2YYB
| Crystal structure of TTHA1606 from Thermus thermophilus HB8 | Descriptor: | Hypothetical protein TTHA1606 | Authors: | Tomoike, F, Nakagwa, N, Ebihara, A, Yokoyama, S, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-04-28 | Release date: | 2008-05-06 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Crystal structure of the conserved hypothetical protein TTHA1606 from Thermus thermophilus HB8. Proteins, 76, 2009
|
|
2YVP
| Crystal structure of NDX2 in complex with MG2+ and ampcpr from thermus thermophilus HB8 | Descriptor: | MAGNESIUM ION, METHYLENE ADP-BETA-XYLOSE, MutT/nudix family protein | Authors: | Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-04-13 | Release date: | 2008-02-26 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.66 Å) | Cite: | Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8 J.Bacteriol., 190, 2008
|
|
2YVN
| Crystal structure of NDX2 from thermus thermophilus HB8 | Descriptor: | MutT/nudix family protein | Authors: | Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-04-13 | Release date: | 2008-02-26 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.84 Å) | Cite: | Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8 J.Bacteriol., 190, 2008
|
|
2YVM
| Crystal structure of NDX2 in complex with MG2+ from thermus thermophilus HB8 | Descriptor: | MAGNESIUM ION, MutT/nudix family protein | Authors: | Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-04-13 | Release date: | 2008-02-26 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8 J.Bacteriol., 190, 2008
|
|
2ZQE
| Crystal structure of the Smr domain of Thermus thermophilus MutS2 | Descriptor: | MutS2 protein | Authors: | Fukui, K, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S. | Deposit date: | 2008-08-08 | Release date: | 2008-09-30 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal structure of MutS2 endonuclease domain and the mechanism of homologous recombination suppression J.Biol.Chem., 283, 2008
|
|
2ZW2
| Crystal Structure of Formylglycinamide Ribonucleotide Amidotransferase III from SULFOLOBUS TOKODAII (STPURS) | Descriptor: | GLYCEROL, Putative uncharacterized protein STS178 | Authors: | Suzuki, S, Tamura, S, Okada, K, Baba, S, Kumasaka, T, Nakagawa, N, Masui, R, Kuramitsu, S, Sampei, G, Kawai, G. | Deposit date: | 2008-11-27 | Release date: | 2009-11-17 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Crystal Structure of Formylglycinamide Ribonucleotide Amidotransferase III from SULFOLOBUS TOKODAII (STPURS) To be Published
|
|
3W8N
| |
2ZXO
| Crystal structure of RecJ from Thermus thermophilus HB8 | Descriptor: | Single-stranded DNA specific exonuclease RecJ | Authors: | Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S. | Deposit date: | 2009-01-05 | Release date: | 2010-01-05 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structure of RecJ exonuclease defines its specificity for single-stranded DNA J.Biol.Chem., 285, 2010
|
|
3W90
| |
3AAM
| Crystal structure of endonuclease IV from Thermus thermophilus HB8 | Descriptor: | Endonuclease IV, MANGANESE (II) ION, PHOSPHATE ION | Authors: | Asano, R, Ishikawa, H, Nakane, S, Baba, S, Nakagawa, N, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2009-11-20 | Release date: | 2010-12-01 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.58 Å) | Cite: | An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA Acta Crystallogr.,Sect.D, 67, 2011
|
|
3AAL
| Crystal Structure of endonuclease IV from Geobacillus kaustophilus | Descriptor: | CACODYLATE ION, FE (III) ION, Probable endonuclease 4, ... | Authors: | Asano, R, Ishikawa, H, Nakane, S, Nakagawa, N, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2009-11-20 | Release date: | 2010-12-01 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA Acta Crystallogr.,Sect.D, 67, 2011
|
|
3AKD
| |
3AKC
| Crystal structure of CMP kinase in complex with CDP and ADP from Thermus thermophilus HB8 | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, CYTIDINE-5'-DIPHOSPHATE, Cytidylate kinase, ... | Authors: | Mega, R, Nakagawa, N, Kuramitsu, S, Masui, R. | Deposit date: | 2010-07-12 | Release date: | 2011-07-06 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | The crystal structure of the tertiary complex of CMP kinase with a phosphoryl group acceptor and a donor from Thermus thermophilus HB8 To be Published
|
|
3A0J
| Crystal structure of cold shock protein 1 from Thermus thermophilus HB8 | Descriptor: | Cold shock protein | Authors: | Miyazaki, T, Nakagawa, N, Kuramitsu, S, Masui, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2009-03-19 | Release date: | 2010-03-23 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | The Biological Action of Cold Shock Protein 1 from Thermus thermophilus HB8 To be Published
|
|
2D64
| Aspartate Aminotransferase Mutant MABC With Isovaleric Acid | Descriptor: | Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE | Authors: | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | Deposit date: | 2005-11-09 | Release date: | 2006-11-14 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues To be Published
|
|
2D61
| Aspartate Aminotransferase Mutant MA With Maleic Acid | Descriptor: | Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE | Authors: | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | Deposit date: | 2005-11-08 | Release date: | 2006-11-14 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.01 Å) | Cite: | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues To be Published
|
|
2D63
| Aspartate Aminotransferase Mutant MA With Isovaleric Acid | Descriptor: | Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE | Authors: | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | Deposit date: | 2005-11-09 | Release date: | 2006-11-14 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues To be Published
|
|
2D5Y
| Aspartate Aminotransferase Mutant MC With Isovaleric Acid | Descriptor: | Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE | Authors: | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | Deposit date: | 2005-11-08 | Release date: | 2006-11-14 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (1.98 Å) | Cite: | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues To be Published
|
|
2D7Y
| Aspartate Aminotransferase Mutant MA | Descriptor: | Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE | Authors: | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | Deposit date: | 2005-11-30 | Release date: | 2006-11-14 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.66 Å) | Cite: | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues To be Published
|
|
2D3Y
| Crystal structure of uracil-DNA glycosylase from Thermus Thermophilus HB8 | Descriptor: | 2'-DEOXYURIDINE-5'-MONOPHOSPHATE, ACETATE ION, IRON/SULFUR CLUSTER, ... | Authors: | Kosaka, H, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2005-10-04 | Release date: | 2006-10-17 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Crystal structure of family 5 uracil-DNA glycosylase bound to DNA. J.Mol.Biol., 373, 2007
|
|
2D7Z
| Aspartate Aminotransferase Mutant MAB Complexed with Maleic Acid | Descriptor: | Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE | Authors: | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | Deposit date: | 2005-11-30 | Release date: | 2006-11-14 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.65 Å) | Cite: | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues To be Published
|
|
2D66
| Aspartate Aminotransferase Mutant MAB | Descriptor: | Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION | Authors: | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | Deposit date: | 2005-11-09 | Release date: | 2006-11-14 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.18 Å) | Cite: | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues To be Published
|
|
2D65
| Aspartate Aminotransferase Mutant MABC | Descriptor: | Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION | Authors: | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | Deposit date: | 2005-11-09 | Release date: | 2006-11-14 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues To be Published
|
|
3W34
| Ternary complex of Thermus thermophilus HB8 uridine-cytidine kinase with substrates | Descriptor: | 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Uridine kinase | Authors: | Tomoike, F, Nakagawa, N, Masui, R, Kuramitsu, S. | Deposit date: | 2012-12-10 | Release date: | 2013-12-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.91 Å) | Cite: | Structural and Biochemical Studies on the Reaction Mechanism of Uridine-Cytidine Kinase Protein J., 34, 2015
|
|
3W5W
| Mn2+-GMP complex of nanoRNase (Nrn) from Bacteroides fragilis | Descriptor: | GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, Putative exopolyphosphatase-related protein | Authors: | Uemura, Y, Nakagawa, N, Wakamatsu, T, Montelione, G.T, Hunt, J.F, Masui, R, Kuramitsu, S. | Deposit date: | 2013-02-07 | Release date: | 2013-07-10 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.95 Å) | Cite: | Crystal structure of the ligand-binding form of nanoRNase from Bacteroides fragilis, a member of the DHH/DHHA1 phosphoesterase family of proteins. Febs Lett., 587, 2013
|
|