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1UGV
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BU of 1ugv by Molmil
Solution structure of the SH3 domain of human olygophrein-1 like protein (KIAA0621)
Descriptor: Olygophrenin-1 like protein
Authors:Inoue, K, Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nakayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-20
Release date:2003-12-20
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain of human olygophrein-1 like protein (KIAA0621)
To be Published
1UFZ
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BU of 1ufz by Molmil
Solution structure of HBS1-like domain in hypothetical protein BAB28515
Descriptor: Hypothetical protein BAB28515
Authors:He, F, Muto, Y, Hayami, N, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-11
Release date:2004-08-03
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of HBS1-like domain in hypothetical protein BAB28515
To be Published
1UG7
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BU of 1ug7 by Molmil
Solution structure of four helical up-and-down bundle domain of the hypothetical protein 2610208M17Rik similar to the protein FLJ12806
Descriptor: 2610208M17Rik protein
Authors:Li, H, Kigawa, T, Tomizawa, T, Koshiba, S, Inoue, M, Shirouzu, M, Terada, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-13
Release date:2004-08-17
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of four helical up-and-down bundle domain of the hypothetical protein 2610208M17Rik similar to the protein FLJ12806
To be Published
1UFX
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BU of 1ufx by Molmil
Solution structure of the third PDZ domain of human KIAA1526 protein
Descriptor: KIAA1526 protein
Authors:Tochio, N, Kobayashi, N, Koshiba, S, Kigawa, T, Inoue, M, Shirouzu, M, Terada, T, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nakayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-10
Release date:2003-12-10
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the third PDZ domain of human KIAA1526 protein
To be Published
1UG0
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BU of 1ug0 by Molmil
Solution structure of SURP domain in BAB30904
Descriptor: splicing factor 4
Authors:He, F, Muto, Y, Ushikoshi, R, Koshiba, S, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-11
Release date:2004-08-03
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of SURP domain in BAB30904
To be Published
1UG2
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BU of 1ug2 by Molmil
Solution Structure of Mouse Hypothetical Gene (2610100B20Rik) Product Homologous to Myb DNA-binding Domain
Descriptor: 2610100B20Rik gene product
Authors:Zhao, C, Kigawa, T, Tochio, N, Koshiba, S, Inoue, M, Shirouzu, M, Terada, T, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Tanaka, A, Osanai, T, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-11
Release date:2004-06-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of Mouse Hypothetical Gene (2610100B20Rik) Product Homologous to Myb DNA-binding Domain
To be Published
1UH6
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BU of 1uh6 by Molmil
Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06
Descriptor: ubiquitin-like 5
Authors:Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-25
Release date:2003-12-25
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06
To be Published
1UHR
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BU of 1uhr by Molmil
Solution structure of the SWIB domain of mouse BRG1-associated factor 60a
Descriptor: SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily D member 1
Authors:Yamada, K, Saito, K, Nameki, N, Inoue, M, Koshiba, S, Shirouzu, M, Terada, T, Yabuki, T, Aoki, M, Matsuda, T, Seki, E, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-09
Release date:2004-08-24
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the SWIB domain of mouse BRG1-associated factor 60a
To be Published
1UHW
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BU of 1uhw by Molmil
Solution structure of the DEP domain of mouse pleckstrin
Descriptor: Pleckstrin
Authors:Inoue, K, Yoshida, M, Hatta, R, Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Tanaka, A, Osanai, T, Matsuo, Y, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-11
Release date:2004-01-11
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the DEP domain of mouse pleckstrin
To be Published
1UHT
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BU of 1uht by Molmil
Solution Structure of The FHA Domain of Arabidopsis thaliana Hypothetical Protein
Descriptor: expressed protein
Authors:Tomizawa, T, Inoue, M, Koshiba, S, Hayashi, F, Shirouzu, M, Terada, T, Yabuki, T, Aoki, M, Matsuda, T, Seki, E, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Shinozaki, K, Seki, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-10
Release date:2004-01-10
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of The FHA Domain of Arabidopsis thaliana Hypothetical Protein
To be Published
1UHZ
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BU of 1uhz by Molmil
Solution structure of dsRNA binding domain in Staufen homolog 2
Descriptor: staufen (RNA binding protein) homolog 2
Authors:He, F, Muto, Y, Obayashi, N, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Koboyashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-14
Release date:2004-08-03
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of dsRNA binding domain in Staufen homolog 2
To be Published
1UIL
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BU of 1uil by Molmil
Double-stranded RNA-binding motif of Hypothetical protein BAB28848
Descriptor: Double-stranded RNA-binding motif
Authors:Nagata, T, Muto, Y, Hayashi, F, Hamana, H, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-17
Release date:2004-11-16
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure of Double-stranded RNA-binding motif of Hypothetical protein BAB28848
To be Published
1UJR
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BU of 1ujr by Molmil
Solution structure of WWE domain in BAB28015
Descriptor: hypothetical protein AK012080
Authors:He, F, Muto, Y, Hamana, H, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nagayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-11
Release date:2004-10-05
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of WWE domain in BAB28015
To be Published
1UJY
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BU of 1ujy by Molmil
Solution structure of SH3 domain in Rac/Cdc42 guanine nucleotide exchange factor(GEF) 6
Descriptor: Rho guanine nucleotide exchange factor 6
Authors:He, F, Muto, Y, Uda, H, Koshiba, S, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nagayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-12
Release date:2004-02-12
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of SH3 domain in Rac/Cdc42 guanine nucleotide exchange factor(GEF) 6
To be Published
5Y01
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BU of 5y01 by Molmil
Acid-tolerant monomeric GFP, Gamillus, non-fluorescence (OFF) state
Descriptor: Green fluorescent protein, PHOSPHATE ION
Authors:Nakashima, R, Sakurai, K, Shinoda, H, Matsuda, T, Nagai, T.
Deposit date:2017-07-14
Release date:2018-01-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Acid-Tolerant Monomeric GFP from Olindias formosa.
Cell Chem Biol, 25, 2018
5Y00
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BU of 5y00 by Molmil
Acid-tolerant monomeric GFP, Gamillus, fluorescence (ON) state
Descriptor: CHLORIDE ION, GLYCEROL, Green fluorescent protein, ...
Authors:Nakashima, R, Sakurai, K, Shinoda, H, Matsuda, T, Nagai, T.
Deposit date:2017-07-14
Release date:2018-01-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Acid-Tolerant Monomeric GFP from Olindias formosa.
Cell Chem Biol, 25, 2018
1WRB
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BU of 1wrb by Molmil
Crystal structure of the N-terminal RecA-like domain of DjVLGB, a pranarian Vasa-like RNA helicase
Descriptor: DjVLGB, SULFATE ION
Authors:Kurimoto, K, Muto, Y, Obayashi, N, Terada, T, Shirouzu, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Kigawa, T, Okumura, H, Tanaka, A, Shibata, N, Kashikawa, M, Agata, K, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-10-14
Release date:2005-04-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the N-terminal RecA-like domain of a DEAD-box RNA helicase, the Dugesia japonica vasa-like gene B protein
J.Struct.Biol., 150, 2005
3NK3
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BU of 3nk3 by Molmil
Crystal structure of full-length sperm receptor ZP3 at 2.6 A resolution
Descriptor: CITRATE ANION, Zona pellucida 3, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose
Authors:Monne, M, Jovine, L.
Deposit date:2010-06-18
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into Egg Coat Assembly and Egg-Sperm Interaction from the X-Ray Structure of Full-Length ZP3.
Cell(Cambridge,Mass.), 143, 2010
3NK4
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BU of 3nk4 by Molmil
Crystal structure of full-length sperm receptor ZP3 at 2.0 A resolution
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, CITRATE ANION, Zona pellucida 3
Authors:Monne, M, Jovine, L.
Deposit date:2010-06-18
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into Egg Coat Assembly and Egg-Sperm Interaction from the X-Ray Structure of Full-Length ZP3.
Cell(Cambridge,Mass.), 143, 2010
1N27
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BU of 1n27 by Molmil
Solution structure of the PWWP domain of mouse Hepatoma-derived growth factor, related protein 3
Descriptor: Hepatoma-derived growth factor, related protein 3
Authors:Nameki, N, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-10-22
Release date:2003-12-23
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of the PWWP domain of the hepatoma-derived growth factor family.
Protein Sci., 14, 2005
6GF6
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BU of 6gf6 by Molmil
Molecular basis of egg coat filament cross-linking: high-resolution structure of the partially deglycosylated ZP1 ZP-N1 domain homodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1
Authors:Nishimura, K, Jovine, L.
Deposit date:2018-04-29
Release date:2019-06-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
6GF7
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BU of 6gf7 by Molmil
Molecular basis of egg coat filament cross-linking: Zn-SAD structure of the partially deglycosylated ZP1 ZP-N1 domain homodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ZINC ION, Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1
Authors:Nishimura, K, Jovine, L.
Deposit date:2018-04-29
Release date:2019-06-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
6GF8
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BU of 6gf8 by Molmil
Molecular basis of egg coat filament cross-linking: structure of the glycosylated ZP1 ZP-N1 domain homodimer
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Nishimura, K, Jovine, L.
Deposit date:2018-04-29
Release date:2019-06-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
8RKI
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BU of 8rki by Molmil
Molecular basis of ZP3/ZP1 heteropolymerization: crystal structure of a native vertebrate egg coat filament fragment
Descriptor: Choriogenin H, YTTERBIUM (III) ION, Zona pellucida sperm-binding protein 3, ...
Authors:Wiseman, B, Zamora-Caballero, S, de Sanctis, D, Yasumasu, S, Jovine, L.
Deposit date:2023-12-25
Release date:2024-03-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:ZP2 cleavage blocks polyspermy by modulating the architecture of the egg coat.
Cell, 187, 2024
8BQU
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BU of 8bqu by Molmil
Molecular basis of ZP3/ZP1 heteropolymerization: crystal structure of a native vertebrate egg coat filament
Descriptor: Choriogenin H, Zona pellucida sperm-binding protein 3, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Bokhove, M, de Sanctis, D, Yasumasu, S, Jovine, L.
Deposit date:2022-11-21
Release date:2024-03-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:ZP2 cleavage blocks polyspermy by modulating the architecture of the egg coat.
Cell, 187, 2024

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