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2HVW
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BU of 2hvw by Molmil
Crystal structure of dCMP deaminase from Streptococcus mutans
Descriptor: 1,4-DIETHYLENE DIOXIDE, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 3,4-DIHYDRO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, ...
Authors:Hou, H.F, Gao, Z.Q, Li, L.F, Liang, Y.H, Su, X.D, Dong, Y.H.
Deposit date:2006-07-31
Release date:2007-09-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Crystal structures of Streptococcus mutans 2'-deoxycytidylate deaminase and its complex with substrate analog and allosteric regulator dCTP x Mg2+.
J.Mol.Biol., 377, 2008
4MMG
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BU of 4mmg by Molmil
crystal structure of YafQ mutant H87Q from E.coli
Descriptor: SULFATE ION, mRNA interferase YafQ
Authors:Liang, Y.J, Gao, Z.Q, Liu, Q.S, Dong, Y.H.
Deposit date:2013-09-09
Release date:2014-06-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Functional Characterization of Escherichia coli Toxin-Antitoxin Complex DinJ-YafQ
J.Biol.Chem., 289, 2014
4ML2
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BU of 4ml2 by Molmil
Crystal structure of wild-type YafQ
Descriptor: SULFATE ION, mRNA interferase YafQ
Authors:Liang, Y.J, Gao, Z.Q, Liu, Q.S, Dong, Y.H.
Deposit date:2013-09-06
Release date:2014-06-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Functional Characterization of Escherichia coli Toxin-Antitoxin Complex DinJ-YafQ
J.Biol.Chem., 289, 2014
4ML0
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BU of 4ml0 by Molmil
Crystal structure of E.coli DinJ-YafQ complex
Descriptor: Predicted antitoxin of YafQ-DinJ toxin-antitoxin system, Predicted toxin of the YafQ-DinJ toxin-antitoxin system, SULFATE ION
Authors:Liang, Y.J, Gao, Z.Q, Liu, Q.S, Dong, Y.H.
Deposit date:2013-09-06
Release date:2014-06-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Functional Characterization of Escherichia coli Toxin-Antitoxin Complex DinJ-YafQ
J.Biol.Chem., 289, 2014
4NK4
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BU of 4nk4 by Molmil
Crystal structure of FabI from Candidatus Liberibacter asiaticus
Descriptor: DI(HYDROXYETHYL)ETHER, Enoyl-[acyl-carrier-protein] reductase [NADH]
Authors:Jiang, L, Gao, Z.Q, Dong, Y.H.
Deposit date:2013-11-12
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures and kinetic properties of enoyl-acyl carrier protein reductase I from Candidatus Liberibacter asiaticus.
Protein Sci., 23, 2014
4JKZ
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BU of 4jkz by Molmil
Crystal structure of ms6564 from mycobacterium smegmatis
Descriptor: Transcriptional regulator, TetR family
Authors:Yang, S.F, Gao, Z.Q, He, Z.G, Dong, Y.H.
Deposit date:2013-03-12
Release date:2013-06-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for interaction between Mycobacterium smegmatis Ms6564, a TetR family master regulator, and its target DNA.
J.Biol.Chem., 288, 2013
4JL3
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BU of 4jl3 by Molmil
Crystal structure of ms6564-dna complex
Descriptor: DNA (31-MER), Transcriptional regulator, TetR family
Authors:Yang, S.F, Gao, Z.Q, He, Z.G, Dong, Y.H.
Deposit date:2013-03-12
Release date:2013-06-26
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for interaction between Mycobacterium smegmatis Ms6564, a TetR family master regulator, and its target DNA.
J.Biol.Chem., 288, 2013
6JQ4
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BU of 6jq4 by Molmil
HIGA Escherichia coli-K12
Descriptor: Antitoxin HigA
Authors:She, Z, Xu, B.S.
Deposit date:2019-03-28
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational changes of antitoxin HigA from Escherichia coli str. K-12 upon binding of its cognate toxin HigB reveal a new regulation mechanism in toxin-antitoxin systems.
Biochem.Biophys.Res.Commun., 514, 2019
7ETR
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BU of 7etr by Molmil
Crystal structure of SO_1444-SO_1445 complex from Shewanella oneidensis
Descriptor: Toxin module of toxin-antitoxin system RelE/StbE family, Transcriptional regulator CopG family
Authors:Zhou, J, Zhang, H.
Deposit date:2021-05-13
Release date:2022-03-23
Method:X-RAY DIFFRACTION (3.804 Å)
Cite:Insights into the Neutralization and DNA Binding of Toxin-Antitoxin System ParE SO-CopA SO by Structure-Function Studies.
Microorganisms, 9, 2021
7D8U
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BU of 7d8u by Molmil
Crystal structure of the C-terminal domain of pNP868R from African swine fever virus
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, GTP--RNA guanylyltransferase, ...
Authors:Du, X, Geng, Z, Zhang, H.
Deposit date:2020-10-10
Release date:2020-12-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and Biochemical Characteristic of the Methyltransferase (MTase) Domain of RNA Capping Enzyme from African Swine Fever Virus.
J.Virol., 2020
7X32
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BU of 7x32 by Molmil
Crystal structure of E. coli NfsB in complex with berberine
Descriptor: BERBERINE, DIMETHYL SULFOXIDE, Dihydropteridine reductase, ...
Authors:Zhang, H, Wen, H.Y.
Deposit date:2022-02-27
Release date:2022-10-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.829 Å)
Cite:Structural basis for the transformation of the traditional medicine berberine by bacterial nitroreductase.
Acta Crystallogr D Struct Biol, 78, 2022
5YEP
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BU of 5yep by Molmil
Crystal structure of SO_3166-SO_3165 from Shewanella oneidensis
Descriptor: Toxin-antitoxin system antidote Mnt family, Toxin-antitoxin system toxin HepN family
Authors:Jia, X, Gao, Z.Q, Zhang, H, Dong, Y.H.
Deposit date:2017-09-19
Release date:2018-03-28
Last modified:2019-04-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure-function analyses reveal the molecular architecture and neutralization mechanism of a bacterial HEPN-MNT toxin-antitoxin system.
J. Biol. Chem., 293, 2018
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PDB entries from 2024-05-01

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