Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1B7D
DownloadVisualize
BU of 1b7d by Molmil
NEUROTOXIN (TS1) FROM BRAZILIAN SCORPION TITYUS SERRULATUS
Descriptor: PHOSPHATE ION, PROTEIN (NEUROTOXIN TS1)
Authors:Polikarpov, I, Sanches Jr, M.S, Marangoni, S, Toyama, M.H, Teplyakov, A.
Deposit date:1999-01-21
Release date:1999-07-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal structure of neurotoxin Ts1 from Tityus serrulatus provides insights into the specificity and toxicity of scorpion toxins.
J.Mol.Biol., 290, 1999
1BFD
DownloadVisualize
BU of 1bfd by Molmil
BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA
Descriptor: BENZOYLFORMATE DECARBOXYLASE, CALCIUM ION, MAGNESIUM ION, ...
Authors:Hasson, M.S, Muscate, A, Mcleish, M.J, Polovnikova, L.S, Gerlt, J.A, Kenyon, G.L, Petsko, G.A, Ringe, D.
Deposit date:1998-04-30
Release date:1998-06-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of benzoylformate decarboxylase at 1.6 A resolution: diversity of catalytic residues in thiamin diphosphate-dependent enzymes.
Biochemistry, 37, 1998
2C1S
DownloadVisualize
BU of 2c1s by Molmil
X-ray structure of biotin binding protein from chicken
Descriptor: BIOTIN BINDING PROTEIN A, BIOTIN-D-SULFOXIDE
Authors:Hytonen, V.P, Niskanen, E.A, Maatta, J.A.E, Huuskonen, J, Helttunen, K.J, Halling, K.K, Slotte, J.P, Nordlund, H.R, Rissanen, K, Johnson, M.S, Salminen, T.A, Kulomaa, M.S, Laitinen, O.H, Airenne, T.T.
Deposit date:2005-09-19
Release date:2007-02-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure and Characterization of a Novel Chicken Biotin-Binding Protein a (Bbp-A).
Bmc Struct.Biol., 7, 2007
2C1Q
DownloadVisualize
BU of 2c1q by Molmil
X-ray structure of biotin binding protein from chicken
Descriptor: BIOTIN, BIOTIN BINDING PROTEIN A, GLYCEROL
Authors:Hytonen, V.P, Niskanen, E.A, Maatta, J.A.E, Huuskonen, J, Helttunen, K.J, Halling, K.K, Slotte, J.P, Nordlund, H.R, Rissanen, K, Johnson, M.S, Salminen, T.A, Kulomaa, M.S, Laitinen, O.H, Airenne, T.T.
Deposit date:2005-09-19
Release date:2007-02-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and Characterization of a Novel Chicken Biotin-Binding Protein a (Bbp-A).
Bmc Struct.Biol., 7, 2007
2C4I
DownloadVisualize
BU of 2c4i by Molmil
Crystal structure of engineered avidin
Descriptor: AVIDIN, BIOTIN, SULFATE ION
Authors:Hytonen, V.P, Horha, J, Airenne, T.T, Niskanen, E.A, Helttunen, K, Johnson, M.S, Salminen, T.A, Kulomaa, M.S, Nordlund, H.R.
Deposit date:2005-10-19
Release date:2006-07-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Controlling Quaternary Structure Assembly: Subunit Interface Engineering and Crystal Structure of Dual Chain Avidin.
J.Mol.Biol., 359, 2006
3POR
DownloadVisualize
BU of 3por by Molmil
PORIN CONFORMATION IN THE ABSENCE OF CALCIUM; REFINED STRUCTURE AT 2.5 ANGSTROMS RESOLUTION
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PORIN
Authors:Weiss, M.S, Schulz, G.E.
Deposit date:1992-11-09
Release date:1993-07-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Porin conformation in the absence of calcium. Refined structure at 2.5 A resolution.
J.Mol.Biol., 231, 1993
2POR
DownloadVisualize
BU of 2por by Molmil
STRUCTURE OF PORIN REFINED AT 1.8 ANGSTROMS RESOLUTION
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CALCIUM ION, PORIN
Authors:Weiss, M.S, Schulz, G.E.
Deposit date:1992-04-24
Release date:1993-07-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of porin refined at 1.8 A resolution.
J.Mol.Biol., 227, 1992
1M15
DownloadVisualize
BU of 1m15 by Molmil
Transition state structure of arginine kinase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ARGININE, MAGNESIUM ION, ...
Authors:Yousef, M.S, Fabiola, F, Gattis, J.L, Somasundaram, T, Chapman, M.S.
Deposit date:2002-06-17
Release date:2002-12-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Refinement of the arginine kinase transition-state analogue complex at 1.2 A resolution: mechanistic insights.
Acta Crystallogr.,Sect.D, 58, 2002
3M10
DownloadVisualize
BU of 3m10 by Molmil
Substrate-free form of Arginine Kinase
Descriptor: Arginine kinase, SULFATE ION
Authors:Yousef, M.S, Clark, S.A, Pruett, P.K, Somasundaram, T, Ellington, W.R, Chapman, M.S.
Deposit date:2010-03-03
Release date:2010-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.727 Å)
Cite:Arginine kinase: joint crystallographic and NMR RDC analyses link substrate-associated motions to intrinsic flexibility.
J.Mol.Biol., 405, 2011
2RLJ
DownloadVisualize
BU of 2rlj by Molmil
NMR Structure of Ebola fusion peptide in SDS micelles at pH 7
Descriptor: Envelope glycoprotein
Authors:Freitas, M.S, Gaspar, L.P, Lorenzoni, M, Almeida, F.C, Tinoco, L.W, Almeida, M.S, Maia, L.F, Degreve, L, Valente, A.P, Silva, J.L.
Deposit date:2007-07-05
Release date:2007-08-07
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure of the Ebola fusion peptide in a membrane-mimetic environment and the interaction with lipid rafts.
J.Biol.Chem., 282, 2007
2UZ2
DownloadVisualize
BU of 2uz2 by Molmil
Crystal structure of Xenavidin
Descriptor: ACETATE ION, BIOTIN, XENAVIDIN
Authors:Helppolainen, S.H, Maatta, J.A.E, Airenne, T.T, Johnson, M.S, Kulomaa, M.S, Nordlund, H.R.
Deposit date:2007-04-24
Release date:2008-06-03
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Characteristics of Xenavidin, the First Frog Avidin from Xenopus Tropicalis.
Bmc Struct.Biol., 9, 2009
1B8C
DownloadVisualize
BU of 1b8c by Molmil
PARVALBUMIN
Descriptor: MAGNESIUM ION, PROTEIN (PARVALBUMIN)
Authors:Cates, M.S, Berry, M.B, Ho, E.L, Li, Q, Potter, J.D, Phillips Jr, G.N.
Deposit date:1999-01-29
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Metal-ion affinity and specificity in EF-hand proteins: coordination geometry and domain plasticity in parvalbumin.
Structure Fold.Des., 7, 1999
1BGO
DownloadVisualize
BU of 1bgo by Molmil
CRYSTAL STRUCTURE OF CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH A COVALENT PEPTIDOMIMETIC INHIBITOR
Descriptor: 1-[2-(3-BIPHENYL)-4-METHYLVALERYL)]AMINO-3-(2-PYRIDYLSULFONYL)AMINO-2-PROPANONE, CATHEPSIN K
Authors:Desjarlais, R.L, Yamashita, D.S, Oh, H.-J, Bondinell, W.E, Uzinskas, I.N, Erhard, K.F, Allen, A.C, Haltiwanger, R.C, Zhao, B, Smith, W.W, Abdel-Meguid, S.S, D'Alessio, K, Janson, C.A, Mcqueney, M.S, Tomaszek, T.A, Levy, M.A, Veber, D.F.
Deposit date:1998-05-29
Release date:1999-06-08
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Use of X-Ray Co-Crystal Structures and Molecular Modeling to Design Potent and Selective Non-Peptide Inhibitors of Cathepsin K
J.Am.Chem.Soc., 120, 1998
1BA9
DownloadVisualize
BU of 1ba9 by Molmil
THE SOLUTION STRUCTURE OF REDUCED MONOMERIC SUPEROXIDE DISMUTASE, NMR, 36 STRUCTURES
Descriptor: COPPER (I) ION, SUPEROXIDE DISMUTASE, ZINC ION
Authors:Banci, L, Benedetto, M, Bertini, I, Del Conte, R, Piccioli, M, Viezzoli, M.S.
Deposit date:1998-04-24
Release date:1998-09-16
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Solution structure of reduced monomeric Q133M2 copper, zinc superoxide dismutase (SOD). Why is SOD a dimeric enzyme?.
Biochemistry, 37, 1998
1BIN
DownloadVisualize
BU of 1bin by Molmil
LEGHEMOGLOBIN A (ACETOMET)
Descriptor: ACETATE ION, LEGHEMOGLOBIN A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Brucker, E.A, Hargrove, M.S, Phillips Jr, G.N.
Deposit date:1996-08-23
Release date:1997-03-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Characterization of recombinant soybean leghemoglobin a and apolar distal histidine mutants.
J.Mol.Biol., 266, 1997
1C0L
DownloadVisualize
BU of 1c0l by Molmil
D-AMINO ACID OXIDASE: STRUCTURE OF SUBSTRATE COMPLEXES AT VERY HIGH RESOLUTION REVEAL THE CHEMICAL REACTTION MECHANISM OF FLAVIN DEHYDROGENATION
Descriptor: D-AMINO ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE, TRIFLUOROALANINE
Authors:Umhau, S, Molla, G, Diederichs, K, Pilone, M.S, Ghisla, S, Welte, W.
Deposit date:1999-07-16
Release date:2000-11-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The x-ray structure of D-amino acid oxidase at very high resolution identifies the chemical mechanism of flavin-dependent substrate dehydrogenation.
Proc.Natl.Acad.Sci.USA, 97, 2000
1C3P
DownloadVisualize
BU of 1c3p by Molmil
CRYSTAL STRUCTURE OF AN HDAC HOMOLOG FROM AQUIFEX AEOLICUS
Descriptor: PROTEIN (HDLP (HISTONE DEACETYLASE-LIKE PROTEIN))
Authors:Finnin, M.S, Donigian, J.R, Pavletich, N.P.
Deposit date:1999-07-28
Release date:1999-09-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of a histone deacetylase homologue bound to the TSA and SAHA inhibitors.
Nature, 401, 1999
1C0I
DownloadVisualize
BU of 1c0i by Molmil
CRYSTAL STRUCTURE OF D-AMINO ACID OXIDASE IN COMPLEX WITH TWO ANTHRANYLATE MOLECULES
Descriptor: 2-AMINOBENZOIC ACID, D-AMINO ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Pollegioni, L, Diederichs, K, Molla, G, Umhau, S, Welte, W, Ghisla, S, Pilone, M.S.
Deposit date:1999-07-16
Release date:2002-02-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Yeast d-amino Acid oxidase: structural basis of its catalytic properties
J.Mol.Biol., 324, 2002
1C3S
DownloadVisualize
BU of 1c3s by Molmil
CRYSTAL STRUCTURE OF AN HDAC HOMOLOG COMPLEXED WITH SAHA
Descriptor: HDLP (HISTONE DEACETYLASE-LIKE PROTEIN), OCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE, ZINC ION
Authors:Finnin, M.S, Donigian, J.R, Pavletich, N.P.
Deposit date:1999-07-28
Release date:1999-09-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of a histone deacetylase homologue bound to the TSA and SAHA inhibitors.
Nature, 401, 1999
2UYW
DownloadVisualize
BU of 2uyw by Molmil
Crystal structure of Xenavidin
Descriptor: BIOTIN, FORMIC ACID, XENAVIDIN
Authors:Helppolainen, S.H, Maatta, J.A.E, Airenne, T.T, Johnson, M.S, Kulomaa, M.S, Nordlund, H.R.
Deposit date:2007-04-20
Release date:2008-05-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Characteristics of Xenavidin, the First Frog Avidin from Xenopus Tropicalis.
Bmc Struct.Biol., 9, 2009
1C2R
DownloadVisualize
BU of 1c2r by Molmil
MOLECULAR STRUCTURE OF CYTOCHROME C2 ISOLATED FROM RHODOBACTER CAPSULATUS DETERMINED AT 2.5 ANGSTROMS RESOLUTION
Descriptor: CYTOCHROME C2, HEME C
Authors:Benning, M.M, Wesenberg, G, Caffrey, M.S, Bartsch, R.G, Meyer, T.E, Cusanovich, M.A, Rayment, I, Holden, H.M.
Deposit date:1991-03-19
Release date:1992-01-15
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular structure of cytochrome c2 isolated from Rhodobacter capsulatus determined at 2.5 A resolution.
J.Mol.Biol., 220, 1991
1C0K
DownloadVisualize
BU of 1c0k by Molmil
CRYSTAL STRUCTURE ANALYSIS OF D-AMINO ACID OXIDASE IN COMPLEX WITH L-LACTATE
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, LACTIC ACID, PROTEIN (D-AMINO ACID OXIDASE)
Authors:Umhau, S, Molla, G, Diederichs, K, Pilone, M.S, Ghisla, S, Welte, W, Pollegioni, L.
Deposit date:1999-07-16
Release date:2000-11-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:The x-ray structure of D-amino acid oxidase at very high resolution identifies the chemical mechanism of flavin-dependent substrate dehydrogenation.
Proc.Natl.Acad.Sci.USA, 97, 2000
1C3R
DownloadVisualize
BU of 1c3r by Molmil
CRYSTAL STRUCTURE OF AN HDAC HOMOLOG COMPLEXED WITH TRICHOSTATIN A
Descriptor: HDLP (HISTONE DEACETYLASE-LIKE PROTEIN), TRICHOSTATIN A, ZINC ION
Authors:Finnin, M.S, Donigian, J.R, Pavletich, N.P.
Deposit date:1999-07-28
Release date:1999-09-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of a histone deacetylase homologue bound to the TSA and SAHA inhibitors.
Nature, 401, 1999
1BP7
DownloadVisualize
BU of 1bp7 by Molmil
GROUP I MOBILE INTRON ENDONUCLEASE I-CREI COMPLEXED WITH HOMING SITE DNA
Descriptor: CALCIUM ION, DNA (5'-D(*CP*GP*AP*AP*AP*CP*TP*GP*TP*CP*TP*CP*AP*CP*GP*AP*CP*GP*TP*TP*TP*TP* GP*C)-3'), DNA (5'-D(*GP*CP*AP*AP*AP*AP*CP*GP*TP*CP*GP*TP*GP*AP*GP*AP*CP*AP*GP*TP*TP*TP* CP*G)-3'), ...
Authors:Jurica, M.S, Monnat Junior, R.J, Stoddard, B.L.
Deposit date:1998-08-13
Release date:1999-01-06
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3 Å)
Cite:DNA recognition and cleavage by the LAGLIDADG homing endonuclease I-CreI.
Mol.Cell, 2, 1998
2Y32
DownloadVisualize
BU of 2y32 by Molmil
Crystal structure of bradavidin
Descriptor: BLR5658 PROTEIN
Authors:Leppiniemi, J, Gronroos, T, Johnson, M.S, Kulomaa, M.S, Hytonen, V.P, Airenne, T.T.
Deposit date:2010-12-17
Release date:2011-12-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure of Bradavidin - C-Terminal Residues Act as Intrinsic Ligands.
Plos One, 7, 2012

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon