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3GVT
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BU of 3gvt by Molmil
Structure and RNA binding of the mouse Pumilio-2 Puf Domain
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GLYCEROL, Pumilio homolog 2
著者Jenkins, H.T, Edwards, T.A.
登録日2009-03-31
公開日2009-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure and RNA binding of the mouse Pumilio-2 Puf domain
J.Struct.Biol., 167, 2009
3GVO
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BU of 3gvo by Molmil
Structure and RNA binding of the mouse Pumilio-2 Puf Domain
分子名称: DITHIANE DIOL, GLYCEROL, Pumilio homolog 2
著者Jenkins, H.T, Edwards, T.A.
登録日2009-03-31
公開日2009-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure and RNA binding of the mouse Pumilio-2 Puf domain
J.Struct.Biol., 167, 2009
2XS2
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BU of 2xs2 by Molmil
Crystal structure of the RRM domain of mouse Deleted in azoospermia-like in complex with RNA, UUGUUCUU
分子名称: 5'-R(*UP*UP*GP*UP*UP*CP*UP*U)-3', DELETED IN AZOOSPERMIA-LIKE, ZINC ION
著者Jenkins, H.T, Edwards, T.A.
登録日2010-09-24
公開日2011-10-05
最終更新日2018-06-13
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Kinked beta-strands mediate high-affinity recognition of mRNA targets by the germ-cell regulator DAZL.
Proc. Natl. Acad. Sci. U.S.A., 108, 2011
2XS7
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BU of 2xs7 by Molmil
Crystal structure of the RRM domain of mouse Deleted in azoospermia- like in complex with Sycp3 RNA, UUGUUU
分子名称: 5'-R(*UP*UP*GP*UP*UP*UP)-3', DELETED IN AZOOSPERMIA-LIKE, ZINC ION
著者Jenkins, H.T, Edwards, T.A.
登録日2010-09-24
公開日2011-10-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl
Proc.Natl.Acad.Sci.USA, 108, 2011
2XS5
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BU of 2xs5 by Molmil
Crystal structure of the RRM domain of mouse Deleted in azoospermia- like in complex with Mvh RNA, UGUUC
分子名称: 5'-R(*UP*GP*UP*UP*CP)-3', DELETED IN AZOOSPERMIA-LIKE, DI(HYDROXYETHYL)ETHER
著者Jenkins, H.T, Edwards, T.A.
登録日2010-09-24
公開日2011-10-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl
Proc.Natl.Acad.Sci.USA, 108, 2011
2XSF
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BU of 2xsf by Molmil
Crystal structure of the RRM domain of mouse Deleted in azoospermia- like
分子名称: DELETED IN AZOOSPERMIA-LIKE, GLYCEROL, SULFATE ION
著者Jenkins, H.T, Edwards, T.A.
登録日2010-09-28
公開日2011-10-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl
Proc.Natl.Acad.Sci.USA, 108, 2011
2A55
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BU of 2a55 by Molmil
Solution structure of the two N-terminal CCP modules of C4b-binding protein (C4BP) alpha-chain.
分子名称: C4b-binding protein
著者Jenkins, H.T, Mark, L, Ball, G, Lindahl, G, Uhrin, D, Blom, A.M, Barlow, P.N.
登録日2005-06-30
公開日2005-12-13
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Human C4b-binding Protein, Structural Basis for Interaction with Streptococcal M Protein, a Major Bacterial Virulence Factor
J.Biol.Chem., 281, 2006
5MFX
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BU of 5mfx by Molmil
Zika NS3 helicase:RNA complex
分子名称: ACETATE ION, CITRATE ANION, Genome polyprotein, ...
著者Jenkins, H.T, Ge, M, Chechik, M, Greive, S.J, Antson, A.A.
登録日2016-11-18
公開日2017-01-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.598 Å)
主引用文献How Zika virus NS3 helicase grips the first nucleotide of the leading RNA strand
To Be Published
8POP
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BU of 8pop by Molmil
HK97 small terminase in complex with DNA
分子名称: DNA (31-MER), Terminase small subunit
著者Chechik, M, Greive, S.J, Antson, A.A, Jenkins, H.T.
登録日2023-07-05
公開日2023-08-09
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of HK97 small terminase:DNA complex unveils a novel DNA binding mechanism by a circular protein.
Biorxiv, 2023
6S0J
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BU of 6s0j by Molmil
Structure of Zika virus NS3 helicase in complex with ADP-MgF3(H2O)-
分子名称: ADENOSINE-5'-DIPHOSPHATE, Genome polyprotein, MAGNESIUM ION, ...
著者Ge, M, Molt Jr, R.W, Jenkins, H.T, Blackburn, G.M, Jin, Y, Antson, A.A.
登録日2019-06-16
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献New MFx transition state analog reveals the molecular mechanism of ATP hydrolysis by the Zika virus NS3 helicase
To Be Published
6RWZ
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BU of 6rwz by Molmil
Structure of Zika virus NS3 helicase in complex with ADP-BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MANGANESE (II) ION, ...
著者Ge, M, Molt Jr, R.W, Jenkins, H.T, Blackburn, G.M, Jin, Y, Antson, A.A.
登録日2019-06-07
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献New MFx transition state analog reveals molecular mechanism of NTP hydrolysis by the Zika virus NS3 helicase
To Be Published
6SE1
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BU of 6se1 by Molmil
Structure of Salmonella ser. Paratyphi A lipopolysaccharide acetyltransferase periplasmic domain
分子名称: DI(HYDROXYETHYL)ETHER, Putative lipopolysaccharide modification acyltransferase, SULFATE ION
著者Tindall, S.N, Pearson, C, Herman, R, Jenkins, H.T, Thomas, G.H, Potts, J.R, Van der Woude, M.
登録日2019-07-29
公開日2020-08-26
最終更新日2020-09-16
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Acetylation of Surface Carbohydrates in Bacterial Pathogens Requires Coordinated Action of a Two-Domain Membrane-Bound Acyltransferase.
Mbio, 11, 2020
6EJQ
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BU of 6ejq by Molmil
Crystal structure of a C-terminally truncated small terminase protein from the thermophilic bacteriophage G20c
分子名称: Terminase small subunit
著者Xu, R.G, Loredo-Varela, J, Jenkins, H.T, Antson, A.A.
登録日2017-09-22
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a C-terminally truncated small terminase protein from the thermophilic bacteriophage G20c
To Be Published
7AVJ
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BU of 7avj by Molmil
Streptococcal High Identity Repeats in Tandem (SHIRT) domain 2 from cell surface protein SGO_0707
分子名称: LPXTG cell wall surface protein
著者Whelan, F, Jenkins, H.T, Potts, J.R.
登録日2020-11-05
公開日2021-06-09
最終更新日2021-06-16
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Periscope Proteins are variable-length regulators of bacterial cell surface interactions.
Proc.Natl.Acad.Sci.USA, 118, 2021
7NT6
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BU of 7nt6 by Molmil
CryoEM structure of the Nipah virus nucleocapsid spiral clam-shaped assembly
分子名称: Nucleoprotein, RNA (42-MER), RNA (48-MER)
著者Ker, D.S, Jenkins, H.T, Greive, S.J, Antson, A.A.
登録日2021-03-09
公開日2021-07-07
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献CryoEM structure of the Nipah virus nucleocapsid assembly.
Plos Pathog., 17, 2021
7NT5
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BU of 7nt5 by Molmil
CryoEM structure of the Nipah virus nucleocapsid single helical turn assembly
分子名称: Nucleoprotein, RNA (78-MER)
著者Ker, D.S, Jenkins, H.T, Greive, S.J, Antson, A.A.
登録日2021-03-09
公開日2021-07-07
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献CryoEM structure of the Nipah virus nucleocapsid assembly.
Plos Pathog., 17, 2021
4XP7
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BU of 4xp7 by Molmil
Crystal structure of Human tRNA dihydrouridine synthase 2
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, tRNA-dihydrouridine(20) synthase [NAD(P)+]-like
著者Whelan, F, Jenkins, H.T, Griffiths, S, Byrne, R.T, Dodson, E.J, Antson, A.A.
登録日2015-01-16
公開日2015-01-28
最終更新日2015-07-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献From bacterial to human dihydrouridine synthase: automated structure determination.
Acta Crystallogr.,Sect.D, 71, 2015
4XVN
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BU of 4xvn by Molmil
Crystal structure of the small terminase from thermophilic phage G20C
分子名称: Small terminase
著者Loredo-Varela, J, Jenkins, H.T, Chechik, M, Greive, S.J, Antson, A.A.
登録日2015-01-27
公開日2016-02-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the small terminase from thermophilic phage G20C
To Be Published
4YCP
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BU of 4ycp by Molmil
E. coli dihydrouridine synthase C (DusC) in complex with tRNATrp
分子名称: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, SULFATE ION, ...
著者Byrne, R.T, Jenkins, H.T, Peters, D.T, Whelan, F, Stowell, J, Aziz, N, Kasatsky, P, Rodnina, M.V, Koonin, E.V, Konevega, A.L, Antson, A.A.
登録日2015-02-20
公開日2015-04-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
4YCO
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BU of 4yco by Molmil
E. coli dihydrouridine synthase C (DusC) in complex with tRNAPhe
分子名称: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, MANGANESE (II) ION, ...
著者Byrne, R.T, Jenkins, H.T, Peters, D.T, Whelan, F, Stowell, J, Aziz, N, Kasatsky, P, Rodnina, M.V, Koonin, E.V, Konevega, A.L, Antson, A.A.
登録日2015-02-20
公開日2015-04-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZC3
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BU of 4zc3 by Molmil
DNA binding domain of small terminase SF6 phage
分子名称: Terminase small subunit
著者Antson, A.A, Chechik, M, Jenkins, H.T, Greive, S.J.
登録日2015-04-15
公開日2015-12-30
最終更新日2016-02-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献DNA recognition for virus assembly through multiple sequence-independent interactions with a helix-turn-helix motif.
Nucleic Acids Res., 44, 2016
7AVH
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BU of 7avh by Molmil
Streptococcal High Identity Repeats in Tandem (SHIRT) domains 3-4 from cell surface protein SGO_0707
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, LPXTG cell wall surface protein
著者Whelan, F, Jenkins, H.T, Potts, J.R.
登録日2020-11-05
公開日2021-06-09
最終更新日2021-06-16
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Periscope Proteins are variable-length regulators of bacterial cell surface interactions.
Proc.Natl.Acad.Sci.USA, 118, 2021
7AVK
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BU of 7avk by Molmil
Streptococcal High Identity Repeats in Tandem (SHIRT) domain 10 from cell surface protein SGO_0707
分子名称: LPXTG cell wall surface protein, isothiocyanate
著者Degut, C, Gilburt, J, Whelan, F, Jenkins, H.T, Potts, J.R.
登録日2020-11-05
公開日2021-06-09
最終更新日2021-06-16
実験手法X-RAY DIFFRACTION (0.82 Å)
主引用文献Periscope Proteins are variable-length regulators of bacterial cell surface interactions.
Proc.Natl.Acad.Sci.USA, 118, 2021
5M1O
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BU of 5m1o by Molmil
Crystal structure of the large terminase nuclease from thermophilic phage G20c with bound Cobalt
分子名称: COBALT (II) ION, Phage terminase large subunit
著者Xu, R.G, Jenkins, H.T, Chechik, M, Blagova, E.V, Greive, S.J, Antson, A.A.
登録日2016-10-09
公開日2016-10-26
最終更新日2017-05-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Viral genome packaging terminase cleaves DNA using the canonical RuvC-like two-metal catalysis mechanism.
Nucleic Acids Res., 45, 2017
5M1F
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BU of 5m1f by Molmil
Crystal structure of the large terminase nuclease from thermophilic phage G20c
分子名称: Phage terminase large subunit
著者Xu, R.G, Jenkins, H.T, Chechik, M, Blagova, E.V, Greive, S.J, Antson, A.A.
登録日2016-10-07
公開日2016-10-26
最終更新日2017-05-03
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Viral genome packaging terminase cleaves DNA using the canonical RuvC-like two-metal catalysis mechanism.
Nucleic Acids Res., 45, 2017

 

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