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4H40
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BU of 4h40 by Molmil
Crystal structure of a putative cell adhesion protein (BF2867) from Bacteroides fragilis NCTC 9343 at 2.57 A resolution
Descriptor: CHLORIDE ION, putative cell adhesion protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2012-09-14
Release date:2012-10-03
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
1IO4
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BU of 1io4 by Molmil
CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN-CBFBETA CORE DOMAIN HETERODIMER AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
Descriptor: CAAT/ENHANCER BINDING PROTEIN BETA, CORE-BINDING FACTOR, BETA SUBUNIT, ...
Authors:Tahirov, T.H, Ogata, K.
Deposit date:2001-01-10
Release date:2001-03-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural analyses of DNA recognition by the AML1/Runx-1 Runt domain and its allosteric control by CBFbeta.
Cell(Cambridge,Mass.), 104, 2001
4GPV
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BU of 4gpv by Molmil
Crystal structure of a putative cell adhesion protein (BACEGG_00536) from Bacteroides eggerthii DSM 20697 at 1.67 A resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, putative cell adhesion protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2012-08-21
Release date:2012-09-19
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
4JG5
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BU of 4jg5 by Molmil
Crystal structure of a putative cell adhesion protein (BDI_3519) from Parabacteroides distasonis ATCC 8503 at 2.34 A resolution (PSI Community Target, Nakayama)
Descriptor: Putative cell adhesion protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2013-02-28
Release date:2013-03-20
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
4JRF
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BU of 4jrf by Molmil
Crystal structure of a putative cell adhesion protein (BACOVA_01548) from Bacteroides ovatus ATCC 8483 at 1.98 A resolution (PSI Community Target, Nakayama)
Descriptor: CALCIUM ION, CHLORIDE ION, SULFATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2013-03-21
Release date:2013-04-03
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
4K4K
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BU of 4k4k by Molmil
Crystal structure of a putative cell adhesion protein (BACUNI_00621) from Bacteroides uniformis ATCC 8492 at 1.67 A resolution
Descriptor: CHLORIDE ION, Putative cell adhesion protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2013-04-12
Release date:2013-05-01
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
5GXQ
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BU of 5gxq by Molmil
The crystal structure of the nucleosome containing H3.6
Descriptor: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Taguchi, H, Xie, Y, Horikoshi, N, Kurumizaka, H.
Deposit date:2016-09-19
Release date:2017-04-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal Structure and Characterization of Novel Human Histone H3 Variants, H3.6, H3.7, and H3.8
Biochemistry, 56, 2017
7XWA
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BU of 7xwa by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 Omicron BA.4/5 variant spike protein in complex with its receptor ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
Authors:Suzuki, T, Kimura, K, Hashiguchi, T.
Deposit date:2022-05-26
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.36 Å)
Cite:Virological characteristics of the SARS-CoV-2 Omicron BA.2 subvariants, including BA.4 and BA.5.
Cell, 185, 2022
4YBG
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BU of 4ybg by Molmil
Crystal structure of the MAEL domain of Drosophila melanogaster Maelstrom
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Protein maelstrom, ...
Authors:Matsumoto, N, Ishitani, R, Nishimasu, H, Nureki, O.
Deposit date:2015-02-18
Release date:2015-04-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Crystal Structure and Activity of the Endoribonuclease Domain of the piRNA Pathway Factor Maelstrom
Cell Rep, 11, 2015
3GF8
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BU of 3gf8 by Molmil
Crystal structure of putative polysaccharide binding proteins (DUF1812) (NP_809975.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.20 A resolution
Descriptor: 1,2-ETHANEDIOL, putative polysaccharide binding proteins (DUF1812)
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-02-26
Release date:2009-03-24
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A conserved fold for fimbrial components revealed by the crystal structure of a putative fimbrial assembly protein (BT1062) from Bacteroides thetaiotaomicron at 2.2 A resolution
Acta Crystallogr.,Sect.F, 66, 2010
5CAG
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BU of 5cag by Molmil
Crystal structure of a putative adhesin (BACOVA_02677) from Bacteroides ovatus ATCC 8483 at 3.00 A resolution (PSI Community Target, Nakayama)
Descriptor: SULFATE ION, Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG), Nakayama, K.
Deposit date:2015-06-29
Release date:2015-10-14
Last modified:2020-04-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
3A58
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BU of 3a58 by Molmil
Crystal structure of Sec3p - Rho1p complex from Saccharomyces cerevisiae
Descriptor: Exocyst complex component SEC3, GTP-binding protein RHO1, MAGNESIUM ION, ...
Authors:Yamashita, M, Sato, Y, Yamagata, A, Mimura, H, Yoshikawa, A, Fukai, S.
Deposit date:2009-08-03
Release date:2010-01-12
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the Rho- and phosphoinositide-dependent localization of the exocyst subunit Sec3
Nat.Struct.Mol.Biol., 17, 2010
7C03
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BU of 7c03 by Molmil
Crystal structure of POLArISact(T57S), genetically encoded probe for fluorescent polarization
Descriptor: POLArISact(T57S)
Authors:Tomabechi, Y, Sakai, N, Shirouzu, M.
Deposit date:2020-04-30
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:POLArIS, a versatile probe for molecular orientation, revealed actin filaments associated with microtubule asters in early embryos.
Proc.Natl.Acad.Sci.USA, 118, 2021
8K4Z
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BU of 8k4z by Molmil
Crystal structure of human MMP-7 in complex with inhibitor
Descriptor: CALCIUM ION, CHLORIDE ION, IODIDE ION, ...
Authors:Kamitani, M, Mima, M, Oka, Y.
Deposit date:2023-07-20
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of TP0628103: A Selective MMP-7 Inhibitor Based on the Mitigation of OATP Substrate Recognition through Isoelectric Point Shift Strategy
To Be Published
1GZA
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BU of 1gza by Molmil
PEROXIDASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, IODIDE ION, ...
Authors:Fukuyama, K, Itakura, H.
Deposit date:1996-11-13
Release date:1997-03-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Binding of iodide to Arthromyces ramosus peroxidase investigated with X-ray crystallographic analysis, 1H and 127I NMR spectroscopy, and steady-state kinetics.
J.Biol.Chem., 272, 1997
1TCJ
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BU of 1tcj by Molmil
STRUCTURE-ACTIVITY RELATIONSHIPS OF MU-CONOTOXIN GIIIA: STRUCTURE DETERMINATION OF ACTIVE AND INACTIVE SODIUM CHANNEL BLOCKER PEPTIDES BY NMR AND SIMULATED ANNEALING CALCULATIONS
Descriptor: MU-CONOTOXIN GIIIA
Authors:Kohda, D, Lancelin, J.-M, Inagaki, F, Wakamatsu, K.
Deposit date:1992-12-12
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Structure-activity relationships of mu-conotoxin GIIIA: structure determination of active and inactive sodium channel blocker peptides by NMR and simulated annealing calculations.
Biochemistry, 31, 1992
1TCG
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BU of 1tcg by Molmil
STRUCTURE-ACTIVITY RELATIONSHIPS OF MU-CONOTOXIN GIIIA: STRUCTURE DETERMINATION OF ACTIVE AND INACTIVE SODIUM CHANNEL BLOCKER PEPTIDES BY NMR AND SIMULATED ANNEALING CALCULATIONS
Descriptor: MU-CONOTOXIN GIIIA
Authors:Kohda, D, Lancelin, J.-M, Inagaki, F, Wakamatsu, K.
Deposit date:1992-12-12
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Structure-activity relationships of mu-conotoxin GIIIA: structure determination of active and inactive sodium channel blocker peptides by NMR and simulated annealing calculations.
Biochemistry, 31, 1992
1TCH
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BU of 1tch by Molmil
STRUCTURE-ACTIVITY RELATIONSHIPS OF MU-CONOTOXIN GIIIA: STRUCTURE DETERMINATION OF ACTIVE AND INACTIVE SODIUM CHANNEL BLOCKER PEPTIDES BY NMR AND SIMULATED ANNEALING CALCULATIONS
Descriptor: MU-CONOTOXIN GIIIA
Authors:Lancelin, J.-M, Kohda, D, Inagaki, F.
Deposit date:1992-12-12
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Structure-activity relationships of mu-conotoxin GIIIA: structure determination of active and inactive sodium channel blocker peptides by NMR and simulated annealing calculations.
Biochemistry, 31, 1992
1TCK
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BU of 1tck by Molmil
STRUCTURE-ACTIVITY RELATIONSHIPS OF MU-CONOTOXIN GIIIA: STRUCTURE DETERMINATION OF ACTIVE AND INACTIVE SODIUM CHANNEL BLOCKER PEPTIDES BY NMR AND SIMULATED ANNEALING CALCULATIONS
Descriptor: MU-CONOTOXIN GIIIA
Authors:Lancelin, J.-M, Kohda, D, Inagaki, F.
Deposit date:1992-12-12
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Structure-activity relationships of mu-conotoxin GIIIA: structure determination of active and inactive sodium channel blocker peptides by NMR and simulated annealing calculations.
Biochemistry, 31, 1992
1GVD
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BU of 1gvd by Molmil
CRYSTAL STRUCTURE OF C-MYB R2 V103L MUTANT
Descriptor: AMMONIUM ION, MYB PROTO-ONCOGENE PROTEIN, SULFATE ION
Authors:Tahirov, T.H, Ogata, K.
Deposit date:2002-02-08
Release date:2003-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure of C-Myb DNA-Binding Domain: Specific Na+ Binding and Correlation with NMR Structure
To be Published
7WXX
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BU of 7wxx by Molmil
Crystal structure of human MMP-7 in complex with inhibitor
Descriptor: CALCIUM ION, Matrilysin, Peptide Inhibitor, ...
Authors:Kamitani, M, Oka, Y, Tabuse, H.
Deposit date:2022-02-15
Release date:2022-10-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Discovery of Highly Potent and Selective Matrix Metalloproteinase-7 Inhibitors by Hybridizing the S1' Subsite Binder with Short Peptides.
J.Med.Chem., 65, 2022
1IXD
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BU of 1ixd by Molmil
Solution structure of the CAP-GLY domain from human cylindromatosis tomour-suppressor CYLD
Descriptor: Cylindromatosis tumour-suppressor CYLD
Authors:Saito, K, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-06-19
Release date:2002-12-19
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The CAP-Gly domain of CYLD associates with the proline-rich sequence in NEMO/IKKgamma
STRUCTURE, 12, 2004
5B5O
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BU of 5b5o by Molmil
Crystal structure of the catalytic domain of MMP-13 complexed with N-phenyl-4-((4H-1,2,4-triazol-3-ylsulfanyl)methyl)-1,3-thiazol-2-amine
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Collagenase 3, ...
Authors:Oki, H, Tanaka, Y.
Deposit date:2016-05-13
Release date:2017-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Discovery of Novel, Highly Potent, and Selective Matrix Metalloproteinase (MMP)-13 Inhibitors with a 1,2,4-Triazol-3-yl Moiety as a Zinc Binding Group Using a Structure-Based Design Approach
J. Med. Chem., 60, 2017
5B5P
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BU of 5b5p by Molmil
Crystal structure of the catalytic domain of MMP-13 complexed with 4-oxo-N-(3-(2-(1H-1,2,4-triazol-3-ylsulfanyl)ethoxy)benzyl)-3,4-dihydroquinazoline-2-carboxamide
Descriptor: 4-oxo-N-{3-[2-(1H-1,2,4-triazol-3-ylsulfanyl)ethoxy]benzyl}-3,4-dihydroquinazoline-2-carboxamide, CALCIUM ION, Collagenase 3, ...
Authors:Oki, H, Tanaka, Y.
Deposit date:2016-05-13
Release date:2017-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery of Novel, Highly Potent, and Selective Matrix Metalloproteinase (MMP)-13 Inhibitors with a 1,2,4-Triazol-3-yl Moiety as a Zinc Binding Group Using a Structure-Based Design Approach
J. Med. Chem., 60, 2017
6IXF
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BU of 6ixf by Molmil
Crystal structure of SeMet apo SH3BP5 (P41)
Descriptor: SH3 domain-binding protein 5
Authors:Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S.
Deposit date:2018-12-10
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis of guanine nucleotide exchange for Rab11 by SH3BP5.
Life Sci Alliance, 2, 2019

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