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3ODG
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BU of 3odg by Molmil
crystal structure of xanthosine phosphorylase bound with xanthine from Yersinia pseudotuberculosis
Descriptor: CHLORIDE ION, XANTHINE, Xanthosine phosphorylase
Authors:Kim, J, Ramagopal, U.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-08-11
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:crystal structure of xanthosine phosphorylase bound with xanthine from Yersinia pseudotuberculosis
To be Published
3OF3
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BU of 3of3 by Molmil
Crystal structure of PNP with an inhibitor DADME_immH from Vibrio cholerae
Descriptor: 7-[[(3R,4R)-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-ium-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one, PHOSPHATE ION, Purine nucleoside phosphorylase deoD-type 1
Authors:Kim, J, Ramagopal, U.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-08-13
Release date:2010-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of PNP with an inhibitor DADME_immH from Vibrio cholerae
To be Published
3OCC
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BU of 3occ by Molmil
Crystal structure of PNP with DADMEimmH from Yersinia pseudotuberculosis
Descriptor: 7-[[(3R,4R)-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-ium-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one, PHOSPHATE ION, Purine nucleoside phosphorylase deoD-type
Authors:Kim, J, Ramagopal, U.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-08-09
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:crystal structure of PNP with DADMEimmH from Yersinia pseudotuberculosis
To be Published
3OHP
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BU of 3ohp by Molmil
Crystal structure of HGPRT from Vibrio cholerae
Descriptor: Hypoxanthine phosphoribosyltransferase
Authors:Kim, J, Ramagopal, U.A, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-08-17
Release date:2010-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of HGPRT from Vibrio cholerae
To be Published
3QNM
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BU of 3qnm by Molmil
Haloalkane Dehalogenase Family Member from Bacteroides thetaiotaomicron of Unknown Function
Descriptor: CHLORIDE ION, Haloacid dehalogenase-like hydrolase, MAGNESIUM ION
Authors:Matthew, M.W, Ramagopal, U.A, Toro, R, Dickey, M, Sauder, J.M, Poulter, C.D, Burley, S.K, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-02-08
Release date:2011-03-30
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Haloalkane Dehalogenase Family Member from Bacteroides thetaiotaomicron of Unknown Function
To be Published
3RP1
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BU of 3rp1 by Molmil
Crystal structure of Human LAIR-1 in C2 space group
Descriptor: Leukocyte-associated immunoglobulin-like receptor 1
Authors:Sampathkumar, P, Ramagopal, U.A, Yan, Q, Toro, R, Nathenson, S, Bonanno, J, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-04-26
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Human LAIR-1 in C2 space group
To be Published
3RBG
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BU of 3rbg by Molmil
Crystal structure analysis of Class-I MHC restricted T-cell associated molecule
Descriptor: Cytotoxic and regulatory T-cell molecule, PHOSPHATE ION
Authors:Rubinstein, R, Ramagopal, U.A, Toro, R, Nathenson, S.G, Fiser, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2011-03-29
Release date:2011-05-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Functional classification of immune regulatory proteins.
Structure, 21, 2013
3RNQ
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BU of 3rnq by Molmil
Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and PD-L2
Descriptor: Programmed cell death 1 ligand 2, Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2011-04-22
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and PD-L2
To be Published
3RNK
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BU of 3rnk by Molmil
Crystal structure of the complex between mouse PD-1 mutant and PD-L2 IgV domain
Descriptor: Programmed cell death 1 ligand 2, Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Cao, E, Nathenson, S.G, Almo, S.C.
Deposit date:2011-04-22
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of the complex between mouse PD-1 mutant and PD-L2 IgV domain
To be Published
3GHY
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BU of 3ghy by Molmil
Crystal structure of a putative ketopantoate reductase from Ralstonia solanacearum MolK2
Descriptor: Ketopantoate reductase protein
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Morano, C, Freeman, J, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-04
Release date:2009-03-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a putative ketopantoate reductase from Ralstonia solanacearum MolK2
To be Published
3G7U
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BU of 3g7u by Molmil
Crystal structure of putative DNA modification methyltransferase encoded within prophage Cp-933R (E.coli)
Descriptor: CHLORIDE ION, Cytosine-specific methyltransferase, GLYCEROL
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Gilmore, M, Iizuka, M, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-10
Release date:2009-02-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of DNA Modification Methyltransferase Encoded within Prophage Cp-933R (E.coli)
To be Published
3GD5
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BU of 3gd5 by Molmil
Crystal structure of ornithine carbamoyltransferase from Gloeobacter violaceus
Descriptor: Ornithine carbamoyltransferase
Authors:Fedorov, A.A, Fedorov, E.V, Toro, R, Ramagopal, U.A, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-23
Release date:2009-04-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of ornithine carbamoyltransferase from Gloeobacter violaceus
To be Published
3GRZ
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BU of 3grz by Molmil
CRYSTAL STRUCTURE OF ribosomal protein L11 methylase FROM Lactobacillus delbrueckii subsp. bulgaricus
Descriptor: GLYCEROL, Ribosomal protein L11 methyltransferase
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Morano, C, Freeman, J, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-26
Release date:2009-04-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN 11 METHYLASE FROM Lactobacillus delbrueckii subsp. bulgaricus
To be Published
3GMF
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BU of 3gmf by Molmil
Crystal structure of protein-disulfide isomerase from Novosphingobium aromaticivorans
Descriptor: CHLORIDE ION, Protein-disulfide isomerase
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Morano, C, Freeman, J, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-13
Release date:2009-03-24
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of protein-disulfide isomerase from Novosphingobium aromaticivorans
To be Published
3K12
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BU of 3k12 by Molmil
Crystal structure of an uncharacterized protein A6V7T0 from Pseudomonas aeruginosa
Descriptor: GLYCEROL, uncharacterized protein A6V7T0
Authors:Ho, M, Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-09-25
Release date:2009-10-27
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystal structure of an uncharacterized protein A6V7T0 from Pseudomonas aeruginosa
To be published
2OB3
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BU of 2ob3 by Molmil
Structure of Phosphotriesterase mutant H257Y/L303T
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Parathion hydrolase, ZINC ION
Authors:Kim, J, Ramagopal, U.A, Tsai, P, Raushel, F.M, Almo, S.C.
Deposit date:2006-12-18
Release date:2007-01-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Structure of Phosphotriesterase mutant H257Y/L303T
To be Published
2O4M
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BU of 2o4m by Molmil
Structure of Phosphotriesterase mutant I106G/F132G/H257Y
Descriptor: ACETIC ACID, CACODYLATE ION, GLYCEROL, ...
Authors:Kim, J, Ramagopal, U.A, Tsai, P, Raushel, F.M, Almo, S.C.
Deposit date:2006-12-04
Release date:2007-12-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of Phosphotriesterase mutant I106G/F132G/H257Y
To be Published
2OYP
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BU of 2oyp by Molmil
T Cell Immunoglobulin Mucin-3 Crystal Structure Revealed a Galectin-9-independent Binding Surface
Descriptor: Hepatitis A virus cellular receptor 2, SULFATE ION
Authors:Cao, E, Ramagopal, U.A, Fedorov, A.A, Fedorov, E.V, Nathenson, S.G, Almo, S.C.
Deposit date:2007-02-22
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:T cell immunoglobulin mucin-3 crystal structure reveals a galectin-9-independent ligand-binding surface
Immunity, 26, 2007
2Q1M
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BU of 2q1m by Molmil
Crystal Structure of human GITRL
Descriptor: Tumor necrosis factor ligand superfamily member 18
Authors:Chattopadhyay, K, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2007-05-24
Release date:2007-11-13
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Assembly and structural properties of glucocorticoid-induced TNF receptor ligand: Implications for function.
Proc.Natl.Acad.Sci.USA, 104, 2007
2Q3N
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BU of 2q3n by Molmil
Agglutinin from Abrus Precatorius (APA-I)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Agglutinin-1 A chain, Agglutinin-1 B chain
Authors:Bagaria, A, Surendranath, K, Ramagopal, U.A, Ramakumar, S, Karande, A.A.
Deposit date:2007-05-30
Release date:2007-06-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure-Function Analysis and Insights into the Reduced Toxicity of Abrus precatorius Agglutinin I in Relation to Abrin.
J.Biol.Chem., 281, 2006
2Q91
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BU of 2q91 by Molmil
Structure of the Ca2+-Bound Activated Form of the S100A4 Metastasis Factor
Descriptor: CALCIUM ION, S100A4 Metastasis Factor
Authors:Malashkevich, V.N, Knight, D, Ramagopal, U.A, Almo, S.C, Bresnick, A.R.
Deposit date:2007-06-12
Release date:2008-02-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structure of Ca(2+)-Bound S100A4 and Its Interaction with Peptides Derived from Nonmuscle Myosin-IIA.
Biochemistry, 47, 2008
2QDN
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BU of 2qdn by Molmil
Crystal Structure of mouse GITRL
Descriptor: GITR ligand
Authors:Chattopadhyay, K, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2007-06-21
Release date:2008-01-01
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Evolution of GITRL immune function: murine GITRL exhibits unique structural and biochemical properties within the TNF superfamily.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2R32
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BU of 2r32 by Molmil
Crystal Structure of human GITRL variant
Descriptor: GCN4-pII/Tumor necrosis factor ligand superfamily member 18 fusion protein, SULFATE ION
Authors:Chattopadhyay, K, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2007-08-28
Release date:2007-11-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Assembly and structural properties of glucocorticoid-induced TNF receptor ligand: Implications for function.
Proc.Natl.Acad.Sci.USA, 104, 2007
2R1F
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BU of 2r1f by Molmil
Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli
Descriptor: CADMIUM ION, GLYCEROL, Predicted aminodeoxychorismate lyase, ...
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Meyer, A.J, Rutter, M, Lau, C, Maletic, M, Smith, D, Gheyi, T, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-08-22
Release date:2007-09-04
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal Structure of Predicted Aminodeoxychorismate Lyase from Escherichia coli.
To be Published
2R30
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BU of 2r30 by Molmil
Crystal Structure of human GITRL mutant
Descriptor: Tumor necrosis factor ligand superfamily member 18
Authors:Chattopadhyay, K, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2007-08-28
Release date:2007-11-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Assembly and structural properties of glucocorticoid-induced TNF receptor ligand: Implications for function.
Proc.Natl.Acad.Sci.USA, 104, 2007

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