-3', MAGNESIUM ION, RIBONUCLEASE E, ...
著者Marcaida, M.J, Callaghan, A.J, Scott, W.G, Luisi, B.F.
登録日2005-08-30
公開日2005-10-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Structure of E. Coli Rnase E Catalytic Domain and Implications for RNA Processing and Turnover
Nature, 437, 2005
2QUS
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BU of 2qus by Molmil
Hammerhead Ribozyme G12A mutant pre-cleavage
分子名称: Hammerhead ribozyme, MAGNESIUM ION
著者Chi, Y.I, Scott, W.G, Kim, S.H.
登録日2007-08-06
公開日2008-07-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Capturing hammerhead ribozyme structures in action by modulating general base catalysis.
Plos Biol., 6, 2008
2QUW
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BU of 2quw by Molmil
Hammerhead Ribozyme G12A mutant after cleavage
分子名称: Hammerhead ribozyme, cleaved fragment, MAGNESIUM ION
著者Chi, Y.I, Scott, W.G, Kim, S.H.
登録日2007-08-06
公開日2008-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Capturing hammerhead ribozyme structures in action by modulating general base catalysis.
Plos Biol., 6, 2008
1NYI
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BU of 1nyi by Molmil
Crosslinked Hammerhead Ribozyme Initial State
分子名称: 5'-R(*GP*CP*CP*GP*AP*AP*AP*CP*UP*CP*GP*UP*AP*AP*GP*AP*GP*UP*CP*AP*CP*CP*AP*C)-3', 5'-R(P*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3', COBALT (II) ION, ...
著者Dunham, C.M, Murray, J.B, Scott, W.G.
登録日2003-02-12
公開日2004-02-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献A helical twist-induced conformational switch activates cleavage in the hammerhead ribozyme.
J.Mol.Biol., 332, 2003
1Q29
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BU of 1q29 by Molmil
Hammerhead Ribozyme with 5'-5' G-G linkage: Conformational change experiment
分子名称: 5'-R(*GP*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3', COBALT (II) ION, Ribozyme
著者Dunham, C.M, Murray, J.B, Scott, W.G.
登録日2003-07-23
公開日2004-02-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A helical twist-induced conformational switch activates cleavage in the hammerhead ribozyme.
J.Mol.Biol., 332, 2003

 

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