6Y16
 
 | | CRYSTAL STRUCTURE OF TMARGBP DOMAIN 1 IN COMPLEX WITH THE GUANIDINIUM ION | | Descriptor: | 1,2-ETHANEDIOL, Amino acid ABC transporter, periplasmic amino acid-binding protein,Amino acid ABC transporter, ... | | Authors: | Ruggiero, A, Balasco, N, Smaldone, G, Graziano, G, Vitagliano, L. | | Deposit date: | 2020-02-11 | | Release date: | 2020-07-15 | | Last modified: | 2024-01-24 | | Method: | X-RAY DIFFRACTION (1.7 Å) | | Cite: | Guanidinium binding to proteins: The intriguing effects on the D1 and D2 domains of Thermotoga maritima Arginine Binding Protein and a comprehensive analysis of the Protein Data Bank.
Int.J.Biol.Macromol., 163, 2020
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9BD1
 | | beta/alpha1 region of ApoB 100 | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Apolipoprotein B-100 | | Authors: | Dearborn, A.D, Reimund, M, Graziano, G, Lei, H, Kumar, A, Neufeld, E.B, Remaley, A.T, Marcotrigiano, J. | | Deposit date: | 2024-04-10 | | Release date: | 2024-12-25 | | Last modified: | 2025-03-05 | | Method: | ELECTRON MICROSCOPY (5.4 Å) | | Cite: | Structure of apolipoprotein B100 bound to the low-density lipoprotein receptor.
Nature, 638, 2025
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9BD8
 | | ApoB 100 beta barrel bound to LDLR beta propeller | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Apolipoprotein B-100, Low-density lipoprotein receptor | | Authors: | Dearborn, A.D, Reimund, M, Graziano, G, Lei, H, Kumar, A, Neufeld, E.B, Remaley, A.T, Marcotrigiano, J. | | Deposit date: | 2024-04-11 | | Release date: | 2024-12-25 | | Last modified: | 2025-03-05 | | Method: | ELECTRON MICROSCOPY (4.8 Å) | | Cite: | Structure of apolipoprotein B100 bound to the low-density lipoprotein receptor.
Nature, 638, 2025
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9BDE
 | | Middle Region of Apolipoprotein B 100 bound to Low Density Lipoprotein Receptor | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, ApoB100 nanobody 4, Apolipoprotein B 100, ... | | Authors: | Dearborn, A.D, Reimund, M, Graziano, G, Lei, H, Kumar, A, Neufeld, E.B, Remaley, A.T, Marcotrigiano, J. | | Deposit date: | 2024-04-11 | | Release date: | 2024-12-25 | | Last modified: | 2025-03-05 | | Method: | ELECTRON MICROSCOPY (4.18 Å) | | Cite: | Structure of apolipoprotein B100 bound to the low-density lipoprotein receptor.
Nature, 638, 2025
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9BDT
 | | Apolipoprotein B 100 bound to LDL receptor and legobody | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ApoB100 nanobody 4, ... | | Authors: | Dearborn, A.D, Reimund, M, Graziano, G, Lei, H, Kumar, A, Neufeld, E.B, Remaley, A.T, Marcotrigiano, J. | | Deposit date: | 2024-04-12 | | Release date: | 2024-12-25 | | Last modified: | 2025-03-05 | | Method: | ELECTRON MICROSCOPY (5.4 Å) | | Cite: | Structure of apolipoprotein B100 bound to the low-density lipoprotein receptor.
Nature, 638, 2025
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9COO
 | | Nanobody 4 bound to Apolipoprotein B 100 | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, ApoB100 nanobody 4, Apolipoprotein B 100, ... | | Authors: | Dearborn, A.D, Kumar, A, Reimund, M, Graziano, G, Lei, H, Neufeld, E.B, Remaley, A.T, Marcotrigiano, J. | | Deposit date: | 2024-07-17 | | Release date: | 2024-12-25 | | Last modified: | 2025-03-05 | | Method: | ELECTRON MICROSCOPY (3.73 Å) | | Cite: | Structure of apolipoprotein B100 bound to the low-density lipoprotein receptor.
Nature, 638, 2025
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6Q3U
 | | Gly52Ala mutant of arginine-bound ArgBP from T. maritima | | Descriptor: | ARGININE, Amino acid ABC transporter, periplasmic amino acid-binding protein, ... | | Authors: | Balasco, N, Smaldone, G, Ruggiero, A, Vitagliano, L. | | Deposit date: | 2018-12-04 | | Release date: | 2019-05-08 | | Last modified: | 2024-01-24 | | Method: | X-RAY DIFFRACTION (1.64 Å) | | Cite: | The characterization of Thermotoga maritima Arginine Binding Protein variants demonstrates that minimal local strains have an important impact on protein stability.
Sci Rep, 9, 2019
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6GPD
 | | Crystal structure of the ligand-free form of domain 1 from TmArgBP | | Descriptor: | Amino acid ABC transporter, periplasmic amino acid-binding protein,Amino acid ABC transporter, periplasmic amino acid-binding protein | | Authors: | Smaldone, G, Balasco, N, Ruggiero, A, Berisio, R, Vitagliano, L. | | Deposit date: | 2018-06-05 | | Release date: | 2018-08-15 | | Last modified: | 2024-01-17 | | Method: | X-RAY DIFFRACTION (1.75 Å) | | Cite: | Domain communication in Thermotoga maritima Arginine Binding Protein unraveled through protein dissection.
Int. J. Biol. Macromol., 119, 2018
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6GPC
 | | Crystal structure of the arginine-bound form of domain 1 from TmArgBP | | Descriptor: | ARGININE, Amino acid ABC transporter, periplasmic amino acid-binding protein,Amino acid ABC transporter, ... | | Authors: | Smaldone, G, Balasco, N, Ruggiero, A, Berisio, R, Vitagliano, L. | | Deposit date: | 2018-06-05 | | Release date: | 2018-08-15 | | Last modified: | 2024-01-17 | | Method: | X-RAY DIFFRACTION (1.75 Å) | | Cite: | Domain communication in Thermotoga maritima Arginine Binding Protein unraveled through protein dissection.
Int. J. Biol. Macromol., 119, 2018
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6GPM
 | | Crystal structure of domain 2 from TmArgBP | | Descriptor: | Amino acid ABC transporter, periplasmic amino acid-binding protein | | Authors: | Smaldone, G, Balasco, N, Ruggiero, A, Berisio, R, Vitagliano, L. | | Deposit date: | 2018-06-06 | | Release date: | 2018-08-15 | | Last modified: | 2024-01-17 | | Method: | X-RAY DIFFRACTION (1.73 Å) | | Cite: | Domain communication in Thermotoga maritima Arginine Binding Protein unraveled through protein dissection.
Int. J. Biol. Macromol., 119, 2018
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1B4O
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