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5CWI
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BU of 5cwi by Molmil
Crystal structure of de novo designed helical repeat protein DHR18
分子名称: Designed helical repeat protein, PHOSPHATE ION
著者Bhabha, G, Ekiert, D.C.
登録日2015-07-28
公開日2015-12-16
最終更新日2016-01-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Exploring the repeat protein universe through computational protein design.
Nature, 528, 2015
4M6L
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BU of 4m6l by Molmil
Crystal structure of human dihydrofolate reductase (DHFR) bound to NADP+ and 5,10-dideazatetrahydrofolic acid
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Dihydrofolate reductase, N-(4-{2-[(6S)-2-amino-4-oxo-1,4,5,6,7,8-hexahydropyrido[2,3-d]pyrimidin-6-yl]ethyl}benzoyl)-L-glutamic acid, ...
著者Bhabha, G, Ekiert, D.C, Wright, P.E, Wilson, I.A.
登録日2013-08-09
公開日2013-09-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Divergent evolution of protein conformational dynamics in dihydrofolate reductase.
Nat.Struct.Mol.Biol., 20, 2013
4M6J
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BU of 4m6j by Molmil
Crystal structure of human dihydrofolate reductase (DHFR) bound to NADPH
分子名称: Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Bhabha, G, Ekiert, D.C, Wright, P.E, Wilson, I.A.
登録日2013-08-09
公開日2013-09-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.201 Å)
主引用文献Divergent evolution of protein conformational dynamics in dihydrofolate reductase.
Nat.Struct.Mol.Biol., 20, 2013
4M6K
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BU of 4m6k by Molmil
Crystal structure of human dihydrofolate reductase (DHFR) bound to NADP+ and folate
分子名称: Dihydrofolate reductase, FOLIC ACID, GLYCEROL, ...
著者Bhabha, G, Ekiert, D.C, Wright, P.E, Wilson, I.A.
登録日2013-08-09
公開日2013-09-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.396 Å)
主引用文献Divergent evolution of protein conformational dynamics in dihydrofolate reductase.
Nat.Struct.Mol.Biol., 20, 2013
4F6N
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BU of 4f6n by Molmil
Crystal structure of Kaiso zinc finger DNA binding protein in complex with methylated CpG site DNA
分子名称: DNA (5'-D(*CP*GP*TP*AP*TP*AP*GP*AP*(5CM)P*GP*(5CM)P*GP*GP*TP*GP*AP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*TP*CP*AP*CP*(5CM)P*GP*(5CM)P*GP*TP*CP*TP*AP*TP*AP*CP*G)-3'), GLYCEROL, ...
著者Buck-Koehntop, B.A, Stanfield, R.L, Ekiert, D.C, Martinez-Yamout, M.A, Dyson, H.J, Wilson, I.A, Wright, P.E.
登録日2012-05-15
公開日2012-09-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Molecular basis for recognition of methylated and specific DNA sequences by the zinc finger protein Kaiso.
Proc.Natl.Acad.Sci.USA, 109, 2012
4F6M
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BU of 4f6m by Molmil
Crystal structure of Kaiso zinc finger DNA binding domain in complex with Kaiso binding site DNA
分子名称: DNA (5'-D(*CP*GP*TP*TP*AP*TP*TP*GP*GP*CP*AP*GP*GP*AP*AP*GP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*CP*TP*TP*CP*CP*TP*GP*CP*CP*AP*AP*TP*AP*AP*CP*G)-3'), Transcriptional regulator Kaiso, ...
著者Buck-Koehntop, B.A, Stanfield, R.L, Ekiert, D.C, Martinez-Yamout, M.A, Dyson, H.J, Wilson, I.A, Wright, P.E.
登録日2012-05-15
公開日2012-09-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular basis for recognition of methylated and specific DNA sequences by the zinc finger protein Kaiso.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GMS
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BU of 4gms by Molmil
Crystal structure of heterosubtypic Fab S139/1 in complex with influenza A H3 hemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab S139/1 heavy chain, ...
著者Lee, P.S, Ekiert, D.C, Wilson, I.A.
登録日2012-08-16
公開日2012-10-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Heterosubtypic antibody recognition of the influenza virus hemagglutinin receptor binding site enhanced by avidity.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GMT
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BU of 4gmt by Molmil
Crystal structure of heterosubtypic Fab S139/1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab S139/1 heavy chain, ...
著者Lee, P.S, Ekiert, D.C, Wilson, I.A.
登録日2012-08-16
公開日2012-10-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Heterosubtypic antibody recognition of the influenza virus hemagglutinin receptor binding site enhanced by avidity.
Proc.Natl.Acad.Sci.USA, 109, 2012
6WYR
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BU of 6wyr by Molmil
Crystal structure of anti-Muscle Specific Kinase (MuSK) Fab, MuSK1A
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MuSK1A heavy chain, ...
著者Vieni, C, Ekiert, D.
登録日2020-05-13
公開日2020-07-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Affinity maturation is required for pathogenic monovalent IgG4 autoantibody development in myasthenia gravis.
J.Exp.Med., 217, 2020
6WYT
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BU of 6wyt by Molmil
Crystal structure of anti-Muscle Specific Kinase (MuSK) Fab, MuSK1B
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, MuSK1B heavy chain, ...
著者Vieni, C, Ekiert, D.
登録日2020-05-13
公開日2020-07-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Affinity maturation is required for pathogenic monovalent IgG4 autoantibody development in myasthenia gravis.
J.Exp.Med., 217, 2020
7MI6
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BU of 7mi6 by Molmil
Yeast dynein motor domain in the presence of a pyrazolo-pyrimidinone-based compound, Model 1
分子名称: (8S)-6-(3-bromophenoxy)-2-[1-(4-chlorophenyl)cyclopropyl]-7-hydroxypyrazolo[1,5-a]pyrimidine-3-carbonitrile, ADENOSINE-5'-TRIPHOSPHATE, Fusion protein of Dynein and Endolysin, ...
著者Santarossa, C.C, Urnavicius, L, Coudray, N, Ekeirt, D.C, Bhabha, G, Kapoor, T.M.
登録日2021-04-16
公開日2021-05-26
最終更新日2021-11-03
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Targeting allostery in the Dynein motor domain with small molecule inhibitors.
Cell Chem Biol, 28, 2021
7SEE
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BU of 7see by Molmil
Structure of E. coli LetB delta (Ring6) mutant, Ring1 in the closed state (Model 1)
分子名称: MCE family protein, Intermembrane transport protein YebT chimera, UNKNOWN ATOM OR ION
著者Vieni, C, Coudray, N, Bhabha, G, Ekiert, D.
登録日2021-09-30
公開日2022-02-09
最終更新日2022-03-02
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Role of Ring6 in the Function of the E. coli MCE Protein LetB.
J.Mol.Biol., 434, 2022
7SEF
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BU of 7sef by Molmil
Structure of E. coli LetB delta (Ring6) mutant, Ring 1 in the open state (Model 2, Rings 1-3 only)
分子名称: MCE family protein, Intermembrane transport protein YebT chimera
著者Vieni, C, Coudray, N, Bhabha, G, Ekiert, D.
登録日2021-09-30
公開日2022-02-09
最終更新日2022-03-02
実験手法ELECTRON MICROSCOPY (3.55 Å)
主引用文献Role of Ring6 in the Function of the E. coli MCE Protein LetB.
J.Mol.Biol., 434, 2022
7UDJ
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BU of 7udj by Molmil
Crystal structure of designed helical repeat protein RPB_PEW3_R4 bound to PAWx4 peptide
分子名称: 4xPAW peptide, De novo designed helical repeat protein RPB_PEW3_R4
著者Redler, R.L, Chang, Y, Bhabha, G, Ekiert, D.
登録日2022-03-20
公開日2023-03-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
8SMQ
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BU of 8smq by Molmil
Crystal Structure of the N-terminal Domain of the Cryptic Surface Protein (CD630_25440) from Clostridium difficile.
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
著者Minasov, G, Shuvalova, L, Brunzelle, J.S, Kiryukhina, O, Wawrzak, Z, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2023-04-26
公開日2023-05-10
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Protein target highlights in CASP15: Analysis of models by structure providers.
Proteins, 91, 2023
3LZG
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BU of 3lzg by Molmil
Crystal structure of a 2009 H1N1 influenza virus hemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
著者Xu, R, Wilson, I.A.
登録日2010-03-01
公開日2010-04-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis of preexisting immunity to the 2009 H1N1 pandemic influenza virus.
Science, 328, 2010
5J8E
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BU of 5j8e by Molmil
Crystal structure of human Hook3's conserved Hook domain
分子名称: Protein Hook homolog 3
著者Schroeder, C.M, Ekiert, D.C, Vale, R.D.
登録日2016-04-07
公開日2016-04-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Assembly and activation of dynein-dynactin by the cargo adaptor protein Hook3.
J.Cell Biol., 214, 2016
4NM8
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BU of 4nm8 by Molmil
Crystal structure of broadly neutralizing antibody CR8043 bound to H3 influenza hemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody CR8043, ...
著者Lee, P.S, Wilson, I.A.
登録日2013-11-14
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (4.0041 Å)
主引用文献A common solution to group 2 influenza virus neutralization.
Proc.Natl.Acad.Sci.USA, 111, 2014
4NM4
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BU of 4nm4 by Molmil
Crystal structure of broadly neutralizing antibody CR8043
分子名称: Antibody CR8043, Heavy Chain, Light Chain, ...
著者Lee, P.S, Wilson, I.A.
登録日2013-11-14
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献A common solution to group 2 influenza virus neutralization.
Proc.Natl.Acad.Sci.USA, 111, 2014
4W7G
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BU of 4w7g by Molmil
Crystal Structure of the Dynein Light Intermediate Chain's Conserved Domain
分子名称: Dynein Light Intermediate Chain
著者Schroeder, C.M, Ekiert, D.C, Vale, R.D.
登録日2014-08-22
公開日2014-10-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Ras-like domain in the light intermediate chain bridges the dynein motor to a cargo-binding region.
Elife, 3, 2014
4HLZ
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BU of 4hlz by Molmil
Crystal Structure of Fab C179 in Complex with a H2N2 influenza virus hemagglutinin
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Dreyfus, C, Wilson, I.A.
登録日2012-10-17
公開日2013-04-17
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of a classical broadly neutralizing stem antibody in complex with a pandemic h2 influenza virus hemagglutinin.
J.Virol., 87, 2013
4FQM
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BU of 4fqm by Molmil
Structure of B/Brisbane/60/2008 Influenza Hemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
著者Dreyfus, C, Laursen, N.S, Wilson, I.A.
登録日2012-06-25
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Highly conserved protective epitopes on influenza B viruses.
Science, 337, 2012
4FQL
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BU of 4fql by Molmil
Influenza B HA Antibody (Fab) CR8033
分子名称: monoclonal antibody CR8033 heavy chain, monoclonal antibody CR8033 light chain
著者Dreyfus, C, Laursen, N.S, Wilson, I.A.
登録日2012-06-25
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Highly conserved protective epitopes on influenza B viruses.
Science, 337, 2012
4FQH
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BU of 4fqh by Molmil
Crystal Structure of Fab CR9114
分子名称: 1,2-ETHANEDIOL, NITRATE ION, antibody CR9114 heavy chain, ...
著者Dreyfus, C, Wilson, I.A.
登録日2012-06-25
公開日2012-08-22
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Highly conserved protective epitopes on influenza B viruses.
Science, 337, 2012
4FQK
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BU of 4fqk by Molmil
Influenza B/Brisbane/60/2008 hemagglutinin Fab CR8059 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody CR8059 Heavy Chain, ...
著者Dreyfus, C, Laursen, N.S, Wilson, I.A.
登録日2012-06-25
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (5.65 Å)
主引用文献Highly conserved protective epitopes on influenza B viruses.
Science, 337, 2012

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