Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6GL2
DownloadVisualize
BU of 6gl2 by Molmil
Structure of ZgEngAGH5_4 wild type at 1.2 Angstrom resolution
Descriptor: Endoglucanase, family GH5, IMIDAZOLE
Authors:Dorival, J, Ruppert, S, Gunnoo, M, Orlowski, A, Chapelais, M, Dabin, J, Labourel, A, Thompson, D, Michel, G, Czjzek, M, Genicot, S.
Deposit date:2018-05-22
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:The laterally acquired GH5ZgEngAGH5_4from the marine bacteriumZobellia galactanivoransis dedicated to hemicellulose hydrolysis.
Biochem. J., 475, 2018
5OPQ
DownloadVisualize
BU of 5opq by Molmil
A 3,6-anhydro-D-galactosidase produced by Zobellia galactanivorans. This is an exo-lytic enzyme that hydrolyzes terminal 3,6-anhydro-D-galactose from the non-reducing end of carrageenan oligosaccharides.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6-anhydro-D-galactosidase, ...
Authors:Ficko-Blean, E, Michel, G, Czjzek, M.
Deposit date:2017-08-10
Release date:2017-11-29
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria.
Nat Commun, 8, 2017
5OLC
DownloadVisualize
BU of 5olc by Molmil
Crystal structure of the 3,6-anhydro-D-galactonate cycloisomerase from Zobellia galactanivorans
Descriptor: Galactonate dehydratase, MAGNESIUM ION
Authors:Michel, G, Czjzek, M, Jam, M.
Deposit date:2017-07-27
Release date:2017-12-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria.
Nat Commun, 8, 2017
6HY3
DownloadVisualize
BU of 6hy3 by Molmil
Three-dimensional structure of AgaC from Zobellia galactanivorans
Descriptor: 1,2-ETHANEDIOL, Beta-agarase C, GLYCEROL, ...
Authors:Naretto, A, Fanuel, M, Ropartz, D, Rogniaux, H, Larocque, R, Czjzek, M, Tellier, C, Michel, G.
Deposit date:2018-10-19
Release date:2019-03-13
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The agar-specific hydrolaseZgAgaC from the marine bacteriumZobellia galactanivoransdefines a new GH16 protein subfamily.
J.Biol.Chem., 294, 2019
5G2T
DownloadVisualize
BU of 5g2t by Molmil
BT1596 in complex with its substrate 4,5 unsaturated uronic acid alpha 1,4 D-Glucosamine-2-N, 6-O-disulfate
Descriptor: 1,2-ETHANEDIOL, 2-O GLYCOSAMINOGLYCAN SULFATASE, 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid, ...
Authors:Cartmell, A, Lowe, E.C, Basle, A, Crouch, L.I, Czjzek, M, Turnbull, J, Henrissat, B, Terrapon, N, Thomas, S, Murray, H, Firbank, S.J, Bolam, D.N.
Deposit date:2016-04-13
Release date:2017-05-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5G2V
DownloadVisualize
BU of 5g2v by Molmil
Structure of BT4656 in complex with its substrate D-Glucosamine-2-N, 6-O-disulfate.
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, CALCIUM ION, N-ACETYLGLUCOSAMINE-6-SULFATASE, ...
Authors:Cartmell, A, Lowe, E.C, Basle, A, Crouch, L.I, Czjzek, M, Turnbull, J, Henrissat, B, Terrapon, N, Thomas, S, Murray, H, Firbank, S.J, Bolam, D.N.
Deposit date:2016-04-14
Release date:2017-05-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5G2U
DownloadVisualize
BU of 5g2u by Molmil
Structure of BT1596,a 2-O GAG sulfatase
Descriptor: 2-O GLYCOSAMINOGLYCAN SULFATASE, CITRIC ACID, ZINC ION
Authors:Cartmell, A, Lowe, E.C, Basle, A, Crouch, L.I, Czjzek, M, Turnbull, J, Henrissat, B, Terrapon, N, Thomas, S, Murray, H, Firbank, S.J, Bolam, D.N.
Deposit date:2016-04-14
Release date:2017-05-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2YA1
DownloadVisualize
BU of 2ya1 by Molmil
Product complex of a multi-modular glycogen-degrading pneumococcal virulence factor SpuA
Descriptor: PUTATIVE ALKALINE AMYLOPULLULANASE, SODIUM ION, SULFATE ION, ...
Authors:Lammerts van Bueren, A, Ficko-Blean, E, Pluvinage, B, Hehemann, J.H, Higgins, M.A, Deng, L, Ogunniyi, A.D, Stroeher, U.H, Warry, N.E, Burke, R.D, Czjzek, M, Paton, J.C, Vocadlo, D.J, Boraston, A.B.
Deposit date:2011-02-17
Release date:2011-04-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Conformation and Function of a Multimodular Glycogen-Degrading Pneumococcal Virulence Factor.
Structure, 19, 2011
2YA2
DownloadVisualize
BU of 2ya2 by Molmil
Catalytic Module of the Multi-modular glycogen-degrading pneumococcal virulence factor SpuA in complex with an inhibitor.
Descriptor: 1-DEOXYNOJIRIMYCIN, CALCIUM ION, PUTATIVE ALKALINE AMYLOPULLULANASE, ...
Authors:Lammerts van Bueren, A, Ficko-Blean, E, Pluvinage, B, Hehemann, J.H, Higgins, M.A, Deng, L, Ogunniyi, A.D, Stroeher, U.H, Warry, N.E, Burke, R.D, Czjzek, M, Paton, J.C, Vocadlo, D.J, Boraston, A.B.
Deposit date:2011-02-17
Release date:2011-04-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:The Conformation and Function of a Multimodular Glycogen-Degrading Pneumococcal Virulence Factor.
Structure, 19, 2011
2YA0
DownloadVisualize
BU of 2ya0 by Molmil
Catalytic Module of the Multi-modular glycogen-degrading pneumococcal virulence factor SpuA
Descriptor: CALCIUM ION, GLYCEROL, PUTATIVE ALKALINE AMYLOPULLULANASE, ...
Authors:Lammerts van Bueren, A, Ficko-Blean, E, Pluvinage, B, Hehemann, J.H, Higgins, M.A, Deng, L, Ogunniyi, A.D, Stroeher, U.H, Warry, N.E, Burke, R.D, Czjzek, M, Paton, J.C, Vocadlo, D.J, Boraston, A.B.
Deposit date:2011-02-17
Release date:2011-04-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Conformation and Function of a Multimodular Glycogen-Degrading Pneumococcal Virulence Factor.
Structure, 19, 2011
4ATE
DownloadVisualize
BU of 4ate by Molmil
High resolution crystal structure of beta-porphyranase A from Zobellia galactanivorans
Descriptor: BETA-PORPHYRANASE A, CALCIUM ION, CHLORIDE ION, ...
Authors:Hehemann, J.H, Correc, G, Jam, M, Michel, G, Czjzek, M.
Deposit date:2012-05-06
Release date:2012-07-25
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine Bacterium Zobellia Galactanivorans.
J.Biol.Chem., 287, 2012
4ATF
DownloadVisualize
BU of 4atf by Molmil
Crystal structure of inactivated mutant beta-agarase B in complex with agaro-octaose
Descriptor: 3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose, BETA-AGARASE B, SODIUM ION
Authors:Bernard, T, Hehemann, J.H, Correc, G, Jam, M, Michel, G, Czjzek, M.
Deposit date:2012-05-06
Release date:2012-07-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine Bacterium Zobellia Galactanivorans.
J.Biol.Chem., 287, 2012
1DK0
DownloadVisualize
BU of 1dk0 by Molmil
CRYSTAL STRUCTURE OF THE HEMOPHORE HASA FROM SERRATIA MARCESCENS CRYSTAL FORM P2(1), PH8
Descriptor: HEME-BINDING PROTEIN A, PROTOPORPHYRIN IX CONTAINING FE
Authors:Arnoux, P, Haser, R, Izadi-Pruneyre, N, Lecroisey, A, Czjzek, M.
Deposit date:1999-12-06
Release date:2000-12-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Functional aspects of the heme bound hemophore HasA by structural analysis of various crystal forms.
Proteins, 41, 2000
1DKH
DownloadVisualize
BU of 1dkh by Molmil
CRYSTAL STRUCTURE OF THE HEMOPHORE HASA, PH 6.5
Descriptor: HEME-BINDING PROTEIN A, PROTOPORPHYRIN IX CONTAINING FE, SAMARIUM (III) ION, ...
Authors:Arnoux, P, Haser, R, Izadi-Pruneyre, N, Lecroisey, A, Czjzek, M.
Deposit date:1999-12-07
Release date:2000-12-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Functional aspects of the heme bound hemophore HasA by structural analysis of various crystal forms.
Proteins, 41, 2000
7ASZ
DownloadVisualize
BU of 7asz by Molmil
L-2-haloacid dehalogenase H190A mutant from Zobellia galactanivorans
Descriptor: (S)-2-haloacid dehalogenase, PHOSPHATE ION, THIOCYANATE ION
Authors:Grigorian, E, Roret, T, Czjzek, M, Leblanc, C, Delage, L.
Deposit date:2020-10-28
Release date:2021-09-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:X-ray structure and mechanism of ZgHAD, a L-2-haloacid dehalogenase from the marine Flavobacterium Zobellia galactanivorans.
Protein Sci., 2022
7ARP
DownloadVisualize
BU of 7arp by Molmil
Native L-2-haloacid dehalogenase from Zobellia galactanivorans
Descriptor: (S)-2-haloacid dehalogenase, PHOSPHATE ION, THIOCYANATE ION
Authors:Grigorian, E, Roret, T, Czjzek, M, Leblanc, C, Delage, L.
Deposit date:2020-10-26
Release date:2021-09-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:X-ray structure and mechanism of ZgHAD, a L-2-haloacid dehalogenase from the marine Flavobacterium Zobellia galactanivorans.
Protein Sci., 2022
7AJ0
DownloadVisualize
BU of 7aj0 by Molmil
Crystal structure of PsFucS1 sulfatase from Pseudoalteromonas sp.
Descriptor: Arylsulfatase, CALCIUM ION, CHLORIDE ION
Authors:Roret, T, Mikkelsen, M.D, Czjzek, M, Meyer, A.S.
Deposit date:2020-09-28
Release date:2021-09-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A novel thermostable prokaryotic fucoidan active sulfatase PsFucS1 with an unusual quaternary hexameric structure.
Sci Rep, 11, 2021
3ZJK
DownloadVisualize
BU of 3zjk by Molmil
crystal structure of Ttb-gly F401S mutant
Descriptor: BETA GLYCOSIDASE, CHLORIDE ION, GLYCEROL
Authors:Teze, D, Tran, V, Tellier, C, Dion, M, Leroux, C, Roncza, J, Czjzek, M.
Deposit date:2013-01-18
Release date:2013-02-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Semi-Rational Approach for Converting a Gh1 Beta-Glycosidase Into a Beta-Transglycosidase.
Protein Eng.Des.Sel., 27, 2014
1E08
DownloadVisualize
BU of 1e08 by Molmil
Structural model of the [Fe]-Hydrogenase/cytochrome c553 complex combining NMR and soft-docking
Descriptor: 1,3-PROPANEDITHIOL, CARBON MONOXIDE, CYANIDE ION, ...
Authors:Morelli, X, Czjzek, M, Hatchikian, C.E, Bornet, O, Fontecilla-Camps, J.C, Palma, N.P, Moura, J.J.G, Guerlesquin, F.
Deposit date:2000-03-13
Release date:2000-08-25
Last modified:2019-11-27
Method:SOLUTION NMR, THEORETICAL MODEL
Cite:Structural Model of the Fe-Hydrogenase/Cytochrome C553 Complex Combining Transverse Relaxation-Optimized Spectroscopy Experiments and Soft Docking Calculations.
J.Biol.Chem., 275, 2000
3ZPY
DownloadVisualize
BU of 3zpy by Molmil
Crystal structure of the marine PL7 alginate lyase AlyA1 from Zobellia galactanivorans
Descriptor: ALGINATE LYASE, FAMILY PL7, SODIUM ION
Authors:Thomas, F, Jeudy, A, Michel, G, Czjzek, M.
Deposit date:2013-03-04
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Comparative Characterization of Two Marine Alginate Lyases from Zobellia Galactanivorans Reveals Distinct Modes of Action and Exquisite Adaptation to Their Natural Substrate.
J.Biol.Chem., 288, 2013
2UWB
DownloadVisualize
BU of 2uwb by Molmil
Crystal structure of the Nasturtium seedling mutant xyloglucanase isoform NXG1-delta-YNIIG
Descriptor: CELLULASE
Authors:Baumann, M.J, Eklof, J, Michel, G, Kallasa, A, Teeri, T.T, Brumer, H, Czjzek, M.
Deposit date:2007-03-20
Release date:2007-06-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Evidence for the Evolution of Xyloglucanase Activity from Xyloglucan Endo-Transglycosylases: Biological Implications for Cell Wall Metabolism.
Plant Cell, 19, 2007
2V5C
DownloadVisualize
BU of 2v5c by Molmil
Family 84 glycoside hydrolase from Clostridium perfringens, 2.1 Angstrom structure
Descriptor: CACODYLATE ION, CALCIUM ION, O-GLCNACASE NAGJ, ...
Authors:Ficko-Blean, E, Gregg, K.J, Adams, J.J, Hehemann, J.H, Smith, S.J, Czjzek, M, Boraston, A.B.
Deposit date:2008-10-02
Release date:2009-01-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Portrait of an Enzyme: A Complete Structural Analysis of a Multi-Modular Beta-N-Acetylglucosaminidase from Clostridium Perfringens
J.Biol.Chem., 284, 2009
2UWA
DownloadVisualize
BU of 2uwa by Molmil
Crystal structure of the Nasturtium seedling xyloglucanase isoform NXG1
Descriptor: CELLULASE, GLYCEROL
Authors:Baumann, M.J, Eklof, J, Michel, G, Kallasa, A, Teeri, T.T, Brumer, H, Czjzek, M.
Deposit date:2007-03-19
Release date:2007-06-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Evidence for the Evolution of Xyloglucanase Activity from Xyloglucan Endo-Transglycosylases: Biological Implications for Cell Wall Metabolism.
Plant Cell, 19, 2007
2UWC
DownloadVisualize
BU of 2uwc by Molmil
Crystal structure of Nasturtium xyloglucan hydrolase isoform NXG2
Descriptor: CELLULASE
Authors:Baumann, M.J, Eklof, J.M, Michel, G, Kallas, A, Teeri, T.T, Brumer, H, Czjzek, M.
Deposit date:2007-03-20
Release date:2007-06-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Evidence for the Evolution of Xyloglucanase Activity from Xyloglucan Endo-Transglycosylases: Biological Implications for Cell Wall Metabolism.
Plant Cell, 19, 2007
2V5D
DownloadVisualize
BU of 2v5d by Molmil
Structure of a Family 84 Glycoside Hydrolase and a Family 32 Carbohydrate-Binding Module in Tandem from Clostridium perfringens.
Descriptor: CALCIUM ION, O-GLCNACASE NAGJ
Authors:Ficko-Blean, E, Gregg, K.J, Adams, J.J, Hehemann, J.H, Smith, S.J, Czjzek, M, Boraston, A.B.
Deposit date:2008-10-02
Release date:2009-01-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Portrait of an Enzyme: A Complete Structural Analysis of a Multi-Modular Beta-N-Acetylglucosaminidase from Clostridium Perfringens
J.Biol.Chem., 284, 2009

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon