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6VQC
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Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 1 (from focused refinement)
分子名称: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-04
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQG
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BU of 6vqg by Molmil
Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 2 (from focused refinement)
分子名称: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-05
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQK
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BU of 6vqk by Molmil
Mammalian V-ATPase from rat brain collar and peripheral stalks rotational state 3 (from focused refinement)
分子名称: V-type proton ATPase 116 kDa subunit a isoform 1, V-type proton ATPase subunit C 1, V-type proton ATPase subunit E 1, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-05
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQ8
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BU of 6vq8 by Molmil
Mammalian V-ATPase from rat brain - composite model of rotational state 3 bound to ADP and SidK (built from focused refinement models)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2020-02-04
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6WLZ
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BU of 6wlz by Molmil
The V1 region of human V-ATPase in state 1 (focused refinement)
分子名称: ADENOSINE-5'-DIPHOSPHATE, SidK, V-type proton ATPase catalytic subunit A, ...
著者Wang, L, Wu, H, Fu, T.M.
登録日2020-04-20
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structures of a Complete Human V-ATPase Reveal Mechanisms of Its Assembly.
Mol.Cell, 80, 2020
6WM4
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BU of 6wm4 by Molmil
Human V-ATPase in state 3 with SidK and ADP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, Renin receptor, ...
著者Wang, L, Wu, H, Fu, T.M.
登録日2020-04-20
公開日2020-11-11
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structures of a Complete Human V-ATPase Reveal Mechanisms of Its Assembly.
Mol.Cell, 80, 2020
6WTI
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BU of 6wti by Molmil
The Cryo-EM structure of the ubiquinol oxidase from Escherichia coli
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, COPPER (II) ION, Cytochrome o ubiquinol oxidase, ...
著者Su, C.-C.
登録日2020-05-02
公開日2021-01-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.38 Å)
主引用文献A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
6WU0
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BU of 6wu0 by Molmil
CryoEM structure of Burkholderia pseudomallei hopanoid biosynthesis-associated RND transporter HpnN
分子名称: Hopanoid biosynthesis associated RND transporter like protein HpnN
著者Lyu, M, Yu, E.W.
登録日2020-05-04
公開日2021-02-03
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.59 Å)
主引用文献A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
6WLW
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BU of 6wlw by Molmil
The Vo region of human V-ATPase in state 1 (focused refinement)
分子名称: (2~{S})-2-$l^{4}-azanyl-3-[[(2~{R})-3-octadecanoyloxy-2-oxidanyl-propoxy]-oxidanyl-oxidanylidene-$l^{6}-phosphanyl]oxy-propanoic acid, 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wang, L, Wu, H, Fu, T.-M.
登録日2020-04-20
公開日2020-11-11
最終更新日2020-11-25
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures of a Complete Human V-ATPase Reveal Mechanisms of Its Assembly.
Mol.Cell, 80, 2020
6WM2
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BU of 6wm2 by Molmil
Human V-ATPase in state 1 with SidK and ADP
分子名称: (2~{S})-2-$l^{4}-azanyl-3-[[(2~{R})-3-octadecanoyloxy-2-oxidanyl-propoxy]-oxidanyl-oxidanylidene-$l^{6}-phosphanyl]oxy-propanoic acid, 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wang, L, Wu, H, Fu, T.M.
登録日2020-04-20
公開日2020-11-11
最終更新日2020-11-25
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structures of a Complete Human V-ATPase Reveal Mechanisms of Its Assembly.
Mol.Cell, 80, 2020
6WU6
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BU of 6wu6 by Molmil
succinate-coenzyme Q reductase
分子名称: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Lyu, M, Su, C.-C, Morgan, C.E, Yu, E.W.
登録日2020-05-04
公開日2021-02-03
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
6WM3
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BU of 6wm3 by Molmil
Human V-ATPase in state 2 with SidK and ADP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, Renin receptor, ...
著者Wang, L, Wu, H, Fu, T.M.
登録日2020-04-20
公開日2020-11-11
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of a Complete Human V-ATPase Reveal Mechanisms of Its Assembly.
Mol.Cell, 80, 2020
6WTZ
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BU of 6wtz by Molmil
Cryo-EM structure of E. Coli OmpF
分子名称: Outer membrane porin F
著者Morgan, C.E, Su, C.-C, Lyu, M, Yu, E.W.
登録日2020-05-04
公開日2021-01-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
2XWR
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BU of 2xwr by Molmil
Crystal structure of the DNA-binding domain of human p53 with extended N terminus
分子名称: CELLULAR TUMOR ANTIGEN P53, ZINC ION
著者Joerger, A.C, Natan, E, Fersht, A.R.
登録日2010-11-04
公開日2011-03-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Interaction of the P53 DNA-Binding Domain with its N-Terminal Extension Modulates the Stability of the P53 Tetramer.
J.Mol.Biol., 409, 2011
6WNQ
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BU of 6wnq by Molmil
E. coli ATP Synthase State 2a
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Stewart, A.G, Sobti, M, Walshe, J.L.
登録日2020-04-23
公開日2020-06-03
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch.
Nat Commun, 11, 2020
6WNR
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BU of 6wnr by Molmil
E. coli ATP synthase State 3b
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Stewart, A.G, Sobti, M, Walshe, J.L.
登録日2020-04-23
公開日2020-06-03
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch.
Nat Commun, 11, 2020
2Y3W
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BU of 2y3w by Molmil
N-terminal head domain and beginning of coiled coil domain of Danio rerio SAS-6
分子名称: SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG
著者van Breugel, M.
登録日2010-12-27
公開日2011-02-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structures of SAS-6 suggest its organization in centrioles.
Science, 331, 2011
2Y3V
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BU of 2y3v by Molmil
N-terminal head domain of Danio rerio SAS-6
分子名称: SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG
著者van Breugel, M.
登録日2010-12-27
公開日2011-02-09
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structures of SAS-6 suggest its organization in centrioles.
Science, 331, 2011
2YBG
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BU of 2ybg by Molmil
Structure of Lys120-acetylated p53 core domain
分子名称: CELLULAR TUMOR ANTIGEN P53, ZINC ION
著者Arbely, E, Allen, M.D, Joerger, A.C, Fersht, A.R.
登録日2011-03-08
公開日2011-05-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Acetylation of Lysine 120 of P53 Endows DNA- Binding Specificity at Effective Physiological Salt Concentration.
Proc.Natl.Acad.Sci.USA, 108, 2011
6Y5V
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BU of 6y5v by Molmil
Structure of Human Potassium Chloride Transporter KCC3b (S45D/T940D/T997D) in KCl
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Solute carrier family 12 member 6, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Chi, G, Man, H, Ebenhoch, R, Reggiano, G, Pike, A.C.W, Wang, D, McKinley, G, Mukhopadhyay, S.M.M, MacLean, E.M, Chalk, R, Moreau, C, Snee, M, Bohstedt, T, Singh, N.K, Abrusci, P, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Marsden, B.D, Burgess-Brown, N.A, DiMaio, F, Duerr, K.L.
登録日2020-02-25
公開日2020-07-15
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (4.08 Å)
主引用文献Phospho-regulation, nucleotide binding and ion access control in potassium-chloride cotransporters.
Embo J., 40, 2021
6Y0P
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BU of 6y0p by Molmil
isopenicillin N synthase in complex with IPN and Fe using FT-SSX methods
分子名称: FE (III) ION, ISOPENICILLIN N, Isopenicillin N synthase, ...
著者Rabe, P, Beale, J.H, Lang, P.A, Dirr, A.S, Leissing, T.M, Butryn, A, Aller, P, Kamps, J.J.A.G, Axford, D, McDonough, M.A, Orville, A.M, Owen, R, Schofield, C.J.
登録日2020-02-10
公開日2021-02-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献X-ray free-electron laser studies reveal correlated motion during isopenicillin N synthase catalysis.
Sci Adv, 7, 2021
2ZQQ
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BU of 2zqq by Molmil
Crystal structure of human AUH (3-methylglutaconyl-coa hydratase) mixed with (AUUU)24A RNA
分子名称: Methylglutaconyl-CoA hydratase
著者Kurimoto, K, Kuwasako, K, Muto, Y, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-08-16
公開日2009-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献AU-rich RNA-binding induces changes in the quaternary structure of AUH
Proteins, 75, 2009
6Z3Y
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BU of 6z3y by Molmil
CryoEM structure of horse sodium/proton exchanger NHE9 in an inward-facing conformation
分子名称: Sodium/hydrogen exchanger
著者Winkelmannm, I, Matsuoka, R, Meier, P, Drew, D.
登録日2020-05-22
公開日2020-11-04
最終更新日2021-03-17
実験手法ELECTRON MICROSCOPY (3.51 Å)
主引用文献Structure and elevator mechanism of the mammalian sodium/proton exchanger NHE9.
Embo J., 39, 2020
6Z7P
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BU of 6z7p by Molmil
Composite model of the Caulobacter crescentus S-layer bound to the O-antigen of lipopolysaccharide
分子名称: 4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose, CALCIUM ION, S-layer protein
著者Bharat, T.A.M, von Kugelgen, A.
登録日2020-06-01
公開日2020-07-15
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献In Situ Structure of an Intact Lipopolysaccharide-Bound Bacterial Surface Layer.
Cell, 180, 2020
2ZQR
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BU of 2zqr by Molmil
Crystal structure of AUH without RNA
分子名称: Methylglutaconyl-CoA hydratase
著者Kurimoto, K, Kuwasako, K, Muto, Y, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-08-16
公開日2009-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献AU-rich RNA-binding induces changes in the quaternary structure of AUH
Proteins, 75, 2009

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