1TM9
 
 | | NMR Structure of gene target number gi3844938 from Mycoplasma genitalium: Berkeley Structural Genomics Center | | 分子名称: | Hypothetical protein MG354 | | 著者 | Pelton, J.G, Shi, J, Yokota, H, Kim, R, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC) | | 登録日 | 2004-06-10 | | 公開日 | 2004-08-10 | | 最終更新日 | 2022-03-02 | | 実験手法 | SOLUTION NMR | | 主引用文献 | NMR Structure of Gene Target gi3844938 from Mycoplasma genitalium
To be Published
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1NTC
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3HSF
 | | HEAT SHOCK TRANSCRIPTION FACTOR (HSF) | | 分子名称: | HEAT SHOCK TRANSCRIPTION FACTOR | | 著者 | Damberger, F.F, Pelton, J.G, Liu, C, Cho, H, Harrison, C.J, Nelson, H.C.M, Wemmer, D.E. | | 登録日 | 1995-08-07 | | 公開日 | 1995-11-14 | | 最終更新日 | 2022-03-16 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Refined solution structure and dynamics of the DNA-binding domain of the heat shock factor from Kluyveromyces lactis.
J.Mol.Biol., 254, 1995
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1F4V
 | | CRYSTAL STRUCTURE OF ACTIVATED CHEY BOUND TO THE N-TERMINUS OF FLIM | | 分子名称: | BERYLLIUM TRIFLUORIDE ION, CHEMOTAXIS CHEY PROTEIN, FLAGELLAR MOTOR SWITCH PROTEIN, ... | | 著者 | Lee, S.Y, Cho, H.S, Pelton, J.G, Yan, D, Henderson, R.K, King, D, Huang, L.S, Kustu, S, Berry, E.A, Wemmer, D.E. | | 登録日 | 2000-06-10 | | 公開日 | 2001-01-17 | | 最終更新日 | 2024-02-07 | | 実験手法 | X-RAY DIFFRACTION (2.22 Å) | | 主引用文献 | Crystal structure of an activated response regulator bound to its target.
Nat.Struct.Biol., 8, 2001
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4FTH
 | | Crystal Structure of NtrC4 DNA-binding domain bound to double-stranded DNA | | 分子名称: | 5'-D(*AP*CP*TP*TP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*AP*AP*AP*TP*GP*CP*AP*T)-3', 5'-D(P*GP*AP*TP*GP*CP*AP*TP*TP*TP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*AP*A)-3', Transcriptional regulator (NtrC family) | | 著者 | Vidangos, N.K, Heideker, J, Lyubimov, A.Y, Lamers, M, Huo, Y, Pelton, J.G, Ton, J, Gralla, J.D, Kuriyan, J, Berger, J.M, Wemmer, D.E. | | 登録日 | 2012-06-27 | | 公開日 | 2012-08-29 | | 最終更新日 | 2023-09-13 | | 実験手法 | X-RAY DIFFRACTION (3.004 Å) | | 主引用文献 | DNA Recognition by a sigma (54) Transcriptional Activator from Aquifex aeolicus.
J.Mol.Biol., 426, 2014
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1DJM
 | | SOLUTION STRUCTURE OF BEF3-ACTIVATED CHEY FROM ESCHERICHIA COLI | | 分子名称: | CHEMOTAXIS PROTEIN Y | | 著者 | Cho, H.S, Lee, S.Y, Yan, D, Pan, X, Parkinson, J.S, Kustu, S, Wemmer, D.E, Pelton, J.G. | | 登録日 | 1999-12-03 | | 公開日 | 2000-04-05 | | 最終更新日 | 2022-02-16 | | 実験手法 | SOLUTION NMR | | 主引用文献 | NMR structure of activated CheY.
J.Mol.Biol., 297, 2000
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1FQW
 | | CRYSTAL STRUCTURE OF ACTIVATED CHEY | | 分子名称: | BERYLLIUM TRIFLUORIDE ION, CHEMOTAXIS CHEY PROTEIN, MANGANESE (II) ION | | 著者 | Lee, S.Y, Cho, H.S, Pelton, J.G, Yan, D, Berry, E.A, Wemmer, D.E. | | 登録日 | 2000-09-07 | | 公開日 | 2001-07-18 | | 最終更新日 | 2024-02-07 | | 実験手法 | X-RAY DIFFRACTION (2.37 Å) | | 主引用文献 | Crystal structure of activated CheY. Comparison with other activated receiver domains.
J.Biol.Chem., 276, 2001
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3B39
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3DZD
 | | Crystal structure of sigma54 activator NTRC4 in the inactive state | | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, SODIUM ION, Transcriptional regulator (NtrC family) | | 著者 | Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E. | | 登録日 | 2008-07-29 | | 公開日 | 2008-11-25 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation.
J.Mol.Biol., 384, 2008
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3E7L
 | | Crystal structure of sigma54 activator NtrC4's DNA binding domain | | 分子名称: | Transcriptional regulator (NtrC family), ZINC ION | | 著者 | Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E. | | 登録日 | 2008-08-18 | | 公開日 | 2008-11-25 | | 最終更新日 | 2024-02-21 | | 実験手法 | X-RAY DIFFRACTION (2.252 Å) | | 主引用文献 | Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation.
J.Mol.Biol., 384, 2008
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1PA4
 | | Solution structure of a putative ribosome-binding factor from Mycoplasma pneumoniae (MPN156) | | 分子名称: | Probable ribosome-binding factor A | | 著者 | Rubin, S.M, Pelton, J.G, Yokota, H, Kim, R, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC) | | 登録日 | 2003-05-13 | | 公開日 | 2004-03-02 | | 最終更新日 | 2022-02-23 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of a putative ribosome binding protein from Mycoplasma pneumoniae and comparison to a distant homolog.
J.STRUCT.FUNCT.GENOM., 4, 2003
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4L5E
 | | Crystal structure of A. aeolicus NtrC1 DNA binding domain | | 分子名称: | SULFATE ION, Transcriptional regulator (NtrC family) | | 著者 | Young, A, Maris, A.E, Vidangos, N.K, Hong, E, Pelton, J.G, Batchelor, J.D, Wemmer, D.E. | | 登録日 | 2013-06-10 | | 公開日 | 2013-08-28 | | 最終更新日 | 2024-02-28 | | 実験手法 | X-RAY DIFFRACTION (1.34 Å) | | 主引用文献 | Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators.
Biopolymers, 99, 2013
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4L9U
 | | Structure of C-terminal coiled coil of RasGRP1 | | 分子名称: | GLYCEROL, RAS guanyl-releasing protein 1, SULFATE ION | | 著者 | Iwig, J.S, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J.G, Wemmer, D.E, Roose, J.P, Kuriyan, J. | | 登録日 | 2013-06-18 | | 公開日 | 2013-08-21 | | 最終更新日 | 2024-02-28 | | 実験手法 | X-RAY DIFFRACTION (1.6014 Å) | | 主引用文献 | Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1.
Elife, 2, 2013
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4L9M
 | | Autoinhibited state of the Ras-specific exchange factor RasGRP1 | | 分子名称: | CITRIC ACID, GLYCEROL, RAS guanyl-releasing protein 1, ... | | 著者 | Iwig, J.S, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J.G, Wemmer, D.E, Roose, J.P, Kuriyan, J. | | 登録日 | 2013-06-18 | | 公開日 | 2013-08-21 | | 最終更新日 | 2023-09-20 | | 実験手法 | X-RAY DIFFRACTION (3 Å) | | 主引用文献 | Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1.
Elife, 2, 2013
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4L4U
 | | Crystal structure of construct containing A. aeolicus NtrC1 receiver, central and DNA binding domains | | 分子名称: | Transcriptional regulator (NtrC family) | | 著者 | Vidangos, N.K, Maris, A.E, Young, A, Hong, E, Pelton, J.G, Batchelor, J.D, Wemmer, D.E. | | 登録日 | 2013-06-09 | | 公開日 | 2013-08-28 | | 最終更新日 | 2013-10-23 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators.
Biopolymers, 99, 2013
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1ZIT
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2AHQ
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2M20
 | | EGFR transmembrane - juxtamembrane (TM-JM) segment in bicelles: MD guided NMR refined structure. | | 分子名称: | Epidermal growth factor receptor | | 著者 | Endres, N.F, Das, R, Smith, A, Arkhipov, A, Kovacs, E, Huang, Y, Pelton, J.G, Shan, Y, Shaw, D.E, Wemmer, D.E, Groves, J.T, Kuriyan, J. | | 登録日 | 2012-12-11 | | 公開日 | 2013-02-20 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Conformational Coupling across the Plasma Membrane in Activation of the EGF Receptor.
Cell(Cambridge,Mass.), 152, 2013
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2JMP
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2KIC
 | | n-NafY. N-terminal domain of NafY | | 分子名称: | Nitrogenase gamma subunit | | 著者 | Phillips, A.H, Hernandez, J.A, Erbil, K, Pelton, J.G, Wemmer, D.E, Rubio, L.M. | | 登録日 | 2009-05-01 | | 公開日 | 2010-12-08 | | 最終更新日 | 2011-07-13 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Biological activity and solution structure of the apo-dinitrogenase binding domain of NafY
J.Biol.Chem., 2010
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2MXD
 | | Solution structure of VPg of porcine sapovirus | | 分子名称: | Viral protein genome-linked | | 著者 | Kim, J, Hwang, H, Min, H, Yun, H, Cho, K, Pelton, J.G, Wemmer, D.E, Lee, C. | | 登録日 | 2014-12-24 | | 公開日 | 2015-04-15 | | 最終更新日 | 2023-06-14 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of the porcine sapovirus VPg core reveals a stable three-helical bundle with a conserved surface patch.
Biochem.Biophys.Res.Commun., 459, 2015
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2O8K
 | | NMR Structure of the Sigma-54 RpoN Domain Bound to the-24 Promoter Element | | 分子名称: | 5'-D(*GP*AP*AP*AP*CP*GP*TP*GP*CP*CP*AP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*GP*CP*AP*CP*GP*TP*TP*TP*C)-3', RNA polymerase sigma factor RpoN | | 著者 | Doucleff, M, Pelton, J.G, Lee, P.S, Wemmer, D.E. | | 登録日 | 2006-12-12 | | 公開日 | 2007-07-17 | | 最終更新日 | 2023-12-27 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structural basis of DNA recognition by the alternative sigma-factor, sigma54.
J.Mol.Biol., 369, 2007
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2O9L
 | | AMBER refined NMR Structure of the Sigma-54 RpoN Domain Bound to the-24 Promoter Element | | 分子名称: | 5'-D(*GP*AP*AP*AP*CP*GP*TP*GP*CP*CP*AP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*GP*CP*AP*CP*GP*TP*TP*TP*C)-3', RNA polymerase sigma factor RpoN | | 著者 | Doucleff, M, Pelton, J.G, Lee, P.S, Wemmer, D.E. | | 登録日 | 2006-12-13 | | 公開日 | 2007-07-17 | | 最終更新日 | 2023-12-27 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structural basis of DNA recognition by the alternative sigma-factor, sigma54.
J.Mol.Biol., 369, 2007
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6NIE
 | | BesD with Fe(II), chloride, and alpha-ketoglutarate | | 分子名称: | 2-OXOGLUTARIC ACID, BesD, lysine halogenase, ... | | 著者 | Neugebauer, M.E, Chang, M.C.Y. | | 登録日 | 2018-12-27 | | 公開日 | 2019-10-02 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | A family of radical halogenases for the engineering of amino-acid-based products.
Nat.Chem.Biol., 15, 2019
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7JSD
 | | Hydroxylase homolog of BesD with Fe(II), alpha-ketoglutarate, and lysine | | 分子名称: | 2-OXOGLUTARIC ACID, FE (II) ION, LYSINE, ... | | 著者 | Kissman, E.N, Neugebauer, M.E, Chang, M.C.Y. | | 登録日 | 2020-08-14 | | 公開日 | 2021-08-25 | | 最終更新日 | 2023-10-18 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Reaction pathway engineering converts a radical hydroxylase into a halogenase.
Nat.Chem.Biol., 18, 2022
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