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6KQT
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BU of 6kqt by Molmil
Crystal Structure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein
Descriptor: SODIUM ION, TRIETHYLENE GLYCOL, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yamada, C, Arakawa, T, Pichler, M.J, Abou Hachem, M, Fushinobu, S.
Deposit date:2019-08-18
Release date:2020-06-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways.
Nat Commun, 11, 2020
6KQS
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Crystal Structure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative
Descriptor: GLYCEROL, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, lacto-N-biosidase
Authors:Yamada, C, Arakawa, T, Pichler, M.J, Abou Hachem, M, Fushinobu, S.
Deposit date:2019-08-18
Release date:2020-06-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways.
Nat Commun, 11, 2020
8AXS
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BU of 8axs by Molmil
Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota
Descriptor: 1,2-ETHANEDIOL, 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, CALCIUM ION, ...
Authors:Sakanaka, H, Nielsen, T.S, Pichler, M.J, Nordberg Karlsson, E, Abou Hachem, M, Morth, J.P.
Deposit date:2022-08-31
Release date:2023-03-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Sialidases and fucosidases of Akkermansia muciniphila are crucial for growth on mucin and nutrient sharing with mucus-associated gut bacteria.
Nat Commun, 14, 2023
8AYR
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BU of 8ayr by Molmil
Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota
Descriptor: CALCIUM ION, Coagulation factor 5/8 type domain protein
Authors:Sakanaka, H, Nielsen, T.S, Pichler, M.J, Nordberg Karlsson, E, Abou Hachem, M, Morth, J.P.
Deposit date:2022-09-02
Release date:2023-03-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Sialidases and fucosidases of Akkermansia muciniphila are crucial for growth on mucin and nutrient sharing with mucus-associated gut bacteria.
Nat Commun, 14, 2023
8AXI
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BU of 8axi by Molmil
Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota
Descriptor: 1,2-ETHANEDIOL, 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, CALCIUM ION, ...
Authors:Sakanaka, H, Nielsen, T.S, Pichler, M.J, Nordberg Karlsson, E, Abou Hachem, M, Morth, J.P.
Deposit date:2022-08-31
Release date:2023-03-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Sialidases and fucosidases of Akkermansia muciniphila are crucial for growth on mucin and nutrient sharing with mucus-associated gut bacteria.
Nat Commun, 14, 2023
8AXT
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BU of 8axt by Molmil
Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota
Descriptor: CALCIUM ION, CHLORIDE ION, Sialidase domain-containing protein
Authors:Sakanaka, H, Nielsen, T.S, Pichler, M.J, Nordberg Karlsson, E, Abou Hachem, M, Morth, J.P.
Deposit date:2022-08-31
Release date:2023-03-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Sialidases and fucosidases of Akkermansia muciniphila are crucial for growth on mucin and nutrient sharing with mucus-associated gut bacteria.
Nat Commun, 14, 2023
6Y9T
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BU of 6y9t by Molmil
Family GH13_31 enzyme
Descriptor: Alpha-glucosidase, CALCIUM ION
Authors:Andersen, S, Poulsen, J.C.N, Moeller, M.S, Abou Hachem, M, Lo Leggio, L.
Deposit date:2020-03-10
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:An 1,4-alpha-Glucosyltransferase Defines a New Maltodextrin Catabolism Scheme in Lactobacillus acidophilus.
Appl.Environ.Microbiol., 86, 2020
6FUV
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BU of 6fuv by Molmil
Structure of a manno-oligosaccharide specific solute binding protein, BlMnBP2 from Bifidobacterium animalis subsp. lactis ATCC 27673 in complex with mannotriose
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ACETATE ION, Solute Binding Protein, ...
Authors:Ejby, M, Abou Hachem, M, Guskov, A, Slotboom, D.J.
Deposit date:2018-02-27
Release date:2019-03-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Two binding proteins of the ABC transporter that confers growth of Bifidobacterium animalis subsp. lactis ATCC27673 on beta-mannan possess distinct manno-oligosaccharide-binding profiles.
Mol.Microbiol., 112, 2019
8PXV
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BU of 8pxv by Molmil
Targeting extended blood antigens by Akkermansia muciniphila enzymes unveils a missing link for generating universal donor blood
Descriptor: Beta-N-acetylhexosaminidase, GLYCEROL, SODIUM ION, ...
Authors:Weikum, J, Jensen, M, Abou Hachem, M, Morth, J.P.
Deposit date:2023-07-24
Release date:2024-02-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Akkermansia muciniphila exoglycosidases target extended blood group antigens to generate ABO-universal blood.
Nat Microbiol, 9, 2024
8PVS
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BU of 8pvs by Molmil
Targeting extended blood antigens by Akkermansia muciniphila enzymes unveils a missing link for generating universal donor blood
Descriptor: 1,2-ETHANEDIOL, Alpha-1,3-galactosidase B, CALCIUM ION, ...
Authors:Jensen, M, Abou Hachem, M, Morth, J.P.
Deposit date:2023-07-18
Release date:2024-02-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Akkermansia muciniphila exoglycosidases target extended blood group antigens to generate ABO-universal blood.
Nat Microbiol, 9, 2024
8PXU
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BU of 8pxu by Molmil
Targeting extended blood antigens by Akkermansia muciniphila enzymes unveils a missing link for generating universal donor blood
Descriptor: Beta-N-acetylhexosaminidase, CACODYLATE ION
Authors:Jensen, M, Abou Hachem, M, Morth, J.P.
Deposit date:2023-07-24
Release date:2024-02-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Akkermansia muciniphila exoglycosidases target extended blood group antigens to generate ABO-universal blood.
Nat Microbiol, 9, 2024
8PXT
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BU of 8pxt by Molmil
Targeting extended blood antigens by Akkermansia muciniphila enzymes unveils a missing link for generating universal donor blood
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, Beta-N-acetylhexosaminidase, CHLORIDE ION, ...
Authors:Jensen, M, Abou Hachem, M, Morth, J.P.
Deposit date:2023-07-24
Release date:2024-02-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Akkermansia muciniphila exoglycosidases target extended blood group antigens to generate ABO-universal blood.
Nat Microbiol, 9, 2024
6I5W
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BU of 6i5w by Molmil
BlMnBP1 binding protein of an ABC transporter from Bifidobacterium animalis subsp. lactis ATCC27673 in complex with mannobiose
Descriptor: ACETATE ION, Solute Binding Protein BlMnBP1, Blac_00780 in complex with mannopentaose, ...
Authors:Abou Hachem, M, Ejby, M, Guskov, A, Slotboom, D.J.
Deposit date:2018-11-14
Release date:2019-04-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Two binding proteins of the ABC transporter that confers growth of Bifidobacterium animalis subsp. lactis ATCC27673 on beta-mannan possess distinct manno-oligosaccharide-binding profiles.
Mol.Microbiol., 112, 2019
6I5V
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BU of 6i5v by Molmil
BlMnBP1 binding protein of an ABC transporter from Bifidobacterium animalis subsp. lactis ATCC27673 in complex with mannotriose
Descriptor: Solute Binding Protein, BlMnBP1 in complex with mannotrisoe, ZINC ION, ...
Authors:Abou Hachem, M, Ejby, M, Guskov, A, Slotboom, D.J.
Deposit date:2018-11-14
Release date:2019-04-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Two binding proteins of the ABC transporter that confers growth of Bifidobacterium animalis subsp. lactis ATCC27673 on beta-mannan possess distinct manno-oligosaccharide-binding profiles.
Mol.Microbiol., 112, 2019
6I5R
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BU of 6i5r by Molmil
BlMnBP1 binding protein of an ABC transporter from Bifidobacterium animalis subsp. lactis ATCC27673 in complex with mannobiose
Descriptor: Sugar ABC transporter substrate-binding protein, BlMnBP1, ZINC ION, ...
Authors:Abou Hachem, M, Ejby, M, Guskov, A, Slotboom, D.J.
Deposit date:2018-11-14
Release date:2019-04-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Two binding proteins of the ABC transporter that confers growth of Bifidobacterium animalis subsp. lactis ATCC27673 on beta-mannan possess distinct manno-oligosaccharide-binding profiles.
Mol.Microbiol., 112, 2019

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PDB entries from 2024-06-12

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