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3CRO
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BU of 3cro by Molmil
THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
分子名称: DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*AP*AP*CP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*GP*TP*TP*TP*GP*T P*AP*CP*T)-3'), PROTEIN (434 CRO)
著者Mondragon, A, Harrison, S.C.
登録日1990-07-06
公開日1991-10-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The phage 434 Cro/OR1 complex at 2.5 A resolution.
J.Mol.Biol., 219, 1991
2CRO
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BU of 2cro by Molmil
STRUCTURE OF PHAGE 434 CRO PROTEIN AT 2.35 ANGSTROMS RESOLUTION
分子名称: REGULATORY PROTEIN CRO
著者Mondragon, A, Wolberger, C, Harrison, S.C.
登録日1988-12-08
公開日1989-10-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of phage 434 Cro protein at 2.35 A resolution.
J.Mol.Biol., 205, 1989
1D6M
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BU of 1d6m by Molmil
CRYSTAL STRUCTURE OF E. COLI DNA TOPOISOMERASE III
分子名称: DNA TOPOISOMERASE III
著者Mondragon, A, DiGate, R.
登録日1999-10-14
公開日2000-10-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of Escherichia coli DNA topoisomerase III.
Structure Fold.Des., 7, 1999
1R69
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BU of 1r69 by Molmil
STRUCTURE OF THE AMINO-TERMINAL DOMAIN OF PHAGE 434 REPRESSOR AT 2.0 ANGSTROMS RESOLUTION
分子名称: REPRESSOR PROTEIN CI
著者Mondragon, A, Subbiah, S, Alamo, S.C, Drottar, M, Harrison, S.C.
登録日1988-12-08
公開日1989-10-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the amino-terminal domain of phage 434 repressor at 2.0 A resolution.
J.Mol.Biol., 205, 1989
5HM5
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BU of 5hm5 by Molmil
Crystal structure of Topo-97, an N-terminal 97kDa fragment of topoisomerase V
分子名称: Topoisomerase V
著者Rajan, R, Osterman, A, Mondragon, A.
登録日2016-01-15
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Methanopyrus kandleri topoisomerase V contains three distinct AP lyase active sites in addition to the topoisomerase active site.
Nucleic Acids Res., 44, 2016
4WLW
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BU of 4wlw by Molmil
CRYSTAL STRUCTURE OF THE AG(I) (ACTIVATOR) FORM OF E. COLI CUER, A COPPER EFFLUX REGULATOR, BOUND TO COPA PROMOTER DNA
分子名称: DNA NON-TEMPLATE STRAND (5-D(*DGP*DAP*DCP*DCP *DTP*DTP*DCP*DCP*DCP*DCP*DTP*DTP*DGP*DCP*DTP*DGP*DGP*DAP *DAP*DGP*DGP*DTP*DC)-3, DNA TEMPLATE STRAND (5-D(*DGP*DAP*DCP*DCP*DTP *DTP*DCP*DCP*DAP*DGP*DCP*DAP*DAP*DGP*DGP*DGP*DGP*DAP*DAP *DGP*DGP*DTP*DC)-3, HTH-type transcriptional regulator CueR, ...
著者Philips, S.J, Canalizo-Hernandez, M, Mondragon, A, O'Halloran, T.V.
登録日2014-10-08
公開日2015-09-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献TRANSCRIPTION. Allosteric transcriptional regulation via changes in the overall topology of the core promoter.
Science, 349, 2015
4WLS
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Crystal structure of the metal-free (repressor) form of E. Coli CUER, a copper efflux regulator, bound to COPA promoter DNA
分子名称: COPA PROMOTER DNA NON-TEMPLATE STRAND, COPA PROMOTER DNA NON-TEMPLATE STRAND (ALTERNATE CONFORMATION), COPA PROMOTER DNA TEMPLATE STRAND, ...
著者Philips, S.J, Canalizo-Hernandez, M, Mondragon, A, O'Halloran, T.V.
登録日2014-10-08
公開日2015-09-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.105 Å)
主引用文献Allosteric transcriptional regulation via changes in the overall topology of the core promoter.
Science, 349, 2015
8DF7
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Structure of M. kandleri topoisomerase V in complex with DNA. 38 base pair symmetric DNA complex
分子名称: DNA (39-MER), POTASSIUM ION, Topoisomerase V
著者Osterman, A, Mondragon, A.
登録日2022-06-21
公開日2022-08-31
実験手法X-RAY DIFFRACTION (3.52 Å)
主引用文献Structures of topoisomerase V in complex with DNA reveal unusual DNA binding mode and novel relaxation mechanism.
Elife, 11, 2022
8DFB
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Structure of M. kandleri topoisomerase V in complex with DNA. 39 base pair symmetric DNA complex
分子名称: DNA (40-MER), POTASSIUM ION, Topoisomerase V
著者Osterman, A, Mondragon, A.
登録日2022-06-21
公開日2022-08-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献Structures of topoisomerase V in complex with DNA reveal unusual DNA binding mode and novel relaxation mechanism.
Elife, 11, 2022
8DF9
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BU of 8df9 by Molmil
Structure of M. kandleri topoisomerase V in complex with DNA. 38 base pair asymmetric DNA complex
分子名称: DNA (33-MER), DNA (5'-D(P*GP*CP*CP*TP*GP*CP*AP*CP*GP*AP*AP*GP*TP*AP*AP*GP*C)-3'), DNA (5'-D(P*GP*CP*CP*TP*GP*CP*AP*CP*GP*AP*AP*GP*TP*AP*AP*GP*CP*A)-3'), ...
著者Osterman, A, Mondragon, A.
登録日2022-06-21
公開日2022-08-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Structures of topoisomerase V in complex with DNA reveal unusual DNA binding mode and novel relaxation mechanism.
Elife, 11, 2022
8DF8
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BU of 8df8 by Molmil
Structure of M. kandleri topoisomerase V in complex with DNA. 40 base pair symmetric DNA complex
分子名称: DNA (42-MER), PHOSPHATE ION, PHOSPHITE ION, ...
著者Osterman, A, Mondragon, A.
登録日2022-06-21
公開日2022-08-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Structures of topoisomerase V in complex with DNA reveal unusual DNA binding mode and novel relaxation mechanism.
Elife, 11, 2022
2F4Q
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BU of 2f4q by Molmil
Crystal Structure of Deinococcus radiodurans topoisomerase IB
分子名称: type I topoisomerase, putative
著者Patel, A, Shuman, S, Mondragon, A.
登録日2005-11-23
公開日2005-12-27
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of a bacterial type IB DNA topoisomerase reveals a preassembled active site in the absence of DNA.
J.Biol.Chem., 281, 2006
4ZQA
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BU of 4zqa by Molmil
Crystal Structure of the Sds3 Dimerization Domain
分子名称: Sin3 histone deacetylase corepressor complex component SDS3
著者Chan, C.W, Mondragon, A, Clark, M, Radhakrishnan, I.
登録日2015-05-08
公開日2015-07-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural insights into the assembly of the histone deacetylase-associated Sin3L/Rpd3L corepressor complex.
Proc.Natl.Acad.Sci.USA, 112, 2015
7LJP
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BU of 7ljp by Molmil
Structure of Thermotoga maritima SmpB
分子名称: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, SULFATE ION, ...
著者Chan, C.W, Mondragon, A.
登録日2021-01-29
公開日2022-02-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of Thermotoga maritima SmpB reveals its C-terminal tail domain in a helical conformation mimicking that of a ribosome-bound state
To Be Published
6N1Q
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BU of 6n1q by Molmil
Dihedral oligomeric complex of GyrA N-terminal fragment, solved by cryoEM in D2 symmetry
分子名称: DNA gyrase subunit A
著者Soczek, K.M, Grant, T, Rosenthal, P.B, Mondragon, A.
登録日2018-11-10
公開日2018-12-05
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (5.16 Å)
主引用文献CryoEM structures of open dimers of Gyrase A in complex with DNA illuminate mechanism of strand passage.
Elife, 7, 2018
6NBU
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BU of 6nbu by Molmil
CRISPR Complex Subunit Csm2 from Staphylococcus epidermidis RP62a
分子名称: CRISPR-associated protein
著者Dorsey, B.W, Huang, L, Mondragon, A.
登録日2018-12-10
公開日2019-02-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural organization of a Type III-A CRISPR effector subcomplex determined by X-ray crystallography and cryo-EM.
Nucleic Acids Res., 47, 2019
6NBT
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CRISPR Complex Subunit Csm3 from Staphylococcus epidermidis RP62a
分子名称: CALCIUM ION, CRISPR-associated protein, SAMARIUM (III) ION
著者Dorsey, B.W, Mondragon, A.
登録日2018-12-10
公開日2019-02-13
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural organization of a Type III-A CRISPR effector subcomplex determined by X-ray crystallography and cryo-EM.
Nucleic Acids Res., 47, 2019
4MTE
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BU of 4mte by Molmil
Zinc Uptake Regulator Complexed with Zinc and DNA
分子名称: ZINC ION, Zinc uptake regulation protein, znuABC operator DNA
著者Gilston, B.A, Mondragon, A, O'Halloran, T.V.
登録日2013-09-19
公開日2014-11-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Mechanistic Basis of Zinc Regulation Across the E. coli Zur Regulon.
Plos Biol., 12, 2014
1I9S
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BU of 1i9s by Molmil
CRYSTAL STRUCTURE OF THE RNA TRIPHOSPHATASE DOMAIN OF MOUSE MRNA CAPPING ENZYME
分子名称: CACODYLATE ION, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
著者Changela, A, Ho, C.K, Martins, A, Shuman, S, Mondragon, A.
登録日2001-03-20
公開日2001-05-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure and mechanism of the RNA triphosphatase component of mammalian mRNA capping enzyme.
EMBO J., 20, 2001
1I9T
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BU of 1i9t by Molmil
CRYSTAL STRUCTURE OF THE OXIDIZED RNA TRIPHOSPHATASE DOMAIN OF MOUSE MRNA CAPPING ENZYME
分子名称: CACODYLATE ION, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
著者Changela, A, Ho, C.K, Martins, A, Shuman, S, Mondragon, A.
登録日2001-03-20
公開日2001-05-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and mechanism of the RNA triphosphatase component of mammalian mRNA capping enzyme.
EMBO J., 20, 2001
7UZX
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BU of 7uzx by Molmil
Staphylococcus epidermidis RP62a CRISPR effector subcomplex with non-self target RNA bound
分子名称: CRISPR non-self RNA target, CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm4, ...
著者Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
登録日2022-05-09
公開日2022-07-06
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7V00
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Staphylococcus epidermidis RP62a CRISPR tall effector complex with bound ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, ...
著者Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
登録日2022-05-09
公開日2022-07-06
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (3.87 Å)
主引用文献Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7UZZ
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Staphylococcus epidermidis RP62a CRISPR tall effector complex
分子名称: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
著者Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
登録日2022-05-09
公開日2022-07-06
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (4.45 Å)
主引用文献Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7UZY
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Staphylococcus epidermidis RP62A CRISPR effector complex with non-self target RNA 2
分子名称: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
著者Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
登録日2022-05-09
公開日2022-07-06
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (4.05 Å)
主引用文献Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7V02
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Staphylococcus epidermidis RP62A CRISPR short effector complex
分子名称: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
著者Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
登録日2022-05-09
公開日2022-07-06
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (4.97 Å)
主引用文献Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022

 

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