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1UM8
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BU of 1um8 by Molmil
Crystal structure of helicobacter pylori ClpX
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit clpX
Authors:Kim, D.Y, Kim, K.K.
Deposit date:2003-09-25
Release date:2003-12-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of ClpX Molecular Chaperone from Helicobacter pylori
J.Biol.Chem., 278, 2003
2L4M
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BU of 2l4m by Molmil
Solution structure of the Zbeta domain of human DAI and its binding modes to B- and Z-DNA
Descriptor: Uncharacterized protein
Authors:Kim, K, Khayrutdinov, B.I, Jeon, Y.H, Kim, K.K.
Deposit date:2010-10-08
Release date:2011-04-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the Zbeta domain of human DNA-dependent activator of IFN-regulatory factors and its binding modes to B- and Z-DNA
Proc.Natl.Acad.Sci.USA, 2011
1L1J
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BU of 1l1j by Molmil
Crystal structure of the protease domain of an ATP-independent heat shock protease HtrA
Descriptor: heat shock protease HtrA
Authors:Kim, D.Y, Kim, D.R, Ha, S.C, Lokanath, N.K, Hwang, H.Y, Kim, K.K.
Deposit date:2002-02-18
Release date:2003-04-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of the Protease Domain of a Heat-shock Protein HtrA from Thermotoga maritima
J.BIOL.CHEM., 278, 2003
1SFU
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BU of 1sfu by Molmil
Crystal structure of the viral Zalpha domain bound to left-handed Z-DNA
Descriptor: 34L protein, 5'-D(*T*CP*GP*CP*GP*CP*G)-3'
Authors:Ha, S.C, Van Quyen, D, Wu, C.A, Lowenhaupt, K, Rich, A, Kim, Y.G, Kim, K.K.
Deposit date:2004-02-20
Release date:2004-08-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:A poxvirus protein forms a complex with left-handed Z-DNA: crystal structure of a Yatapoxvirus Zalpha bound to DNA.
Proc.Natl.Acad.Sci.USA, 101, 2004
4NJR
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BU of 4njr by Molmil
Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa
Descriptor: CARBONATE ION, Probable M18 family aminopeptidase 2, ZINC ION
Authors:Nguyen, D.D, Pandian, R, Kim, D.Y, Ha, S.C, Yun, K.H, Kim, K.S, Kim, J.H, Kim, K.K.
Deposit date:2013-11-11
Release date:2014-04-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa
Biochem.Biophys.Res.Commun., 447, 2014
3M4W
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BU of 3m4w by Molmil
Structural basis for the negative regulation of bacterial stress response by RseB
Descriptor: Sigma-E factor negative regulatory protein, Sigma-E factor regulatory protein rseB, ZINC ION
Authors:Kim, D.Y, Kwon, E, Choi, J.K, Hwang, H.-Y, Kim, K.K.
Deposit date:2010-03-12
Release date:2010-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the negative regulation of bacterial stress response by RseB
Protein Sci., 19, 2010
4P6B
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BU of 4p6b by Molmil
Crystal structure of Est-Y29,a novel penicillin-binding protein/beta-lactamase homolog from a metagenomic library
Descriptor: Est-Y29
Authors:Ngo, T.D, Ryu, B.H, Ju, H.S, Jang, E.J, Kim, K.K, Kim, D.H.
Deposit date:2014-03-24
Release date:2014-09-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic analysis and biochemical applications of a novel penicillin-binding protein/ beta-lactamase homologue from a metagenomic library.
Acta Crystallogr.,Sect.D, 70, 2014
3OEO
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BU of 3oeo by Molmil
The crystal structure E. coli Spy
Descriptor: CADMIUM ION, Spheroplast protein Y
Authors:Kwon, E, Kim, D.Y, Gross, C.A, Gross, J.D, Kim, K.K.
Deposit date:2010-08-13
Release date:2010-09-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The crystal structure Escherichia coli Spy.
Protein Sci., 19, 2010
4P87
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BU of 4p87 by Molmil
Crystal structure of Est-Y29, a novel penicillin-binding protein/beta-lactamase homolog from a metagenomic library
Descriptor: 4-NITROPHENYL PHOSPHATE, Est-Y29
Authors:Ngo, T.D, Ryu, B.H, Ju, H.S, Jang, E.J, Kim, K.K, Kim, D.H.
Deposit date:2014-03-30
Release date:2014-09-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Crystallographic analysis and biochemical applications of a novel penicillin-binding protein/ beta-lactamase homologue from a metagenomic library.
Acta Crystallogr.,Sect.D, 70, 2014
4P85
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BU of 4p85 by Molmil
Crystal structure of Est-Y29, a novel penicillin-binding protein/beta-lactamase homolog from a metagenomic library
Descriptor: DIETHYL PHOSPHONATE, Est-Y29
Authors:Ngo, T.D, Ryu, B.H, Ju, H.S, Jang, E.J, Kim, K.K, Kim, D.H.
Deposit date:2014-03-30
Release date:2014-09-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic analysis and biochemical applications of a novel penicillin-binding protein/ beta-lactamase homologue from a metagenomic library.
Acta Crystallogr.,Sect.D, 70, 2014
3EYI
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BU of 3eyi by Molmil
The crystal structure of the second Z-DNA binding domain of human DAI (ZBP1) in complex with Z-DNA
Descriptor: 5'-TCGCGCG-3', Z-DNA-binding protein 1
Authors:Ha, S.C, Kim, K.K.
Deposit date:2008-10-21
Release date:2009-01-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The crystal structure of the second Z-DNA binding domain of human DAI (ZBP1) in complex with Z-DNA reveals an unusual binding mode to Z-DNA.
Proc.Natl.Acad.Sci.USA, 105, 2008
4YGQ
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BU of 4ygq by Molmil
Crystal structure of HAD phosphatase from Thermococcus onnurineus
Descriptor: Hydrolase, TERTIARY-BUTYL ALCOHOL
Authors:Ngo, T.D, Le, B.V, Subramani, V.K, Nguyen, C.M.T, Lee, H.S, Cho, Y, Kim, K.K, Hwang, H.Y.
Deposit date:2015-02-26
Release date:2015-04-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the substrate selectivity of a HAD phosphatase from Thermococcus onnurineus NA1
Biochem.Biophys.Res.Commun., 461, 2015
4YGR
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BU of 4ygr by Molmil
Crystal structure of HAD phosphatase from Thermococcus onnurineus
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Hydrolase, MAGNESIUM ION
Authors:Ngo, T.D, Le, B.V, Subramani, V.K, Nguyen, C.M.T, Lee, H.S, Cho, Y, Kim, K.K, Hwang, H.Y.
Deposit date:2015-02-26
Release date:2015-04-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:Structural basis for the substrate selectivity of a HAD phosphatase from Thermococcus onnurineus NA1
Biochem.Biophys.Res.Commun., 461, 2015
4YGS
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BU of 4ygs by Molmil
Crystal structure of HAD phosphatase from Thermococcus onnurineus
Descriptor: CITRIC ACID, Hydrolase, MAGNESIUM ION
Authors:Ngo, T.D, Le, B.V, Subramani, V.K, Nguyen, C.M.T, Lee, H.S, Cho, Y, Kim, K.K, Hwang, H.Y.
Deposit date:2015-02-26
Release date:2015-04-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for the substrate selectivity of a HAD phosphatase from Thermococcus onnurineus NA1
Biochem.Biophys.Res.Commun., 461, 2015
2P52
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BU of 2p52 by Molmil
mouse p53 DNA-binding domain in zinc-free oxidized state
Descriptor: Cellular tumor antigen p53
Authors:Kwon, E, Kim, D.Y, Suh, S.W, Kim, K.K.
Deposit date:2007-03-14
Release date:2008-01-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of the mouse p53 core domain in zinc-free state.
Proteins, 70, 2008
2P4B
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BU of 2p4b by Molmil
Crystal structure of E.coli RseB
Descriptor: Sigma-E factor regulatory protein rseB, octyl beta-D-glucopyranoside
Authors:Kim, D.Y, Kim, K.K.
Deposit date:2007-03-12
Release date:2007-05-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of RseB and a model of its binding mode to RseA
Proc.Natl.Acad.Sci.Usa, 104, 2007
4KMF
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BU of 4kmf by Molmil
Crystal structure of Zalpha domain from Carassius auratus PKZ in complex with Z-DNA
Descriptor: DNA (5'-D(*TP*CP*GP*CP*GP*CP*G)-3'), Interferon-inducible and double-stranded-dependent eIF-2kinase, MANGANESE (II) ION
Authors:Kim, D, Kim, K.K.
Deposit date:2013-05-08
Release date:2013-07-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Distinct Z-DNA binding mode of a PKR-like protein kinase containing a Z-DNA binding domain (PKZ).
Nucleic Acids Res., 42, 2014
1PCV
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BU of 1pcv by Molmil
Crystal structure of osmotin, a plant antifungal protein
Descriptor: osmotin
Authors:Min, K, Ha, S.C, Yun, D.-J, Bressan, R.A, Kim, K.K.
Deposit date:2003-05-16
Release date:2004-02-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of osmotin, a plant antifungal protein
PROTEINS: STRUCT.,FUNCT.,GENET., 54, 2004
3SH5
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BU of 3sh5 by Molmil
Calcium-bound Laminin G like domain 3 from human perlecan
Descriptor: CALCIUM ION, LG3 peptide
Authors:Van Le, B, Kim, K.K.
Deposit date:2011-06-16
Release date:2011-12-14
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of the LG3 Domain of Endorepellin, an Angiogenesis Inhibitor.
J.Mol.Biol., 414, 2011
3SH4
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BU of 3sh4 by Molmil
Laminin G like domain 3 from human perlecan
Descriptor: LG3 peptide
Authors:Van Le, B, Kim, K.K.
Deposit date:2011-06-15
Release date:2011-12-14
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of the LG3 Domain of Endorepellin, an Angiogenesis Inhibitor.
J.Mol.Biol., 414, 2011
3F21
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BU of 3f21 by Molmil
Crystal structure of Zalpha in complex with d(CACGTG)
Descriptor: DNA (5'-D(*DTP*DCP*DAP*DCP*DGP*DTP*DG)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Ha, S.C, Choi, J, Kim, K.K.
Deposit date:2008-10-28
Release date:2008-12-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1
Nucleic Acids Res., 37, 2009
3F23
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BU of 3f23 by Molmil
Crystal structure of Zalpha in complex with d(CGGCCG)
Descriptor: DNA (5'-D(*DTP*DCP*DGP*DGP*DCP*DCP*DG)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Ha, S.C, Choi, J, Kim, K.K.
Deposit date:2008-10-28
Release date:2008-12-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1
Nucleic Acids Res., 37, 2009
3F22
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BU of 3f22 by Molmil
Crystal structure of Zalpha in complex with d(CGTACG)
Descriptor: DNA (5'-D(*DTP*DCP*DGP*DTP*DAP*DCP*DG)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Ha, S.C, Choi, J, Kim, K.K.
Deposit date:2008-10-28
Release date:2008-12-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1
Nucleic Acids Res., 37, 2009
3U7M
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BU of 3u7m by Molmil
Crystal structures of the Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
Descriptor: N-((2R,4S)-2-butyl-4-(3-(2-fluorophenyl)ureido)-5-methyl-3-oxohexyl)-N-hydroxyformamide, Peptide deformylase, ZINC ION
Authors:Lee, S.J, Lee, S.-J, Lee, S.K, Yoon, H.-J, Lee, H.H, Kim, K.K, Lee, B.J, Suh, S.W.
Deposit date:2011-10-14
Release date:2012-06-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structures of Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
Acta Crystallogr.,Sect.D, 68, 2012
3QBQ
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BU of 3qbq by Molmil
Crystal structure of extracellular domains of mouse RANK-RANKL complex
Descriptor: Tumor necrosis factor ligand superfamily member 11, Tumor necrosis factor receptor superfamily member 11A
Authors:Ta, H.M, Nguyen, G.T.T, Jin, H.M, Choi, J.K, Park, H, Kim, N.S, Hwang, H.Y, Kim, K.K.
Deposit date:2011-01-13
Release date:2011-03-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based development of a receptor activator of nuclear factor-kappaB ligand (RANKL) inhibitor peptide and molecular basis for osteopetrosis
Proc.Natl.Acad.Sci.USA, 107, 2010

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