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1TV6
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BU of 1tv6 by Molmil
HIV-1 Reverse Transcriptase Complexed with CP-94,707
分子名称: 3-[4-(2-METHYL-IMIDAZO[4,5-C]PYRIDIN-1-YL)BENZYL]-3H-BENZOTHIAZOL-2-ONE, reverse transcriptase p51 subunit, reverse transcriptase p66 subunit
著者Pata, J.D, Stirtan, W.G, Goldstein, S.W, Steitz, T.A.
登録日2004-06-28
公開日2004-07-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of HIV-1 reverse transcriptase bound to an inhibitor active against mutant RTs resistant to other non-nucleoside inhibitors
Proc.Natl.Acad.Sci.USA, 101, 2004
3BQ0
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BU of 3bq0 by Molmil
Pre-insertion binary complex of Dbh DNA polymerase
分子名称: CALCIUM ION, DNA (5'-D(*DGP*DAP*DAP*DGP*DCP*DCP*DGP*DGP*DCP*DG)-3'), DNA (5'-D(*DT*DTP*DCP*DCP*DGP*DCP*DCP*DCP*DGP*DGP*DCP*DTP*DTP*DCP*DC)-3'), ...
著者Pata, J.D, Wilson, R.C.
登録日2007-12-19
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural insights into the generation of single-base deletions by the Y family DNA polymerase dbh.
Mol.Cell, 29, 2008
3BQ1
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BU of 3bq1 by Molmil
Insertion ternary complex of Dbh DNA polymerase
分子名称: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*DGP*DAP*DAP*DGP*DCP*DCP*DGP*DGP*DCP*DG)-3'), ...
著者Pata, J.D, Wilson, R.C.
登録日2007-12-19
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insights into the generation of single-base deletions by the Y family DNA polymerase dbh.
Mol.Cell, 29, 2008
3BQ2
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BU of 3bq2 by Molmil
Post-insertion binary complex of Dbh DNA polymerase
分子名称: CALCIUM ION, DNA (5'-D(*DGP*DAP*DAP*DGP*DCP*DCP*DGP*DGP*DCP*DGP*DG)-3'), DNA (5'-D(*DTP*DTP*DCP*DCP*DGP*DCP*DCP*DCP*DGP*DGP*DCP*DTP*DTP*DCP*DC)-3'), ...
著者Pata, J.D, Wilson, R.C.
登録日2007-12-19
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insights into the generation of single-base deletions by the Y family DNA polymerase dbh.
Mol.Cell, 29, 2008
3QZ8
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BU of 3qz8 by Molmil
TT-4 ternary complex of Dpo4
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*AP*GP*G)-3', 5'-D(*TP*TP*AP*CP*GP*CP*CP*TP*TP*GP*AP*TP*CP*AP*GP*TP*GP*CP*C)-3', ...
著者Pata, J.D, Wu, Y, Wilson, R.C.
登録日2011-03-04
公開日2011-04-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献The y-family DNA polymerase dpo4 uses a template slippage mechanism to create single-base deletions.
J.Bacteriol., 193, 2011
3QZ7
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BU of 3qz7 by Molmil
T-3 ternary complex of Dpo4
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*GP*GP*G)-3', 5'-D(*TP*TP*AP*CP*GP*CP*CP*TP*CP*GP*AP*TP*CP*AP*GP*TP*GP*CP*C)-3', ...
著者Pata, J.D, Wu, Y, Wilson, R.C.
登録日2011-03-04
公開日2011-04-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献The y-family DNA polymerase dpo4 uses a template slippage mechanism to create single-base deletions.
J.Bacteriol., 193, 2011
4F4W
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BU of 4f4w by Molmil
Y-family DNA polymerase chimera Dbh-Dpo4-Dpo4 #1
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*GP*GP*C)-3'), ...
著者Pata, J.D, Wilson, R.C.
登録日2012-05-11
公開日2013-01-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Y-family polymerase conformation is a major determinant of fidelity and translesion specificity.
Structure, 21, 2013
4F4X
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BU of 4f4x by Molmil
Y-family DNA polymerase chimera Dbh-Dpo4-Dpo4 #2
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*GP*GP*GP*C)-3'), ...
著者Pata, J.D, Wilson, R.C.
登録日2012-05-11
公開日2013-01-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.049 Å)
主引用文献Y-family polymerase conformation is a major determinant of fidelity and translesion specificity.
Structure, 21, 2013
4F4Y
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BU of 4f4y by Molmil
Y-family DNA polymerase chimera Dbh-Dpo4-Dbh
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*GP*GP*GP*CP*CP*C)-3'), ...
著者Pata, J.D, Wilson, R.C.
登録日2012-05-11
公開日2013-01-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.338 Å)
主引用文献Y-family polymerase conformation is a major determinant of fidelity and translesion specificity.
Structure, 21, 2013
4F4Z
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BU of 4f4z by Molmil
Y-family DNA polymerase chimera Dpo4-Dpo4-Dbh
分子名称: CALCIUM ION, DNA (5'-D(*AP*GP*GP*GP*GP*GP*AP*AP*GP*CP*CP*G)-3'), DNA (5'-D(*TP*TP*CP*CP*GP*CP*CP*CP*GP*GP*CP*TP*TP*CP*CP*CP*CP*CP*T)-3'), ...
著者Pata, J.D, Wilson, R.C.
登録日2012-05-11
公開日2013-01-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.305 Å)
主引用文献Y-family polymerase conformation is a major determinant of fidelity and translesion specificity.
Structure, 21, 2013
4F50
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BU of 4f50 by Molmil
Y-family DNA polymerase chimera Dbh-Dbh-Dpo4
分子名称: CALCIUM ION, DNA (5'-D(*CP*CP*GP*CP*CP*T*GP*GP*CP*TP*TP*CP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*AP*AP*GP*CP*CP*GP*GP*C)-3'), ...
著者Pata, J.D, Wilson, R.C.
登録日2012-05-11
公開日2013-01-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.215 Å)
主引用文献Y-family polymerase conformation is a major determinant of fidelity and translesion specificity.
Structure, 21, 2013
1IM4
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BU of 1im4 by Molmil
Crystal Structure of a DinB Homolog (DBH) Lesion Bypass DNA Polymerase Catalytic Fragment from Sulfolobus solfataricus
分子名称: DBH, SULFATE ION
著者Pata, J.D, Zhou, B.L, Steitz, T.A.
登録日2001-05-09
公開日2001-09-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a DinB lesion bypass DNA polymerase catalytic fragment reveals a classic polymerase catalytic domain.
Mol.Cell, 8, 2001
4HYK
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BU of 4hyk by Molmil
Dbh Ternary Complex (substrates partially disordered)
分子名称: DNA (5'-D(*GP*GP*GP*AP*AP*GP*CP*CP*GP*G)-3'), DNA (5'-D(*TP*TP*CP*CP*GP*CP*CP*CP*CP*GP*GP*CP*TP*TP*CP*CP*C)-3'), DNA polymerase IV
著者Pata, J.D, Wilson, R.C.
登録日2012-11-13
公開日2013-01-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.802 Å)
主引用文献Y-family polymerase conformation is a major determinant of fidelity and translesion specificity.
Structure, 21, 2013
4NLG
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BU of 4nlg by Molmil
Y-family DNA polymerase chimera Dbh-Dpo4(243-245)-Dbh
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*GP*GP*G)-3', 5'-D(*TP*TP*AP*CP*GP*CP*CP*CP*TP*GP*AP*TP*CP*AP*GP*TP*GP*CP*C)-3', ...
著者Mukherjee, P, Wilson, R.C, Pata, J.D.
登録日2013-11-14
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Three Residues of the Interdomain Linker Determine the Conformation and Single-base Deletion Fidelity of Y-family Translesion Polymerases.
J.Biol.Chem., 289, 2014
5W5A
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BU of 5w5a by Molmil
Crystal structure of Mycobacterium tuberculosis CRP-FNR family transcription factor Cmr (Rv1675c)
分子名称: CHLORIDE ION, HTH-type transcriptional regulator Cmr, SULFATE ION
著者Cheung, J, Cassidy, M, Ginter, C, Ranganathan, S, Pata, D.J, McDonough, K.A.
登録日2017-06-14
公開日2017-12-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Novel structural features drive DNA binding properties of Cmr, a CRP family protein in TB complex mycobacteria.
Nucleic Acids Res., 46, 2018
5W5B
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BU of 5w5b by Molmil
Crystal structure of Mycobacterium tuberculosis CRP-FNR family transcription factor Cmr (Rv1675c), truncated construct
分子名称: CHLORIDE ION, HTH-type transcriptional regulator Cmr
著者Cheung, J, Cassidy, M, Ginter, C, Ranganathan, S, Pata, D.J, McDonough, K.A.
登録日2017-06-14
公開日2017-12-13
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Novel structural features drive DNA binding properties of Cmr, a CRP family protein in TB complex mycobacteria.
Nucleic Acids Res., 46, 2018
3F2D
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BU of 3f2d by Molmil
DNA Polymerase PolC from Geobacillus kaustophilus complex with DNA, dGTP, Mn and Zn
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*DAP*DTP*DAP*DAP*DCP*DGP*DGP*DTP*DTP*DGP*DCP*DCP*DCP*DGP*DTP*DCP*DTP*DCP*DAP*DCP*DTP*DG)-3', 5'-D(*DCP*DAP*DGP*DTP*DGP*DAP*DGP*DAP*DCP*DGP*DGP*DGP*DCP*DAP*DAP*DCP*DC)-3', ...
著者Davies, D.R, Evans, R.J, Bullard, J.M, Christensen, J, Green, L.S, Guiles, J.W, Ribble, W.K, Janjic, N, Jarvis, T.C.
登録日2008-10-29
公開日2009-01-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structure of PolC reveals unique DNA binding and fidelity determinants.
Proc.Natl.Acad.Sci.USA, 105, 2008
3F2C
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BU of 3f2c by Molmil
DNA Polymerase PolC from Geobacillus kaustophilus complex with DNA, dGTP and Mn
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*DAP*DTP*DAP*DAP*DCP*DGP*DGP*DTP*DTP*DGP*DCP*DCP*DCP*DGP*DTP*DCP*DTP*DCP*DAP*DCP*DTP*DG)-3', 5'-D(*DCP*DAP*DGP*DTP*DGP*DAP*DGP*DAP*DCP*DGP*DGP*DGP*DCP*DAP*DAP*DCP*DC)-3', ...
著者Davies, D.R, Evans, R.J, Bullard, J.M, Christensen, J, Green, L.S, Guiles, J.W, Ribble, W.K, Janjic, N, Jarvis, T.C.
登録日2008-10-29
公開日2009-01-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of PolC reveals unique DNA binding and fidelity determinants.
Proc.Natl.Acad.Sci.USA, 105, 2008
3F2B
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BU of 3f2b by Molmil
DNA Polymerase PolC from Geobacillus kaustophilus complex with DNA, dGTP, Mg and Zn
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*DAP*DTP*DAP*DAP*DCP*DGP*DGP*DTP*DTP*DGP*DCP*DCP*DCP*DGP*DTP*DCP*DTP*DCP*DAP*DCP*DTP*DG)-3', 5'-D(*DCP*DAP*DGP*DTP*DGP*DAP*DGP*DAP*DCP*DGP*DGP*DGP*DCP*DAP*DAP*DCP*DC)-3', ...
著者Davies, D.R, Evans, R.J, Bullard, J.M, Christensen, J, Green, L.S, Guiles, J.W, Ribble, W.K, Janjic, N, Jarvis, T.C.
登録日2008-10-29
公開日2009-01-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structure of PolC reveals unique DNA binding and fidelity determinants.
Proc.Natl.Acad.Sci.USA, 105, 2008

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