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8HSF
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BU of 8hsf by Molmil
Insulin triple mutant INS-RQD
Descriptor: Insulin A chain, Insulin B chain
Authors:Kundapura, S.V, Rao, S.S, Kulal, A, Ramagopal, U.A.
Deposit date:2022-12-19
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Insulin triple mutant INS-RQD
To Be Published
8HSK
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BU of 8hsk by Molmil
Insulin single mutant INS-Q
Descriptor: Insulin A chain, Insulin B chain, SULFATE ION
Authors:Rao, S.S, Kundapura, S.V, Kulal, A, Ramagopal, U.A.
Deposit date:2022-12-19
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Insulin single mutant INS-Q
To Be Published
6IGS
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BU of 6igs by Molmil
Crystal structure of HPRT from F. tularensis with Zinc
Descriptor: Hypoxanthine phosphoribosyltransferase, SULFATE ION, ZINC ION
Authors:Pavithra, G.C, Kundapura, S.V, Ramagopal, U.A.
Deposit date:2018-09-25
Release date:2019-10-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of hypoxanthine phosphoribosyltransferase from Francisella tularensis
To be published
6KQC
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BU of 6kqc by Molmil
Crystal structure of E136F mutant of Xanthine-guanine phosphoribosyltransferase from Yersinia pestis
Descriptor: CHLORIDE ION, GLYCEROL, Xanthine phosphoribosyltransferase
Authors:Lankipalli, S, Ramagopal, U.A.
Deposit date:2019-08-16
Release date:2019-09-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of E136F mutant of Xanthine-guanine phosphoribosyltransferase from Yersinia pestis
To be published
6KP5
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BU of 6kp5 by Molmil
crystal structure of Xanthine-guanine phosphoribosyltransferase (XGPRT) from Yersinia pestis in P21212 space group with sulphate ions in the active site
Descriptor: SULFATE ION, Xanthine phosphoribosyltransferase
Authors:Lankipalli, S, Ramagopal, U.A.
Deposit date:2019-08-14
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:crystal structure of Xanthine-guanine phosphoribosyltransferase (XGPRT) from Yersinia pestis in P21212 space group
To be published
4DKY
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BU of 4dky by Molmil
Crystal structure Analysis of N terminal region containing the dimerization domain and DNA binding domain of HU protein(Histone like protein-DNA binding) from Mycobacterium tuberculosis [H37Ra]
Descriptor: DNA-binding protein HU homolog, MANGANESE (II) ION
Authors:Bhowmick, T, Ramagopal, U.A, Ghosh, S, Nagaraja, V, Ramakumar, S.
Deposit date:2012-02-05
Release date:2013-02-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.478 Å)
Cite:Targeting Mycobacterium tuberculosis nucleoid-associated protein HU with structure-based inhibitors
Nat Commun, 5, 2014
4MB6
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BU of 4mb6 by Molmil
Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis.
Descriptor: Adenine phosphoribosyltransferase, SODIUM ION
Authors:Pavithra, G.C, Kim, J, Hegde, R.P, Almo, S.C, Ramagopal, U.A, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-08-19
Release date:2013-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis
To be published
4PT4
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BU of 4pt4 by Molmil
Crystal structure Analysis of N terminal region containing the dimerization domain and DNA binding domain of HU protein(Histone like protein-DNA binding) from Mycobacterium tuberculosis [H37Ra]
Descriptor: DNA-binding protein HU homolog, FORMIC ACID
Authors:Bhowmick, T, Ramagopal, U.A, Ghosh, S, Nagaraja, V, Ramakumar, S.
Deposit date:2014-03-10
Release date:2014-05-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Targeting Mycobacterium tuberculosis nucleoid-associated protein HU with structure-based inhibitors
Nat Commun, 5, 2014
4UC0
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BU of 4uc0 by Molmil
Crystal Structure Of a purine nucleoside phosphorylase (PSI-NYSGRC-029736) from Agrobacterium vitis
Descriptor: HYPOXANTHINE, Purine nucleoside phosphorylase
Authors:Cameron, S.A, Sampathkumar, P, Ramagopal, U.A, Attonito, J, Ahmed, M, Bhosle, R, Bonanno, J, Chamala, S, Chowdhury, S, Glenn, A.S, Hammonds, J, Hillerich, B, Love, J.D, Seidel, R, Stead, M, Toro, R, Wasserman, S.R, Schramm, V.L, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-08-13
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure Of a purine nucleoside phosphorylase (PSI-NYSGRC-029736) from Agrobacterium vitis
To be published
1VRZ
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BU of 1vrz by Molmil
Helix turn helix motif
Descriptor: ACETATE ION, DE NOVO DESIGNED 21 RESIDUE PEPTIDE
Authors:Rudresh, Ramakumar, S, Ramagopal, U.A, Inai, Y, Sahal, D.
Deposit date:2005-10-14
Release date:2005-11-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:De Novo Design and Characterization of a Helical Hairpin Eicosapeptide; Emergence of an Anion Receptor in the Linker Region.
Structure, 12, 2004
1XM5
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BU of 1xm5 by Molmil
Crystal structure of metal-dependent hydrolase ybeY from E. coli, Pfam UPF0054
Descriptor: Hypothetical UPF0054 protein ybeY, NICKEL (II) ION
Authors:Fedorov, A.A, Fedorov, E.V, Shi, W, Ramagopal, U.A, Thirumuruhan, R, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-10-01
Release date:2004-10-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The ybeY protein from Escherichia coli is a metalloprotein.
Acta Crystallogr.,Sect.F, 61, 2005
1YK9
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BU of 1yk9 by Molmil
Crystal structure of a mutant form of the mycobacterial adenylyl cyclase Rv1625c
Descriptor: Adenylate cyclase
Authors:Ketkar, A.D, Shenoy, A.R, Ramagopal, U.A, Visweswariah, S.S, Suguna, K, TB Structural Genomics Consortium (TBSGC)
Deposit date:2005-01-17
Release date:2006-01-24
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Structural Basis for the Role of Nucleotide Specifying Residues in Regulating the Oligomerization of the Rv1625c Adenylyl Cyclase from M.tuberculosis
J.Mol.Biol., 356, 2006
5KZK
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BU of 5kzk by Molmil
Crystal Structure of rRNA methyltransferase from Sinorhizobium meliloti
Descriptor: COBALT (II) ION, Probable RNA methyltransferase, TrmH family, ...
Authors:Dey, D, Hegde, R.P, Almo, S.C, Ramakumar, S, Ramagopal, U.A, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2016-07-25
Release date:2017-08-02
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal Structure of rRNA methyltransferase from Sinorhizobium meliloti
To Be Published
5L0Z
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BU of 5l0z by Molmil
Crystal Structure of AdoMet bound rRNA methyltransferase from Sinorhizobium meliloti
Descriptor: COBALT (II) ION, Probable RNA methyltransferase, TrmH family, ...
Authors:Dey, D, Hegde, R.P, Almo, S.C, Ramakumar, S, Ramagopal, U.A.
Deposit date:2016-07-28
Release date:2017-08-02
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of AdoMet bound rRNA methyltransferase from Sinorhizobium meliloti
To Be Published
3RRA
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BU of 3rra by Molmil
Crystal structure of enolase PRK14017 (target EFI-500653) from Ralstonia pickettii 12J with magnesium bound
Descriptor: CHLORIDE ION, MAGNESIUM ION, Putative D-galactonate dehydratase
Authors:Patskovsky, Y, Ramagopal, U.A, Hillerich, B, Seidel, R.D, Zencheck, W.D, Toro, R, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-04-29
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of enolase PRK14017 from Ralstonia pickettii
To be Published
3RRQ
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BU of 3rrq by Molmil
Crystal structure of the extracellular domain of human PD-1
Descriptor: Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2011-04-29
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the extracellular domain of human PD-1
To be Published
3SBW
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BU of 3sbw by Molmil
Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and human PD-L1
Descriptor: Programmed cell death 1 ligand 1, Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Cao, E, Nathenson, S.G, Almo, S.C.
Deposit date:2011-06-06
Release date:2011-07-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and human PD-L1
To be published
1Q2Y
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BU of 1q2y by Molmil
Crystal structure of the protein YJCF from Bacillus subtilis: a member of the GCN5-related N-acetyltransferase superfamily fold
Descriptor: similar to hypothetical proteins
Authors:Fedorov, A.A, Ramagopal, U.A, Fedorov, E.V, Thirumuruhan, R, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-07-27
Release date:2003-08-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the protein YJCF from Bacillus subtilis: a member of the GCN5-related N-acetyltransferase superfamily
To be Published
1RC6
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BU of 1rc6 by Molmil
Crystal structure of protein Ylba from E. coli, Pfam DUF861
Descriptor: Hypothetical protein ylbA
Authors:Fedorov, A.A, Fedorov, E.V, Thirumuruhan, R, Ramagopal, U.A, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-11-03
Release date:2003-11-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Ylba, hypothetical protein from E.Coli
To be Published
4HYR
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BU of 4hyr by Molmil
Structure of putative Glucarate dehydratase from Acidaminococcus sp. D21 with unusual static disorder
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Hegde, R.P, Toro, R, Burley, S.K, Almo, S.C, Ramagopal, U.A, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-11-14
Release date:2013-02-13
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structure of putative Glucarate dehydratase from Acidaminococcus sp. D21 with unusual static disorder
To be published
4HN8
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BU of 4hn8 by Molmil
Crystal structure of a putative D-glucarate dehydratase from Pseudomonas mendocina ymp
Descriptor: D-glucarate dehydratase, GLYCEROL
Authors:Hegde, R.P, Toro, R, Burley, S.K, Almo, S.C, Ramagopal, U.A, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-10-19
Release date:2012-11-07
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a putative D-glucarate dehydratase from Pseudomonas mendocina ymp
To be published
4JHM
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BU of 4jhm by Molmil
Crystal structure of a putative mandelate racemase/muconate lactonizing enzyme from Pseudovibrio sp.
Descriptor: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein
Authors:Hegde, R.P, Toro, R, Burley, S.K, Almo, S.C, Ramagopal, U.A, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-03-05
Release date:2013-05-01
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a putative mandelate racemase/muconate lactonizing enzyme from Pseudovibrio sp.
To be published
5XTK
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BU of 5xtk by Molmil
Crystal structure of Xanthine-guanine phosphoribosyltransferase from Yersinia pestis
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, SULFATE ION, Xanthine phosphoribosyltransferase
Authors:Pavithra, G.C, Ramagopal, U.A.
Deposit date:2017-06-19
Release date:2018-06-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of Xanthine-guanine phosphoribosyltransferase from Yersinia pestis
To be published
5Y4A
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BU of 5y4a by Molmil
Cadmium directed assembly of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis.
Descriptor: Adenine phosphoribosyltransferase, CADMIUM ION, SODIUM ION, ...
Authors:Pavithra, G.C, Ramagopal, U.A.
Deposit date:2017-08-02
Release date:2018-08-08
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Cadmium directed assembly of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis.
To be published
5YTI
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BU of 5yti by Molmil
Crystal structure of flagellar hook associated protein-3 (HAP-3: Q5ZW61_LEGPH) from Legionella pneumophila
Descriptor: CADMIUM ION, Flagellar hook associated protein type 3 FlgL
Authors:Lankipalli, S, Hegde, R.P, Dey, D, Almo, S.C, Ramagopal, U.A.
Deposit date:2017-11-18
Release date:2018-01-17
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of hook associated protein-3 (HAP-3: Q5ZW61_LEGPH) from Legionella pneumophila
To be published

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