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2ZKL
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BU of 2zkl by Molmil
Crystal Structure of capsular polysaccharide assembling protein CapF from staphylococcus aureus
分子名称: Capsular polysaccharide synthesis enzyme Cap5F, GLYCEROL, ZINC ION
著者Miyafusa, T, Tanaka, Y, Yao, M, Tanaka, I, Tsumoto, K.
登録日2008-03-25
公開日2009-03-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Crystal structure of capsular polysaccharide assembling protein from Staphylococcus aureus
to be published
5GW9
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BU of 5gw9 by Molmil
Crystal structure of C163, a backbone circularized G-CSF
分子名称: Granulocyte colony-stimulating factor
著者Miyafusa, T, Honda, S.
登録日2016-09-09
公開日2017-09-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural insights into the backbone-circularized granulocyte colony-stimulating factor containing a short connector.
Biochem. Biophys. Res. Commun., 500, 2018
4G5H
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BU of 4g5h by Molmil
Crystal structure of capsular polysaccharide synthesizing enzyme CapE from Staphylococcus aureus in complex with by-product
分子名称: Capsular polysaccharide synthesis enzyme Cap8E, FORMIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Miyafusa, T, Caaveiro, J.M.M, Tanaka, Y, Tsumoto, K.
登録日2012-07-18
公開日2013-08-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Dynamic elements govern the catalytic activity of CapE, a capsular polysaccharide-synthesizing enzyme from Staphylococcus aureus.
Febs Lett., 587, 2013
3VHR
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BU of 3vhr by Molmil
Crystal Structure of capsular polysaccharide assembling protein CapF from Staphylococcus aureus in space group C2221
分子名称: Capsular polysaccharide synthesis enzyme Cap5F, FORMIC ACID, ZINC ION
著者Miyafusa, T, Yoshikazu, T, Caaveiro, J.M.M, Tsumoto, K.
登録日2011-09-01
公開日2012-02-15
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the enzyme CapF of Staphylococcus aureus reveals a unique architecture composed of two functional domains.
Biochem.J., 443, 2012
3ST7
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BU of 3st7 by Molmil
Crystal Structure of capsular polysaccharide assembling protein CapF from staphylococcus aureus
分子名称: Capsular polysaccharide synthesis enzyme Cap5F, GLYCEROL, ZINC ION
著者Miyafusa, T, Tanaka, Y, Kuroda, M, Yao, M, Watanabe, M, Ohta, T, Tanaka, I, Caaveiro, J.M.M, Tsumoto, K.
登録日2011-07-09
公開日2012-02-15
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of the enzyme CapF of Staphylococcus aureus reveals a unique architecture composed of two functional domains.
Biochem.J., 443, 2012
3VVB
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BU of 3vvb by Molmil
Crystal Structure of Capsular Polysaccharide Synthesizing Enzyme CapE from Staphylococcus aureus in apo form
分子名称: CapE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Miyafusa, T, Caaveiro, J.M, Tanaka, Y, Tsumoto, K.
登録日2012-07-18
公開日2013-06-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the capsular polysaccharide synthesizing protein CapE of Staphylococcus aureus.
Biosci.Rep., 33, 2013
3VVC
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BU of 3vvc by Molmil
Crystal Structure of Capsular Polysaccharide Synthesizing Enzyme CapE , K126E, in apo form
分子名称: Capsular polysaccharide synthesis enzyme Cap8E, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
著者Miyafusa, T, Caaveiro, J.M, Tanaka, Y, Tsumoto, K.
登録日2012-07-18
公開日2013-06-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the capsular polysaccharide synthesizing protein CapE of Staphylococcus aureus.
Biosci.Rep., 33, 2013
3W1V
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BU of 3w1v by Molmil
Crystal Structure of Capsular Polysaccharide Synthesizing Enzyme CapE from Staphylococcus aureus in complex with inihibitor
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Capsular polysaccharide synthesis enzyme Cap8E, SODIUM ION, ...
著者Miyafusa, T, Caaveiro, J.M, Tanaka, Y, Tsumoto, K.
登録日2012-11-21
公開日2013-06-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the capsular polysaccharide synthesizing protein CapE of Staphylococcus aureus.
Biosci.Rep., 33, 2013
4YRD
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BU of 4yrd by Molmil
Crystal structure of CapF with inhibitor 3-isopropenyl-tropolone
分子名称: 2-hydroxy-3-(prop-1-en-2-yl)cyclohepta-2,4,6-trien-1-one, Capsular polysaccharide synthesis enzyme Cap5F, ZINC ION
著者Nakano, K, Chigira, T, Miyafusa, T, Nagatoishi, S, Caaveiro, J.M.M, Tsumoto, K.
登録日2015-03-15
公開日2015-10-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Discovery and characterization of natural tropolones as inhibitors of the antibacterial target CapF from Staphylococcus aureus.
Sci Rep, 5, 2015
5AZ2
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BU of 5az2 by Molmil
Crystal structure of the Fab fragment of 9E5, a murine monoclonal antibody specific for human epiregulin
分子名称: anti-human epiregulin antibody 9E5 Fab heavy chain, anti-human epiregulin antibody 9E5 Fab light chain
著者Kado, Y, Mizohata, E, Nagatoishi, S, Iijima, M, Shinoda, K, Miyafusa, T, Nakayama, T, Yoshizumi, T, Sugiyama, A, Kawamura, T, Lee, Y.H, Matsumura, H, Doi, H, Fujitani, H, Kodama, T, Shibasaki, Y, Tsumoto, K, Inoue, T.
登録日2015-09-16
公開日2015-12-09
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (1.603 Å)
主引用文献Epiregulin Recognition Mechanisms by Anti-epiregulin Antibody 9E5: STRUCTURAL, FUNCTIONAL, AND MOLECULAR DYNAMICS SIMULATION ANALYSES
J.Biol.Chem., 291, 2016
5E8D
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BU of 5e8d by Molmil
Crystal structure of human epiregulin in complex with the Fab fragment of murine monoclonal antibody 9E5
分子名称: CHLORIDE ION, GLYCEROL, Proepiregulin, ...
著者Kado, Y, Mizohata, E, Nagatoishi, S, Iijima, M, Shinoda, K, Miyafusa, T, Nakayama, T, Yoshizumi, T, Sugiyama, A, Kawamura, T, Lee, Y.H, Matsumura, H, Doi, H, Fujitani, H, Kodama, T, Shibasaki, Y, Tsumoto, K, Inoue, T.
登録日2015-10-14
公開日2015-12-09
最終更新日2020-02-19
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Epiregulin Recognition Mechanisms by Anti-epiregulin Antibody 9E5: STRUCTURAL, FUNCTIONAL, AND MOLECULAR DYNAMICS SIMULATION ANALYSES
J.Biol.Chem., 291, 2016
5ZO6
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BU of 5zo6 by Molmil
Crystal structure of C166, a backbone circularized G-CSF
分子名称: Granulocyte colony-stimulating factor
著者Shibuya, R, Miyafusa, T, Honda, S.
登録日2018-04-12
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Stabilization of backbone-circularized protein is attained by synergistic gains in enthalpy of folded structure and entropy of unfolded structure.
Febs J., 2019
5JYM
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BU of 5jym by Molmil
Human P-cadherin EC12 with scFv TSP11 bound
分子名称: Antibody scFv TSP11, CALCIUM ION, Cadherin-3
著者Caaveiro, J.M.M, Kudo, S, Tsumoto, K.
登録日2016-05-14
公開日2016-12-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Disruption of cell adhesion by an antibody targeting the cell-adhesive intermediate (X-dimer) of human P-cadherin
Sci Rep, 7, 2017
5JYL
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BU of 5jyl by Molmil
Human P-cadherin MEC1 with scFv TSP7 bound
分子名称: CHLORIDE ION, Cadherin-3, GLYCEROL, ...
著者Caaveiro, J.M.M, Kudo, S, Tsumoto, K.
登録日2016-05-14
公開日2016-12-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Disruption of cell adhesion by an antibody targeting the cell-adhesive intermediate (X-dimer) of human P-cadherin
Sci Rep, 7, 2017
3VTO
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BU of 3vto by Molmil
The crystal structure of the C-terminal domain of Mu phage central spike
分子名称: CALCIUM ION, CHLORIDE ION, FE (III) ION, ...
著者Harada, K, Yamashita, E, Nakagawa, A, Takeda, S.
登録日2012-06-01
公開日2013-02-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Crystal structure of the C-terminal domain of Mu phage central spike and functions of bound calcium ion
Biochim.Biophys.Acta, 1834, 2013
3VTN
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BU of 3vtn by Molmil
The crystal structure of the C-terminal domain of Mu phage central spike - Pt derivative for MAD
分子名称: FE (III) ION, PLATINUM (II) ION, Protein gp45
著者Harada, K, Yamashita, E, Nakagawa, A, Takeda, S.
登録日2012-06-01
公開日2013-02-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of the C-terminal domain of Mu phage central spike and functions of bound calcium ion
Biochim.Biophys.Acta, 1834, 2013

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