1IR1
| Crystal Structure of Spinach Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase (Rubisco) Complexed with CO2, Mg2+ and 2-Carboxyarabinitol-1,5-Bisphosphate | 分子名称: | 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, Large subunit of Rubisco, MAGNESIUM ION, ... | 著者 | Mizohata, E, Matsumura, H, Okano, Y, Kumei, M, Takuma, H, Onodera, J, Kato, K, Shibata, N, Inoue, T, Yokota, A, Kai, Y. | 登録日 | 2001-08-31 | 公開日 | 2002-03-13 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of activated ribulose-1,5-bisphosphate carboxylase/oxygenase from green alga Chlamydomonas reinhardtii complexed with 2-carboxyarabinitol-1,5-bisphosphate. J.Mol.Biol., 316, 2002
|
|
6K33
| Structure of PSI-isiA supercomplex from Thermosynechococcus vulcanus | 分子名称: | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ... | 著者 | Akita, F, Nagao, R, Kato, K, Shen, J.R, Miyazaki, N. | 登録日 | 2019-05-16 | 公開日 | 2020-05-20 | 最終更新日 | 2020-05-27 | 実験手法 | ELECTRON MICROSCOPY (2.74 Å) | 主引用文献 | Structure of a cyanobacterial photosystem I surrounded by octadecameric IsiA antenna proteins. Commun Biol, 3, 2020
|
|
7CAP
| Cyclic Lys48-linked triubiquitin | 分子名称: | Ubiquitin, ZINC ION | 著者 | Hiranyakorn, M, Yanaka, S, Satoh, T, Wilasri, T, Jityuti, B, Yagi-Utsumi, T, Kato, K. | 登録日 | 2020-06-09 | 公開日 | 2020-08-19 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.33 Å) | 主引用文献 | NMR Characterization of Conformational Interconversions of Lys48-Linked Ubiquitin Chains. Int J Mol Sci, 21, 2020
|
|
7Y8Q
| Amyloid-beta assemblage on GM1-containing membranes | 分子名称: | Amyloid-beta protein 40 | 著者 | Yagi-Utsumi, M, Itoh, S.G, Okumura, H, Yanagisawa, K, Kato, K, Nishimura, K. | 登録日 | 2022-06-24 | 公開日 | 2023-07-05 | 最終更新日 | 2024-05-15 | 実験手法 | SOLID-STATE NMR | 主引用文献 | The Double-Layered Structure of Amyloid-beta Assemblage on GM1-Containing Membranes Catalytically Promotes Fibrillization. Acs Chem Neurosci, 14, 2023
|
|
6KX0
| Crystal structure of SN-101 mAb non-liganded form | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Fab Fragment-SN-101-Heavy chain, Fab Fragment-SN-101-Light chain | 著者 | Wakui, H, Tanaka, Y, Kato, K, Ose, T, Matsumoto, I, Min, Y, Tachibana, T, Nishimura, S.-I. | 登録日 | 2019-09-09 | 公開日 | 2020-07-29 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.404 Å) | 主引用文献 | A straightforward approach to antibodies recognising cancer specific glycopeptidic neoepitopes Chem Sci, 11, 2020
|
|
8H25
| Lacticaseibacillus casei GH35 beta-galactosidase LBCZ_0230 | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-galactosidase, DI(HYDROXYETHYL)ETHER, ... | 著者 | Saburi, W, Ota, T, Kato, K, Tagami, T, Yamashita, K, Yao, M, Mori, H. | 登録日 | 2022-10-04 | 公開日 | 2023-08-16 | 最終更新日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (2.295 Å) | 主引用文献 | Function and Structure of Lacticaseibacillus casei GH35 beta-Galactosidase LBCZ_0230 with High Hydrolytic Activity to Lacto- N -biose I and Galacto- N -biose. J Appl Glycosci (1999), 70, 2023
|
|
6KX1
| Crystal structure of SN-101 mAb in complex with MUC1 glycopeptide | 分子名称: | 2-acetamido-2-deoxy-alpha-D-galactopyranose, Fab Fragment-SN-101-Heavy chain, Fab Fragment-SN-101-Light chain, ... | 著者 | Wakui, H, Tanaka, Y, Kato, K, Ose, T, Matsumoto, I, Min, Y, Tachibana, T, Nishimura, S.-I. | 登録日 | 2019-09-09 | 公開日 | 2020-07-29 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.773 Å) | 主引用文献 | A straightforward approach to antibodies recognising cancer specific glycopeptidic neoepitopes Chem Sci, 11, 2020
|
|
6L4T
| Structure of the peripheral FCPI from diatom | 分子名称: | (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'-yl acetate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ... | 著者 | Nagao, R, Kato, K, Miyazaki, N, Akita, F, Shen, J.R. | 登録日 | 2019-10-21 | 公開日 | 2020-05-20 | 実験手法 | ELECTRON MICROSCOPY (2.6 Å) | 主引用文献 | Structure of photosystem I-light-harvesting supercomplex from a red-lineage diatom Nat Commun, 2020
|
|
6L4U
| Structure of the PSI-FCPI supercomplex from diatom | 分子名称: | (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'-yl acetate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ... | 著者 | Nagao, R, Kato, K, Miyazaki, N, Akita, F, Shen, J.R. | 登録日 | 2019-10-21 | 公開日 | 2020-05-20 | 実験手法 | ELECTRON MICROSCOPY (2.4 Å) | 主引用文献 | Structure of photosystem I-light-harvesting supercomplex from a red-lineage diatom Nat Commun, 2020
|
|
5XW7
| |
8IN4
| Eisenia hydrolysis-enhancing protein from Aplysia kurodai | 分子名称: | 25 kDa polyphenol-binding protein, ACETYL GROUP, GLYCEROL | 著者 | Sun, X.M, Ye, Y.X, Kato, K, Yu, J, Yao, M. | 登録日 | 2023-03-08 | 公開日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | 主引用文献 | Structural basis of EHEP-mediated offense against phlorotannin-induced defense from brown algae to protect aku BGL activity. Elife, 12, 2023
|
|
8IN6
| Eisenia hydrolysis-enhancing protein from Aplysia kurodai complex with tannic acid | 分子名称: | 25 kDa polyphenol-binding protein, BETA-1,2,3,4,6-PENTA-O-GALLOYL-D-GLUCOPYRANOSE | 著者 | Sun, X.M, Ye, Y.X, Kato, K, Yu, J, Yao, M. | 登録日 | 2023-03-08 | 公開日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural basis of EHEP-mediated offense against phlorotannin-induced defense from brown algae to protect aku BGL activity. Elife, 12, 2023
|
|
8IN1
| beta-glucosidase protein from Aplysia kurodai | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-Glucosidase, alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Sun, X.M, Ye, Y.X, Kato, K, Yu, J, Yao, M. | 登録日 | 2023-03-08 | 公開日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Structural basis of EHEP-mediated offense against phlorotannin-induced defense from brown algae to protect aku BGL activity. Elife, 12, 2023
|
|
8IN3
| Eisenia hydrolysis-enhancing protein from Aplysia kurodai | 分子名称: | 25 kDa polyphenol-binding protein, GLYCEROL | 著者 | Sun, X.M, Ye, Y.X, Kato, K, Yu, J, Yao, M. | 登録日 | 2023-03-08 | 公開日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.15 Å) | 主引用文献 | Structural basis of EHEP-mediated offense against phlorotannin-induced defense from brown algae to protect aku BGL activity. Elife, 12, 2023
|
|
7EDA
| Structure of monomeric photosystem II | 分子名称: | (3R)-beta,beta-caroten-3-ol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ... | 著者 | Yu, H, Hamaguchi, T, Nakajima, Y, Kato, K, kawakami, K, Akita, F, Yonekura, K, Shen, J.R. | 登録日 | 2021-03-15 | 公開日 | 2021-07-07 | 最終更新日 | 2021-08-04 | 実験手法 | ELECTRON MICROSCOPY (2.78 Å) | 主引用文献 | Cryo-EM structure of monomeric photosystem II at 2.78 angstrom resolution reveals factors important for the formation of dimer. Biochim Biophys Acta Bioenerg, 1862, 2021
|
|
5AXM
| Crystal structure of Thg1 like protein (TLP) with tRNA(Phe) | 分子名称: | MAGNESIUM ION, RNA (75-MER), tRNA(His)-5'-guanylyltransferase (Thg1) like protein | 著者 | Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M. | 登録日 | 2015-07-31 | 公開日 | 2016-08-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.21 Å) | 主引用文献 | Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein Sci Adv, 2, 2016
|
|
5AXL
| Crystal structure of Thg1 like protein (TLP) with GTP | 分子名称: | GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, tRNA(His)-5'-guanylyltransferase (Thg1) like protein | 著者 | Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M. | 登録日 | 2015-07-31 | 公開日 | 2016-08-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.998 Å) | 主引用文献 | Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein Sci Adv, 2, 2016
|
|
5AXK
| Crystal structure of Thg1 like protein (TLP) | 分子名称: | GLYCEROL, tRNA(His)-5'-guanylyltransferase (Thg1) like protein | 著者 | Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M. | 登録日 | 2015-07-31 | 公開日 | 2016-08-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.29 Å) | 主引用文献 | Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein Sci Adv, 2, 2016
|
|
5AXN
| Crystal structure of Thg1 like protein (TLP) with tRNA(Phe) and GDPNP | 分子名称: | MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, RNA (75-MER), ... | 著者 | Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M. | 登録日 | 2015-07-31 | 公開日 | 2016-08-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.703 Å) | 主引用文献 | Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein Sci Adv, 2, 2016
|
|
5CRW
| |
5DKZ
| Crystal structure of glucosidase II alpha subunit (alpha3-Glc2-bound from) | 分子名称: | Alpha glucosidase-like protein, alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose | 著者 | Satoh, T, Toshimori, T, Yan, G, Yamaguchi, T, Kato, K. | 登録日 | 2015-09-04 | 公開日 | 2016-01-27 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control. Sci Rep, 6, 2016
|
|
5DKX
| Crystal structure of glucosidase II alpha subunit (Tris-bound from) | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha glucosidase-like protein, CHLORIDE ION | 著者 | Satoh, T, Toshimori, T, Yan, G, Yamaguchi, T, Kato, K. | 登録日 | 2015-09-04 | 公開日 | 2016-01-27 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | 主引用文献 | Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control. Sci Rep, 6, 2016
|
|
5DL0
| Crystal structure of glucosidase II alpha subunit (Glc1Man2-bound from) | 分子名称: | Alpha glucosidase-like protein, alpha-D-glucopyranose-(1-3)-alpha-D-mannopyranose | 著者 | Satoh, T, Toshimori, T, Yan, G, Yamaguchi, T, Kato, K. | 登録日 | 2015-09-04 | 公開日 | 2016-01-27 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control. Sci Rep, 6, 2016
|
|
5DKY
| Crystal structure of glucosidase II alpha subunit (DNJ-bound from) | 分子名称: | 1-DEOXYNOJIRIMYCIN, Alpha glucosidase-like protein | 著者 | Satoh, T, Toshimori, T, Yan, G, Yamaguchi, T, Kato, K. | 登録日 | 2015-09-04 | 公開日 | 2016-01-27 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control. Sci Rep, 6, 2016
|
|
5GIJ
| Crystal structure of TDR-TDIF complex | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeat receptor-like protein kinase TDR, ... | 著者 | Morita, J, Kato, K, Ishitani, R, Nishimasu, H, Nureki, O. | 登録日 | 2016-06-23 | 公開日 | 2016-08-24 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Crystal structure of the plant receptor-like kinase TDR in complex with the TDIF peptide Nat Commun, 7, 2016
|
|