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1YF2
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BU of 1yf2 by Molmil
Three-dimensional structure of DNA sequence specificity (S) subunit of a type I restriction-modification enzyme and its functional implications
分子名称: Type I restriction-modification enzyme, S subunit
著者Kim, J.S, Degiovanni, A, Jancarik, J, Adams, P.D, Yokota, H.A, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2004-12-30
公開日2005-02-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of DNA sequence specificity subunit of a type I restriction-modification enzyme and its functional implications.
Proc.Natl.Acad.Sci.USA, 102, 2005
5CHI
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BU of 5chi by Molmil
Crystal structure of PF2046 in complex with ssDNA
分子名称: DNA (5'-D(P*TP*TP*TP*T)-3'), MAGNESIUM ION, Uncharacterized protein
著者Kim, J.S, Hwang, K.Y, Lee, W.C.
登録日2015-07-10
公開日2016-08-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.472 Å)
主引用文献Structural basis of two-nucleotide removal of ssDNA by a cryptic RNase H fold 3'-5' exonuclease PF2046 from Pyrococcus furiosus
to be published
1SMA
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BU of 1sma by Molmil
CRYSTAL STRUCTURE OF A MALTOGENIC AMYLASE
分子名称: MALTOGENIC AMYLASE
著者Kim, J.S, Cha, S.S, Oh, B.H.
登録日1999-04-21
公開日2000-04-26
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of a maltogenic amylase provides insights into a catalytic versatility.
J.Biol.Chem., 274, 1999
1T6S
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BU of 1t6s by Molmil
Crystal structure of a conserved hypothetical protein from Chlorobium tepidum
分子名称: NITRATE ION, conserved hypothetical protein
著者Kim, J.S, Shin, D.H, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2004-05-07
公開日2004-12-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of ScpB from Chlorobium tepidum, a protein involved in chromosome partitioning.
Proteins, 62, 2006
1R6V
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BU of 1r6v by Molmil
Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin
分子名称: CALCIUM ION, subtilisin-like serine protease
著者Kim, J.S, Kluskens, L.D, de Vos, W.M, Huber, R, van der Oost, J.
登録日2003-10-17
公開日2004-10-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin.
J.Mol.Biol., 335, 2004
4WFQ
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BU of 4wfq by Molmil
Crystal structure of TFIIH subunit
分子名称: GLYCEROL, SULFATE ION, Suppressor of stem-loop protein 1
著者Cho, Y, Kim, J.S, Lim, H.S.
登録日2014-09-17
公開日2015-02-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the Rad3/XPD regulatory domain of Ssl1/p44
J.Biol.Chem., 290, 2015
5C22
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BU of 5c22 by Molmil
Crystal structure of Zn-bound HlyD from E. coli
分子名称: Chromosomal hemolysin D, ZINC ION
著者Ha, N.C, Kim, J.S.
登録日2015-06-15
公開日2016-02-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Crystal Structure of a Soluble Fragment of the Membrane Fusion Protein HlyD in a Type I Secretion System of Gram-Negative Bacteria
Structure, 24, 2016
5C21
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Crystal structure of native HlyD from E. coli
分子名称: Chromosomal hemolysin D
著者Ha, N.C, Kim, J.S, Yoon, B.Y.
登録日2015-06-15
公開日2016-02-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of a Soluble Fragment of the Membrane Fusion Protein HlyD in a Type I Secretion System of Gram-Negative Bacteria
Structure, 24, 2016
5C0Q
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BU of 5c0q by Molmil
Crystal structure of Zn bound CbsA from Thermotoga neapolitana
分子名称: Beta-N-acetylhexosaminidase, ZINC ION
著者Ha, N.C, Kim, J.S, Yoon, B.Y.
登録日2015-06-12
公開日2015-09-16
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Crystal structure of beta-N-acetylglucosaminidase CbsA from Thermotoga neapolitana
Biochem.Biophys.Res.Commun., 464, 2015
5BZA
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BU of 5bza by Molmil
Crystal structure of CbsA from Thermotoga neapolitana
分子名称: Beta-N-acetylhexosaminidase, CADMIUM ION
著者Ha, N.C, Kim, J.S, Yoon, B.Y.
登録日2015-06-11
公開日2015-09-16
最終更新日2020-02-19
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Crystal structure of beta-N-acetylglucosaminidase CbsA from Thermotoga neapolitana
Biochem.Biophys.Res.Commun., 464, 2015
4QA8
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BU of 4qa8 by Molmil
Crystal structure of LprF from Mycobacterium bovis
分子名称: (2R)-2-(dodecanoyloxy)propyl (4E,6E,8E,10E,12E)-pentadeca-4,6,8,10,12-pentaenoate, Putative lipoprotein LprF
著者Ha, N.C, Jiao, L, Kim, J.S.
登録日2014-05-02
公開日2014-10-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystal structure and functional implications of LprF from Mycobacterium tuberculosis and M. bovis
Acta Crystallogr.,Sect.D, 70, 2014
8I08
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BU of 8i08 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase quadruple mutant
分子名称: 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
著者Kim, J.H, Kim, J.S.
登録日2023-01-10
公開日2023-11-22
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose
Int.J.Biol.Macromol., 253, 2023
8I01
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BU of 8i01 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase
分子名称: 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
著者Kim, J.H, Kim, J.S.
登録日2023-01-10
公開日2023-11-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose
Int.J.Biol.Macromol., 253, 2023
8I07
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BU of 8i07 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase double mutant in complex with glycolaldehyde
分子名称: 2-oxidanylethanal, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
著者Kim, J.H, Kim, J.S.
登録日2023-01-10
公開日2023-11-22
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose
Int.J.Biol.Macromol., 253, 2023
8I05
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BU of 8i05 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase double mutant
分子名称: 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
著者Kim, J.H, Kim, J.S.
登録日2023-01-10
公開日2023-11-22
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose
Int.J.Biol.Macromol., 253, 2023
3BF7
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BU of 3bf7 by Molmil
1.1 resolution structure of ybfF, a new esterase from Escherichia coli: a unique substrate-binding crevice generated by domain arrangement
分子名称: Esterase YbfF
著者Park, S.K, Kim, J.S.
登録日2007-11-21
公開日2008-01-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献High-resolution structure of ybfF from Escherichia coli K12: a unique substrate-binding crevice generated by domain arrangement
J.Mol.Biol., 376, 2008
3BF8
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1.1 resolution structure of ybfF, a new esterase from Escherichia coli: a unique substrate-binding crevice generated by domain arrangement
分子名称: Esterase YbfF, MALONIC ACID
著者Park, S.K, Kim, J.S.
登録日2007-11-21
公開日2008-01-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献High-resolution structure of ybfF from Escherichia coli K12: a unique substrate-binding crevice generated by domain arrangement
J.Mol.Biol., 376, 2008
7CT6
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BU of 7ct6 by Molmil
Crystal structure of GCL from Deinococcus metallilatus
分子名称: Glyoxylate carboligase
著者Kim, J.H, Kim, J.S.
登録日2020-08-18
公開日2021-08-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Glyoxylate carboligase-based whole-cell biotransformation of formaldehyde into ethylene glycol via glycolaldehyde.
Green Chem, 1, 2022
7EEW
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BU of 7eew by Molmil
Crystal structure of the intact MTase from Vibrio vulnificus YJ016 in complex with the DNA-mimicking Ocr protein and the S-adenosyl-L-homocysteine (SAH)
分子名称: Overcome classical restriction gp0.3, S-ADENOSYL-L-HOMOCYSTEINE, Type I restriction-modification system methyltransferase subunit
著者Seo, P.W, Park, S.Y, Kim, J.S.
登録日2021-03-19
公開日2022-03-23
最終更新日2022-07-13
実験手法X-RAY DIFFRACTION (2.896 Å)
主引用文献Structural features of a minimal intact methyltransferase of a type I restriction-modification system.
Int.J.Biol.Macromol., 208, 2022
6AE3
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BU of 6ae3 by Molmil
Crystal structure of GSK3beta complexed with Morin
分子名称: 2-[2,4-bis(oxidanyl)phenyl]-3,5,7-tris(oxidanyl)chromen-4-one, GLYCEROL, Glycogen synthase kinase-3 beta
著者Kim, K.L, Cha, J.S, Kim, J.S, Ahn, J.S, Ha, N.C, Cho, H.S.
登録日2018-08-03
公開日2018-09-19
最終更新日2018-10-03
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Crystal structure of GSK3 beta in complex with the flavonoid, morin
Biochem. Biophys. Res. Commun., 504, 2018
7XZ3
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BU of 7xz3 by Molmil
Crystal structure of the Type I-B CRISPR-associated protein, Csh2 from Thermobaculum terrenum
分子名称: CRISPR-associated protein, Csh2 family
著者Seo, P.W, Gu, D.H, Park, S.Y, Kim, J.S.
登録日2022-06-02
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.889 Å)
主引用文献Structural characterization of the type I-B CRISPR Cas7 from Thermobaculum terrenum.
Biochim Biophys Acta Proteins Proteom, 1871, 2023
7CXT
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BU of 7cxt by Molmil
Crystal structure of a GDP-6-OMe-4-keto-L-xylo-heptose reductase from C.jejuni
分子名称: GDP-L-fucose synthase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Kim, J.H, Kim, J.S.
登録日2020-09-02
公開日2021-04-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of a GDP-6-OMe-4-keto-L-xylo-heptose reductase from Campylobacter jejuni.
Proteins, 2021
3AV0
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BU of 3av0 by Molmil
Crystal structure of Mre11-Rad50 bound to ATP S
分子名称: DNA double-strand break repair protein mre11, DNA double-strand break repair rad50 ATPase, GLYCEROL, ...
著者Lim, H.S, Kim, J.S, Cho, Y.
登録日2011-02-18
公開日2011-05-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal Structure of the Mre11-Rad50-ATP S Complex: Understanding the Interplay between Mre11 and Rad50
To be Published
3UFC
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BU of 3ufc by Molmil
Characterization of a Cas6-related gene from Pyrococcus furiosus
分子名称: Putative uncharacterized protein
著者Park, H.M, Kim, J.S.
登録日2011-11-01
公開日2012-03-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystal structure of a Cas6 paralogous protein from Pyrococcus furiosus
Proteins, 80, 2012
6KQB
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BU of 6kqb by Molmil
A long chain secondary alcohol dehydrogenase of Micrococcus luteus
分子名称: 3-hydroxybutyryl-CoA dehydrogenase
著者Kim, H.J, Kim, J.S.
登録日2019-08-16
公開日2020-08-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.261 Å)
主引用文献Cofactor specificity engineering of a long-chain secondary alcohol dehydrogenase from Micrococcus luteus for redox-neutral biotransformation of fatty acids.
Chem.Commun.(Camb.), 55, 2019

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