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1IF0
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BU of 1if0 by Molmil
PSEUDO-ATOMIC MODEL OF BACTERIOPHAGE HK97 PROCAPSID (PROHEAD II)
分子名称: PROTEIN (MAJOR CAPSID PROTEIN GP5)
著者Conway, J.F, Wikoff, W.R, Cheng, N, Duda, R.L, Hendrix, R.W, Johnson, J.E, Steven, A.C.
登録日2001-04-11
公開日2001-05-02
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Virus maturation involving large subunit rotations and local refolding.
Science, 292, 2001
4V4U
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BU of 4v4u by Molmil
The quasi-atomic model of Human Adenovirus type 5 capsid
分子名称: HEXON PROTEIN, N-TERMINAL PEPTIDE OF FIBER PROTEIN, PENTON PROTEIN
著者Fabry, C.M.S, Rosa-Calatrava, M, Conway, J.F, Zubieta, C, Cusack, S, Ruigrok, R.W.H, Schoehn, G.
登録日2005-03-03
公開日2014-07-09
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献A Quasi-Atomic Model of Human Adenovirus Type 5 Capsid.
Embo J., 24, 2005
8FQK
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BU of 8fqk by Molmil
Asymmetric unit of HK97 phage prohead I
分子名称: Scaffolding domain delta
著者Huet, A, Oh, B, Maurer, J, Duda, R.L, Conway, J.F.
登録日2023-01-06
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A symmetry mismatch unraveled: How phage HK97 scaffold flexibly accommodates a 12-fold pore at a 5-fold viral capsid vertex.
Sci Adv, 9, 2023
8FQL
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Portal vertex of HK97 phage
分子名称: Portal protein
著者Huet, A, Oh, B, Maurer, J, Duda, R.L, Conway, J.F.
登録日2023-01-06
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献A symmetry mismatch unraveled: How phage HK97 scaffold flexibly accommodates a 12-fold pore at a 5-fold viral capsid vertex.
Sci Adv, 9, 2023
6BSP
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BU of 6bsp by Molmil
High-Resolution Structure Analysis of Antibody V5 and U4 Conformational Epitope on Human Papillomavirus 16
分子名称: Major capsid protein L1, U4 Heavy chain, U4 Light chain
著者Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christenson, N.D, Hafenstein, S.
登録日2017-12-04
公開日2018-02-14
最終更新日2018-10-24
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献High-Resolution Structure Analysis of Antibody V5 and U4 Conformational Epitopes on Human Papillomavirus 16.
Viruses, 9, 2017
6BT3
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High-Resolution Structure Analysis of Antibody V5 Conformational Epitope on Human Papillomavirus 16
分子名称: Major capsid protein L1, V5 Fab Heavy-chain, V5 Fab Light-chain
著者Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S.
登録日2017-12-05
公開日2018-01-17
最終更新日2018-01-24
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献High-Resolution Structure Analysis of Antibody V5 and U4 Conformational Epitopes on Human Papillomavirus 16.
Viruses, 9, 2017
3DDX
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BU of 3ddx by Molmil
HK97 bacteriophage capsid Expansion Intermediate-II model
分子名称: Major capsid protein
著者Lee, K.K, Gan, L, Conway, J.F, Hendrix, R.W, Steven, A.C, Johnson, J.E.
登録日2008-06-06
公開日2008-11-04
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY
主引用文献Virus capsid expansion driven by the capture of mobile surface loops.
Structure, 16, 2008
6OJ0
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BU of 6oj0 by Molmil
Cryo-EM reconstruction of Sulfolobus polyhedral virus 1 (SPV1)
分子名称: Structural protein VP4, Uncharacterized protein
著者Wang, F, Liu, Y, Conway, J.F, Krupovic, M, Prangishvili, D, Egelman, E.H.
登録日2019-04-10
公開日2019-10-02
最終更新日2020-01-08
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献A packing for A-form DNA in an icosahedral virus.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OKB
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BU of 6okb by Molmil
Prohead 2 of the phage T5
分子名称: Major capsid protein
著者Huet, A, Duda, R.L, Boulanger, P, Conway, J.F.
登録日2019-04-12
公開日2019-10-02
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (6.7 Å)
主引用文献Capsid expansion of bacteriophage T5 revealed by high resolution cryoelectron microscopy.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OMC
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BU of 6omc by Molmil
capsid of T5 virion
分子名称: Major capsid protein
著者Huet, A, Duda, R.L, Boulanger, P, Conway, J.F.
登録日2019-04-18
公開日2019-10-02
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Capsid expansion of bacteriophage T5 revealed by high resolution cryoelectron microscopy.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OMA
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BU of 6oma by Molmil
non-decorated head of the phage T5
分子名称: Major capsid protein
著者Huet, A, Duda, R.L, Boulanger, P, Conway, J.F.
登録日2019-04-18
公開日2019-10-02
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Capsid expansion of bacteriophage T5 revealed by high resolution cryoelectron microscopy.
Proc.Natl.Acad.Sci.USA, 116, 2019
6P3E
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BU of 6p3e by Molmil
Mobile loops and electrostatic interactions maintain the flexible lambda tail tube
分子名称: Tail tube protein
著者Campbell, P, Duda, R.L, Nassur, J, Hendrix, R.W, Conway, J.F, Huet, A.
登録日2019-05-23
公開日2019-11-27
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (5.4 Å)
主引用文献Mobile Loops and Electrostatic Interactions Maintain the Flexible Tail Tube of Bacteriophage Lambda.
J.Mol.Biol., 432, 2020
5KEP
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BU of 5kep by Molmil
High resolution cryo-EM maps of Human Papillomavirus 16 reveal L2 location and heparin-induced conformational changes
分子名称: Major capsid protein L1
著者Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S.
登録日2016-06-10
公開日2017-01-25
最終更新日2023-04-05
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryoelectron Microscopy Maps of Human Papillomavirus 16 Reveal L2 Densities and Heparin Binding Site.
Structure, 25, 2017
5KEQ
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BU of 5keq by Molmil
High resolution cryo-EM maps of Human papillomavirus 16 reveal L2 location and heparin-induced conformational changes
分子名称: Major capsid protein L1
著者Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S.
登録日2016-06-10
公開日2017-01-25
最終更新日2023-04-05
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryoelectron Microscopy Maps of Human Papillomavirus 16 Reveal L2 Densities and Heparin Binding Site.
Structure, 25, 2017
2C9F
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BU of 2c9f by Molmil
THE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON DODECAHEDRON
分子名称: FIBER, PENTON PROTEIN
著者Fuschiotti, P, Schoehn, G, Fender, P, Fabry, C.M.S, Hewat, E.A, Chroboczek, J, Ruigrok, R.W.H, Conway, J.F.
登録日2005-12-12
公開日2006-03-02
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (16.5 Å)
主引用文献Structure of the Dodecahedral Penton Particle from Human Adenovirus Type 3.
J.Mol.Biol., 356, 2006
2C9G
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BU of 2c9g by Molmil
THE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON BASE DODECAHEDRON
分子名称: PENTON PROTEIN
著者Fuschiotti, P, Schoehn, G, Fender, P, Fabry, C.M.S, Hewat, E.A, Chroboczek, J, Ruigrok, R.W.H, Conway, J.F.
登録日2005-12-12
公開日2006-01-04
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (9.3 Å)
主引用文献Structure of the Dodecahedral Penton Particle from Human Adenovirus Type 3.
J.Mol.Biol., 356, 2006
2FTE
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BU of 2fte by Molmil
Bacteriophage HK97 Expansion Intermediate IV
分子名称: major capsid protein
著者Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
登録日2006-01-24
公開日2006-02-07
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY
主引用文献Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
8EDU
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BU of 8edu by Molmil
Mycobacteriophage Muddy capsid
分子名称: Capsid
著者Freeman, K.G, White, S.J, Huet, A, Conway, J.F.
登録日2022-09-06
公開日2023-02-01
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献A structural dendrogram of the actinobacteriophage major capsid proteins provides important structural insights into the evolution of capsid stability.
Structure, 31, 2023
2FSY
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BU of 2fsy by Molmil
Bacteriophage HK97 Pepsin-treated Expansion Intermediate IV
分子名称: major capsid protein
著者Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
登録日2006-01-23
公開日2006-02-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
2FRP
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BU of 2frp by Molmil
Bacteriophage HK97 Expansion Intermediate IV
分子名称: Major capsid protein
著者Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
登録日2006-01-19
公開日2006-02-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (7.5 Å)
主引用文献Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
2FT1
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BU of 2ft1 by Molmil
Bacteriophage HK97 Head II
分子名称: major capsid protein
著者Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
登録日2006-01-23
公開日2006-02-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
2FS3
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BU of 2fs3 by Molmil
Bacteriophage HK97 K169Y Head I
分子名称: Major capsid protein
著者Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
登録日2006-01-20
公開日2006-02-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
3J6M
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BU of 3j6m by Molmil
Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle
分子名称: Coxsackievirus and adenovirus receptor
著者Organtini, L.J, Makhov, A.M, Conway, J.F, Hafenstein, S, Carson, S.D.
登録日2014-03-19
公開日2014-04-09
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Kinetic and structural analysis of coxsackievirus b3 receptor interactions and formation of the a-particle.
J.Virol., 88, 2014
3J6O
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Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle
分子名称: Coxsackie and adenovirus receptor
著者Organtini, L.J, Makhov, A.M, Conway, J.F, Hafenstein, S, Carson, S.D.
登録日2014-03-19
公開日2014-04-09
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Kinetic and structural analysis of coxsackievirus b3 receptor interactions and formation of the a-particle.
J.Virol., 88, 2014
3J3Z
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Structure of MA28-7 neutralizing antibody Fab fragment from electron cryo-microscopy of enterovirus 71 complexed with a Fab fragment
分子名称: MA28-7 neutralizing antibody heavy chain, MA28-7 neutralizing antibody light chain
著者Lee, H, Cifuente, J.O, Ashley, R.E, Conway, J.F, Makhov, A.M, Tano, Y, Shimizu, H, Nishimura, Y, Hafenstein, S.
登録日2013-05-21
公開日2013-08-28
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (23.4 Å)
主引用文献A strain-specific epitope of enterovirus 71 identified by cryo-electron microscopy of the complex with fab from neutralizing antibody.
J.Virol., 87, 2013

 

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