Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6AHV
DownloadVisualize
BU of 6ahv by Molmil
Crystal structure of human RPP40
Descriptor: Ribonuclease P protein subunit p40
Authors:Wu, J, Niu, S, Tan, M, Lan, P, Lei, M.
Deposit date:2018-08-20
Release date:2018-12-05
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Cryo-EM Structure of the Human Ribonuclease P Holoenzyme.
Cell, 175, 2018
6AHR
DownloadVisualize
BU of 6ahr by Molmil
Cryo-EM structure of human Ribonuclease P
Descriptor: H1 RNA, Ribonuclease P protein subunit p14, Ribonuclease P protein subunit p20, ...
Authors:Wu, J, Niu, S, Tan, M, Lan, P, Lei, M.
Deposit date:2018-08-20
Release date:2018-12-05
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.92 Å)
Cite:Cryo-EM Structure of the Human Ribonuclease P Holoenzyme.
Cell, 175, 2018
7FAY
DownloadVisualize
BU of 7fay by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with (R)-1a
Descriptor: (2~{R})-~{N}-[(1~{R})-2-(~{tert}-butylamino)-2-oxidanylidene-1-pyridin-3-yl-ethyl]-~{N}-(4-~{tert}-butylphenyl)-2-oxidanyl-propanamide, 3C-like proteinase
Authors:Zeng, R, Quan, B.X, Liu, X.L, Lei, J.
Deposit date:2021-07-08
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:An orally available M pro inhibitor is effective against wild-type SARS-CoV-2 and variants including Omicron.
Nat Microbiol, 7, 2022
7FAZ
DownloadVisualize
BU of 7faz by Molmil
Crystal structure of the SARS-CoV-2 main protease in complex with Y180
Descriptor: (2~{R})-~{N}-dibenzofuran-3-yl-~{N}-[(1~{R})-2-[[(1~{S})-1-(4-fluorophenyl)ethyl]amino]-2-oxidanylidene-1-pyridin-3-yl-ethyl]-2-oxidanyl-propanamide, 3C-like proteinase, SODIUM ION
Authors:Zeng, R, Quan, B.X, Liu, X.L, Lei, J.
Deposit date:2021-07-08
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:An orally available M pro inhibitor is effective against wild-type SARS-CoV-2 and variants including Omicron.
Nat Microbiol, 7, 2022
7MCF
DownloadVisualize
BU of 7mcf by Molmil
CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH 2-{3-(1,4-dimethyl-1H-1,2,3-triazol-5-yl)-6-fluoro-5-[(S)-(3-fluoropyridin-2-yl)(oxan-4-yl)methyl]-5H-pyrido[3,2-b]indol-7-yl}propan-2-ol
Descriptor: 2-{3-(1,4-dimethyl-1H-1,2,3-triazol-5-yl)-6-fluoro-5-[(S)-(3-fluoropyridin-2-yl)(oxan-4-yl)methyl]-5H-pyrido[3,2-b]indol-7-yl}propan-2-ol, Bromodomain-containing protein 4
Authors:Sheriff, S.
Deposit date:2021-04-02
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Development of BET inhibitors as potential treatments for cancer: A search for structural diversity.
Bioorg.Med.Chem.Lett., 44, 2021
7FBC
DownloadVisualize
BU of 7fbc by Molmil
De novo design protein D22 with MBP tag
Descriptor: Maltodextrin-binding protein,De novo design protein D22
Authors:Bin, H.
Deposit date:2021-07-09
Release date:2021-12-22
Last modified:2022-03-02
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7FBD
DownloadVisualize
BU of 7fbd by Molmil
De novo design protein D53 with MBP tag
Descriptor: Maltodextrin-binding protein,De novo design protein D53
Authors:Bin, H.
Deposit date:2021-07-09
Release date:2021-12-22
Last modified:2022-03-02
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7FBB
DownloadVisualize
BU of 7fbb by Molmil
De novo design protein D12 with MBP tag
Descriptor: Maltodextrin-binding protein,de novo designed protein D12
Authors:Bin, H.
Deposit date:2021-07-09
Release date:2021-12-22
Last modified:2022-03-02
Method:X-RAY DIFFRACTION (2.307 Å)
Cite:A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7F8L
DownloadVisualize
BU of 7f8l by Molmil
Crystal structure of Bat coronavirus RaTG13 ORF8 accessory protein
Descriptor: CALCIUM ION, Nonstructural protein NS8
Authors:Chen, X, Zhou, Z, Chen, S.
Deposit date:2021-07-02
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.762 Å)
Cite:Crystal Structures of Bat and Human Coronavirus ORF8 Protein Ig-Like Domain Provide Insights Into the Diversity of Immune Responses.
Front Immunol, 12, 2021
7F5F
DownloadVisualize
BU of 7f5f by Molmil
SARS-CoV-2 ORF8 S84
Descriptor: CALCIUM ION, ORF8 protein
Authors:Chen, S, Zhou, Z, Chen, X.
Deposit date:2021-06-22
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal Structures of Bat and Human Coronavirus ORF8 Protein Ig-Like Domain Provide Insights Into the Diversity of Immune Responses.
Front Immunol, 12, 2021
7DXL
DownloadVisualize
BU of 7dxl by Molmil
Fragment-based Lead Discovery of Indazole-based Compounds as AXL Kinase Inhibitors
Descriptor: 3-[4-[6-chloranyl-5-[[(3R)-pyrrolidin-3-yl]amino]-1H-indazol-3-yl]pyrazol-1-yl]benzenecarbonitrile, Tyrosine-protein kinase Mer
Authors:Anantharajan, J, Baburajendran, N.
Deposit date:2021-01-19
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.146 Å)
Cite:Fragment-based lead discovery of indazole-based compounds as AXL kinase inhibitors.
Bioorg.Med.Chem., 49, 2021
6K2U
DownloadVisualize
BU of 6k2u by Molmil
Crystal structure of Thr66 ADP-ribosylated ubiquitin
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, MAGNESIUM ION, Polyubiquitin-C, ...
Authors:Wang, X, Zhou, Y, Zhu, Y.
Deposit date:2019-05-15
Release date:2020-03-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.554 Å)
Cite:Threonine ADP-Ribosylation of Ubiquitin by a Bacterial Effector Family Blocks Host Ubiquitination.
Mol.Cell, 78, 2020
1HTV
DownloadVisualize
BU of 1htv by Molmil
CRYSTAL STRUCTURE OF DESTRIPEPTIDE (B28-B30) INSULIN
Descriptor: INSULIN, ZINC ION
Authors:Ye, J, Chang, W, Liang, D.
Deposit date:2001-01-01
Release date:2001-05-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of destripeptide (B28-B30) insulin: implications for insulin dissociation.
Biochim.Biophys.Acta, 1547, 2001
2H4N
DownloadVisualize
BU of 2h4n by Molmil
H94N CARBONIC ANHYDRASE II COMPLEXED WITH ACETAZOLAMIDE
Descriptor: 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE, CARBONIC ANHYDRASE II, ZINC ION
Authors:Lesburg, C.A, Christianson, D.W.
Deposit date:1997-05-29
Release date:1997-09-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Histidine --> carboxamide ligand substitutions in the zinc binding site of carbonic anhydrase II alter metal coordination geometry but retain catalytic activity.
Biochemistry, 36, 1997
2I6W
DownloadVisualize
BU of 2i6w by Molmil
Crystal structure of the multidrug efflux transporter AcrB
Descriptor: Acriflavine resistance protein B
Authors:Das, D, Xu, Q.S, Kim, S.H.
Deposit date:2006-08-29
Release date:2007-05-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the multidrug efflux transporter AcrB at 3.1A resolution reveals the N-terminal region with conserved amino acids.
J.Struct.Biol., 158, 2007
6IW2
DownloadVisualize
BU of 6iw2 by Molmil
Crystal structure of 5A ScFv in complex with YFV-17D sE in prefusion state
Descriptor: Envelope protein E, Heavy chain of monoclonal antibody 5A, Light chain of monoclonal antibody 5A
Authors:Lu, X.S, Xiao, H.X, Li, S.H, Pang, X.F.
Deposit date:2018-12-04
Release date:2019-02-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Double Lock of a Human Neutralizing and Protective Monoclonal Antibody Targeting the Yellow Fever Virus Envelope.
Cell Rep, 26, 2019
6IW5
DownloadVisualize
BU of 6iw5 by Molmil
Crystal structure of YFV-China sE in prefusion state
Descriptor: Envelope protein
Authors:Lu, X.S, Xiao, H.X, Li, S.H, Pang, X.F.
Deposit date:2018-12-04
Release date:2019-02-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Double Lock of a Human Neutralizing and Protective Monoclonal Antibody Targeting the Yellow Fever Virus Envelope.
Cell Rep, 26, 2019
6IVZ
DownloadVisualize
BU of 6ivz by Molmil
Crystal structure of 5A ScFv complexed with YFV-China sE in postfusion state
Descriptor: Envelope protein, Heavy chain of monoclonal antibody 5A, Light chain of monoclonal antibody 5A
Authors:Lu, X.S, Xiao, H.X, Li, S.H, Pang, X.F.
Deposit date:2018-12-04
Release date:2019-02-13
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Double Lock of a Human Neutralizing and Protective Monoclonal Antibody Targeting the Yellow Fever Virus Envelope.
Cell Rep, 26, 2019
6IW0
DownloadVisualize
BU of 6iw0 by Molmil
Crystal structure of 5A ScFv in complex with YFV-17D sE in postfusion state
Descriptor: Envelope protein E, Heavy chain of monoclonal antibody 5A, Light chain of monoclonal antibody 5A
Authors:Lu, X.S, Xiao, H.X, Li, S.H, Pang, X.F.
Deposit date:2018-12-04
Release date:2019-02-13
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Double Lock of a Human Neutralizing and Protective Monoclonal Antibody Targeting the Yellow Fever Virus Envelope.
Cell Rep, 26, 2019
6IW1
DownloadVisualize
BU of 6iw1 by Molmil
Crystal structure of YFV-17D sE in postfusion state
Descriptor: Envelope protein E
Authors:Lu, X.S, Xiao, H.X, Li, S.H, Pang, X.F.
Deposit date:2018-12-04
Release date:2019-02-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Double Lock of a Human Neutralizing and Protective Monoclonal Antibody Targeting the Yellow Fever Virus Envelope.
Cell Rep, 26, 2019
6IW4
DownloadVisualize
BU of 6iw4 by Molmil
Crystal structure of YFV-17D sE in prefusion state
Descriptor: Envelope protein E
Authors:Lu, X.S, Xiao, H.X, Li, S.H, Pang, X.F.
Deposit date:2018-12-04
Release date:2019-02-13
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Double Lock of a Human Neutralizing and Protective Monoclonal Antibody Targeting the Yellow Fever Virus Envelope.
Cell Rep, 26, 2019
6IWT
DownloadVisualize
BU of 6iwt by Molmil
Crystal structure of methyltransferase COMT-S in P. praeruptorum
Descriptor: DI(HYDROXYETHYL)ETHER, Pmethyltransferase pCOMT-S
Authors:Wang, N.N, Zeng, Z.X.
Deposit date:2018-12-06
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:The Molecular and Structural Basis ofO-methylation Reaction in Coumarin Biosynthesis inPeucedanum praeruptorumDunn.
Int J Mol Sci, 20, 2019
6J9O
DownloadVisualize
BU of 6j9o by Molmil
Crystal structure of a free scFv molecule from a group 2 influenza A viruses HA binding antibody AF4H1K1
Descriptor: Heavy chain of AF4H1K1 scFv, Light chain of AF4H1K1 scFv
Authors:Xiao, H.X, Qi, J.X, Gao, F.G.
Deposit date:2019-01-23
Release date:2020-01-29
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.397 Å)
Cite:Light chain modulates heavy chain conformation to change protection profile of monoclonal antibodies against influenza A viruses.
Cell Discov, 5, 2019
6KHO
DownloadVisualize
BU of 6kho by Molmil
Crystal structure of Oryza sativa TDC with PLP
Descriptor: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhou, Y.Z, Liao, L.J, Liu, X.K, Guo, Y, Zhao, Y.C, Zeng, Z.X.
Deposit date:2019-07-16
Release date:2020-07-15
Method:X-RAY DIFFRACTION (1.972 Å)
Cite:Crystal structure ofOryza sativaTDC reveals the substrate specificity for TDC-mediated melatonin biosynthesis.
J Adv Res, 24, 2020
6KHN
DownloadVisualize
BU of 6khn by Molmil
Crystal structure of Oryza sativa TDC with PLP and SEROTONIN
Descriptor: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhou, Y.Z, Liao, L.J, Liu, X.K, Guo, Y, Zhao, Y.C, Zeng, Z.X.
Deposit date:2019-07-16
Release date:2020-07-15
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:Crystal structure ofOryza sativaTDC reveals the substrate specificity for TDC-mediated melatonin biosynthesis.
J Adv Res, 24, 2020

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon