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3MOO
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BU of 3moo by Molmil
Crystal structure of the HmuO, heme oxygenase from Corynebacterium diphtheriae, in complex with azide-bound verdoheme
Descriptor: 5-OXA-PROTOPORPHYRIN IX CONTAINING FE, AZIDE ION, Heme oxygenase, ...
Authors:Omori, K, Matsui, T, Unno, M, Ikeda-Saito, M.
Deposit date:2010-04-22
Release date:2011-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Enzymatic ring-opening mechanism of verdoheme by the heme oxygenase: a combined X-ray crystallography and QM/MM study.
J.Am.Chem.Soc., 132, 2010
2YY2
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BU of 2yy2 by Molmil
Crystal structure of the human Phosphodiesterase 9A catalytic domain complexed with IBMX
Descriptor: 3-ISOBUTYL-1-METHYLXANTHINE, High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
Authors:Handa, N, Shirouzu, M, Terada, T, Omori, K, Kotera, J, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-27
Release date:2007-10-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the human Phosphodiesterase 9A catalytic domain
To be Published
2ZMF
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BU of 2zmf by Molmil
Crystal structure of the C-terminal GAF domain of human phosphodiesterase 10A
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A
Authors:Handa, N, Kishishita, S, Mizohata, E, Omori, K, Kotera, J, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-17
Release date:2008-04-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the GAF-B Domain from Human Phosphodiesterase 10A Complexed with Its Ligand, cAMP
J.Biol.Chem., 283, 2008
1IPI
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BU of 1ipi by Molmil
CRYSTAL STRUCTURE OF THE ARCHAEAL HOLLIDAY JUNCTION RESOLVASE HJC FROM PYROCOCCUS FURIOSUS FORM II
Descriptor: HOLLIDAY JUNCTION RESOLVASE
Authors:Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
Deposit date:2001-05-15
Release date:2001-11-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Dissection of the regional roles of the archaeal Holliday junction resolvase Hjc by structural and mutational analyses.
J.Biol.Chem., 276, 2001
1J25
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BU of 1j25 by Molmil
Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, Mn cocrystal
Descriptor: ATP-dependent RNA helicase, putative, MANGANESE (II) ION
Authors:Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
Deposit date:2002-12-25
Release date:2003-04-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1GEF
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BU of 1gef by Molmil
Crystal structure of the archaeal holliday junction resolvase HJC
Descriptor: HOLLIDAY JUNCTION RESOLVASE, SULFATE ION
Authors:Nishino, T, Komori, K, Tsuchiya, D, Ishino, Y, Morikawa, K.
Deposit date:2000-11-08
Release date:2001-03-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the archaeal holliday junction resolvase Hjc and implications for DNA recognition.
Structure, 9, 2001
1J23
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BU of 1j23 by Molmil
Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain
Descriptor: ATP-dependent RNA helicase, putative
Authors:Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
Deposit date:2002-12-25
Release date:2003-04-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1J22
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BU of 1j22 by Molmil
Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, selenomet derivative
Descriptor: ATP-dependent RNA helicase, putative
Authors:Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
Deposit date:2002-12-25
Release date:2003-04-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1J24
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BU of 1j24 by Molmil
Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, Ca cocrystal
Descriptor: ATP-dependent RNA helicase, putative, CALCIUM ION
Authors:Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
Deposit date:2002-12-25
Release date:2003-04-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1WP9
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BU of 1wp9 by Molmil
Crystal structure of Pyrococcus furiosus Hef helicase domain
Descriptor: ATP-dependent RNA helicase, putative, PHOSPHATE ION
Authors:Nishino, T, Komori, K, Tsuchiya, D, Ishino, Y, Morikawa, K.
Deposit date:2004-08-31
Release date:2005-02-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure and Functional Implications of Pyrococcus furiosus Hef Helicase Domain Involved in Branched DNA Processing
Structure, 13, 2005
1X2I
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BU of 1x2i by Molmil
Crystal Structure Of Archaeal Xpf/Mus81 Homolog, Hef From Pyrococcus Furiosus, Helix-hairpin-helix Domain
Descriptor: Hef helicase/nuclease
Authors:Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
Deposit date:2005-04-24
Release date:2005-09-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural and Functional Analyses of an Archaeal XPF/Rad1/Mus81 Nuclease: Asymmetric DNA Binding and Cleavage Mechanisms
STRUCTURE, 13, 2005
1N5X
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BU of 1n5x by Molmil
Xanthine Dehydrogenase from Bovine Milk with Inhibitor TEI-6720 Bound
Descriptor: 2-(3-CYANO-4-ISOBUTOXY-PHENYL)-4-METHYL-5-THIAZOLE-CARBOXYLIC ACID, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Okamoto, K, Eger, B.T, Nishino, T, Kondo, S, Pai, E.F, Nishino, T.
Deposit date:2002-11-07
Release date:2003-03-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:An Extremely Potent Inhibitor of Xanthine Oxidoreductase: Crystal Structure of the Enzyme-Inhibitor Complex and Mechanism of Inhibition
J.BIOL.CHEM., 278, 2003
1DQ3
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BU of 1dq3 by Molmil
CRYSTAL STRUCTURE OF AN ARCHAEAL INTEIN-ENCODED HOMING ENDONUCLEASE PI-PFUI
Descriptor: ENDONUCLEASE, ZINC ION
Authors:Ichiyanagi, K, Ishino, Y, Morikawa, K.
Deposit date:1999-12-30
Release date:2000-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of an archaeal intein-encoded homing endonuclease PI-PfuI.
J.Mol.Biol., 300, 2000
2V6L
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BU of 2v6l by Molmil
Molecular Model of a Type III Secretion System Needle
Descriptor: MXIH
Authors:Deane, J.E, Roversi, P, Cordes, F.S, Johnson, S, Kenjale, R, Daniell, S, Booy, F, Picking, W.L, Picking, W.D, Blocker, A.J, Lea, S.M.
Deposit date:2007-07-19
Release date:2007-07-31
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Molecular model of a type III secretion system needle: Implications for host-cell sensing.
Proc. Natl. Acad. Sci. U.S.A., 103, 2006

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