1DPS
| THE CRYSTAL STRUCTURE OF DPS, A FERRITIN HOMOLOG THAT BINDS AND PROTECTS DNA | Descriptor: | DPS, SODIUM ION | Authors: | Grant, R.A, Filman, D.J, Finkel, S.E, Kolter, R, Hogle, J.M. | Deposit date: | 1998-02-23 | Release date: | 1998-09-16 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | The crystal structure of Dps, a ferritin homolog that binds and protects DNA. Nat.Struct.Biol., 5, 1998
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1FPT
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1SEL
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1T6L
| Crystal Structure of the Human Cytomegalovirus DNA Polymerase Subunit, UL44 | Descriptor: | DNA polymerase processivity factor | Authors: | Appleton, B.A, Loregian, A, Filman, D.J, Coen, D.M, Hogle, J.M. | Deposit date: | 2004-05-06 | Release date: | 2004-08-10 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | The Cytomegalovirus DNA Polymerase Subunit UL44 Forms a C Clamp-Shaped Dimer. Mol.Cell, 15, 2004
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1XOK
| crystal structure of alfalfa mosaic virus RNA 3'UTR in complex with coat protein N terminal peptide | Descriptor: | BROMIDE ION, Coat protein, alfalfa mosaic virus RNA 3' UTR | Authors: | Guogas, L.M, Filman, D.J, Hogle, J.M, Gehrke, L. | Deposit date: | 2004-10-06 | Release date: | 2005-01-04 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Cofolding organizes alfalfa mosaic virus RNA and coat protein for replication. Science, 306, 2004
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1XYR
| Poliovirus 135S cell entry intermediate | Descriptor: | Genome polyprotein, Coat protein VP1, Coat protein VP2, ... | Authors: | Bubeck, D, Filman, D.J, Cheng, N, Steven, A.C, Hogle, J.M, Belnap, D.M. | Deposit date: | 2004-11-10 | Release date: | 2005-08-02 | Last modified: | 2024-02-14 | Method: | ELECTRON MICROSCOPY (11 Å) | Cite: | The structure of the poliovirus 135S cell entry intermediate at 10-angstrom resolution reveals the location of an externalized polypeptide that binds to membranes. J.Virol., 79, 2005
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3ZX8
| Cryo-EM reconstruction of native and expanded Turnip Crinkle virus | Descriptor: | CAPSID PROTEIN | Authors: | Bakker, S.E, Robottom, J, Hogle, J.M, Maeda, A, Pearson, A.R, Stockley, P.G, Ranson, N.A, Harrison, S.C. | Deposit date: | 2011-08-08 | Release date: | 2012-07-18 | Last modified: | 2018-10-03 | Method: | ELECTRON MICROSCOPY (11.5 Å) | Cite: | Isolation of an Asymmetric RNA Uncoating Intermediate for a Single-Stranded RNA Plant Virus. J.Mol.Biol., 417, 2012
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3I2M
| The Crystal Structure of PF-8, the DNA Polymerase Accessory Subunit from Kaposi s Sarcoma-Associated Herpesvirus | Descriptor: | ORF59 | Authors: | Baltz, J.L, Filman, D.J, Ciustea, M, Silverman, J.E.Y, Lautenschlager, C.L, Coen, D.M, Ricciardi, R.P, Hogle, J.M. | Deposit date: | 2009-06-29 | Release date: | 2010-05-12 | Last modified: | 2021-10-13 | Method: | X-RAY DIFFRACTION (2.81 Å) | Cite: | The crystal structure of PF-8, the DNA polymerase accessory subunit from Kaposi's sarcoma-associated herpesvirus. J.Virol., 83, 2009
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3HSL
| The Crystal Structure of PF-8, the DNA Polymerase Accessory Subunit from Kaposi's Sarcoma-Associated Herpesvirus | Descriptor: | ORF59 | Authors: | Baltz, J.L, Filman, D.J, Ciustea, M, Silverman, J.E.Y, Lautenschlager, C.L, Coen, D.M, Ricciardi, R.P, Hogle, J.M. | Deposit date: | 2009-06-10 | Release date: | 2009-11-24 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | The crystal structure of PF-8, the DNA polymerase accessory subunit from Kaposi's sarcoma-associated herpesvirus. J.Virol., 83, 2009
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3IYB
| Poliovirus early RNA-release intermediate | Descriptor: | Genome polyprotein, Precursor polyprotein, VP1 core | Authors: | Levy, H.C, Bostina, M, Filman, D.J, Hogle, J.M. | Deposit date: | 2009-07-21 | Release date: | 2010-03-16 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (10 Å) | Cite: | Catching a virus in the act of RNA release: a novel poliovirus uncoating intermediate characterized by cryo-electron microscopy. J.Virol., 84, 2010
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3IYC
| Poliovirus late RNA-release intermediate | Descriptor: | Capsid protein VP1, Capsid protein VP2, Genome polyprotein, ... | Authors: | Levy, H.C, Bostina, M, Filman, D.J, Hogle, J.M. | Deposit date: | 2009-07-21 | Release date: | 2010-03-16 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (10 Å) | Cite: | Catching a virus in the act of RNA release: a novel poliovirus uncoating intermediate characterized by cryo-electron microscopy. J.Virol., 84, 2010
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3J48
| Cryo-EM structure of Poliovirus 135S particles | Descriptor: | Protein VP1, Protein VP2, Protein VP3 | Authors: | Butan, C, Fiman, D.J, Hogle, J.M. | Deposit date: | 2013-06-28 | Release date: | 2013-12-04 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (5.5 Å) | Cite: | Cryo-Electron Microscopy Reconstruction Shows Poliovirus 135S Particles Poised for Membrane Interaction and RNA Release. J.Virol., 88, 2014
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3JBE
| Complex of poliovirus with VHH PVSS8A | Descriptor: | Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ... | Authors: | Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M. | Deposit date: | 2015-08-26 | Release date: | 2016-01-27 | Last modified: | 2022-12-21 | Method: | ELECTRON MICROSCOPY (4.2 Å) | Cite: | Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site. J.Virol., 90, 2016
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3J3P
| Conformational Shift of a Major Poliovirus Antigen Confirmed by Immuno-Cryogenic Electron Microscopy: 135S Poliovirus and C3-Fab Complex | Descriptor: | C3 antibody, heavy chain, light chain, ... | Authors: | Lin, J, Cheng, N, Hogle, J.M, Steven, A.C, Belnap, D.M. | Deposit date: | 2013-04-10 | Release date: | 2013-07-03 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (9.1 Å) | Cite: | Conformational shift of a major poliovirus antigen confirmed by immuno-cryogenic electron microscopy. J.Immunol., 191, 2013
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3J3O
| Conformational Shift of a Major Poliovirus Antigen Confirmed by Immuno-Cryogenic Electron Microscopy: 160S Poliovirus and C3-Fab Complex | Descriptor: | C3 antibody, heavy chain, light chain, ... | Authors: | Lin, J, Cheng, N, Hogle, J.M, Steven, A.C, Belnap, D.M. | Deposit date: | 2013-04-10 | Release date: | 2013-07-03 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (11.1 Å) | Cite: | Conformational shift of a major poliovirus antigen confirmed by immuno-cryogenic electron microscopy. J.Immunol., 191, 2013
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3J8F
| Cryo-EM reconstruction of poliovirus-receptor complex | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid protein VP1, ... | Authors: | Strauss, M, Filman, D.J, Belnap, D.M, Cheng, N, Noel, R.T, Hogle, J.M. | Deposit date: | 2014-10-20 | Release date: | 2015-02-11 | Last modified: | 2022-12-21 | Method: | ELECTRON MICROSCOPY (3.7 Å) | Cite: | Nectin-Like Interactions between Poliovirus and Its Receptor Trigger Conformational Changes Associated with Cell Entry. J.Virol., 89, 2015
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3JBF
| Complex of poliovirus with VHH PVSP19B | Descriptor: | Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ... | Authors: | Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M. | Deposit date: | 2015-08-26 | Release date: | 2016-01-27 | Last modified: | 2022-12-21 | Method: | ELECTRON MICROSCOPY (4.6 Å) | Cite: | Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site. J.Virol., 90, 2016
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3JBD
| Complex of poliovirus with VHH PVSP6A | Descriptor: | Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ... | Authors: | Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M. | Deposit date: | 2015-08-26 | Release date: | 2016-01-27 | Last modified: | 2022-12-21 | Method: | ELECTRON MICROSCOPY (4.7 Å) | Cite: | Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site. J.Virol., 90, 2016
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3JBC
| Complex of Poliovirus with VHH PVSP29F | Descriptor: | Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ... | Authors: | Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M. | Deposit date: | 2015-08-26 | Release date: | 2016-01-27 | Last modified: | 2022-12-21 | Method: | ELECTRON MICROSCOPY (5.6 Å) | Cite: | Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site. J.Virol., 90, 2016
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3JBG
| Complex of poliovirus with VHH PVSS21E | Descriptor: | Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ... | Authors: | Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M. | Deposit date: | 2015-08-26 | Release date: | 2016-01-27 | Last modified: | 2022-12-21 | Method: | ELECTRON MICROSCOPY (3.8 Å) | Cite: | Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site. J.Virol., 90, 2016
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3J9F
| Poliovirus complexed with soluble, deglycosylated poliovirus receptor (Pvr) at 4 degrees C | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PALMITIC ACID, ... | Authors: | Strauss, M, Filman, D.J, Belnap, D.M, Cheng, N, Noel, R.T, Hogle, J.M. | Deposit date: | 2015-01-15 | Release date: | 2015-02-11 | Last modified: | 2022-12-21 | Method: | ELECTRON MICROSCOPY (9 Å) | Cite: | Nectin-Like Interactions between Poliovirus and Its Receptor Trigger Conformational Changes Associated with Cell Entry. J.Virol., 89, 2015
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6RJF
| Echovirus 1 intact particle | Descriptor: | PALMITIC ACID, VP1, VP2, ... | Authors: | Domanska, A, Ruokolainen, V.P, Pelliccia, M, Laajala, M.A, Marjomaki, V.S, Butcher, S.J. | Deposit date: | 2019-04-26 | Release date: | 2019-06-12 | Last modified: | 2019-08-21 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Extracellular Albumin and Endosomal Ions Prime Enterovirus Particles for Uncoating That Can Be Prevented by Fatty Acid Saturation. J.Virol., 93, 2019
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2AIV
| Multiple conformations in the ligand-binding site of the yeast nuclear pore targeting domain of NUP116P | Descriptor: | fragment of Nucleoporin NUP116/NSP116 | Authors: | Robinson, M.A, Park, S, Sun, Z.-Y.J, Silver, P, Wagner, G, Hogle, J. | Deposit date: | 2005-08-01 | Release date: | 2005-08-16 | Last modified: | 2018-01-24 | Method: | SOLUTION NMR | Cite: | Multiple Conformations in the Ligand-binding Site of the Yeast Nuclear Pore-targeting Domain of Nup116p J.Biol.Chem., 280, 2005
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1EAH
| PV2L COMPLEXED WITH ANTIVIRAL AGENT SCH48973 | Descriptor: | 1[2-CHLORO-4-METHOXY-PHENYL-OXYMETHYL]-4-[2,6-DICHLORO-PHENYL-OXYMETHYL]-BENZENE, MYRISTIC ACID, POLIOVIRUS TYPE 2 COAT PROTEINS VP1 TO VP4 | Authors: | Lentz, K, Arnold, E. | Deposit date: | 1997-07-22 | Release date: | 1998-09-16 | Last modified: | 2023-04-19 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structure of poliovirus type 2 Lansing complexed with antiviral agent SCH48973: comparison of the structural and biological properties of three poliovirus serotypes. Structure, 5, 1997
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2FJC
| Crystal structure of antigen TpF1 from Treponema pallidum | Descriptor: | Antigen TpF1, FE (III) ION | Authors: | Thumiger, A, Polenghi, A, Papinutto, E, Battistutta, R, Montecucco, C, Zanotti, G. | Deposit date: | 2006-01-02 | Release date: | 2006-01-10 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Crystal structure of antigen TpF1 from Treponema pallidum. Proteins, 62, 2006
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