Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6ODF
DownloadVisualize
BU of 6odf by Molmil
EEEV glycoproteins bound with heparan sulfate
分子名称: 2-O-sulfo-beta-L-galactopyranuronic acid-(1-4)-[(2R,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(sulfooxy)tetrahydro-2H-pyran-3-yl]sulfamic acid, E1, E2
著者Rossmann, M.G, Chen, C.L.
登録日2019-03-26
公開日2020-04-01
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Cryo-EM structure of eastern equine encephalitis virus in complex with heparan sulfate analogues.
Proc.Natl.Acad.Sci.USA, 117, 2020
6MX4
DownloadVisualize
BU of 6mx4 by Molmil
CryoEM structure of chimeric Eastern Equine Encephalitis Virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid, ...
著者Hasan, S.S, Sun, C, Kim, A.S, Watanabe, Y, Chen, C.L, Klose, T, Buda, G, Crispin, M, Diamond, M.S, Klimstra, W.B, Rossmann, M.G.
登録日2018-10-30
公開日2018-12-19
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Cryo-EM Structures of Eastern Equine Encephalitis Virus Reveal Mechanisms of Virus Disassembly and Antibody Neutralization.
Cell Rep, 25, 2018
6MWC
DownloadVisualize
BU of 6mwc by Molmil
CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-5 antibody
分子名称: E1, E2, EEEV-5 antibody heavy chain, ...
著者Hasan, S.S, Sun, C, Kim, A.S, Watanabe, Y, Chen, C.L, Klose, T, Buda, G, Crispin, M, Diamond, M.S, Klimstra, W.B, Rossmann, M.G.
登録日2018-10-29
公開日2018-12-19
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献Cryo-EM Structures of Eastern Equine Encephalitis Virus Reveal Mechanisms of Virus Disassembly and Antibody Neutralization.
Cell Rep, 25, 2018
6MW9
DownloadVisualize
BU of 6mw9 by Molmil
CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-3 antibody
分子名称: E1, E2, EEEV-3 antibody heavy chain, ...
著者Hasan, S.S, Sun, C, Kim, A.S, Watanabe, Y, Chen, C.L, Klose, T, Buda, G, Crispin, M, Diamond, M.S, Klimstra, W.B, Rossmann, M.G.
登録日2018-10-29
公開日2018-12-19
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (7.3 Å)
主引用文献Cryo-EM Structures of Eastern Equine Encephalitis Virus Reveal Mechanisms of Virus Disassembly and Antibody Neutralization.
Cell Rep, 25, 2018
6MWX
DownloadVisualize
BU of 6mwx by Molmil
CryoEM structure of Chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-69 Antibody
分子名称: E1, E2, EEEV-69 antibody heavy chain, ...
著者Hasan, S.S, Sun, C, Kim, A.S, Watanabe, Y, Chen, C.L, Klose, T, Buda, G, Crispin, M, Diamond, M.S, Klimstra, W.B, Rossmann, M.G.
登録日2018-10-30
公開日2018-12-19
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (8.2 Å)
主引用文献Cryo-EM Structures of Eastern Equine Encephalitis Virus Reveal Mechanisms of Virus Disassembly and Antibody Neutralization.
Cell Rep, 25, 2018
6MUI
DownloadVisualize
BU of 6mui by Molmil
CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-42 antibody
分子名称: E1, E2, EEEV-42 antibody heavy chain, ...
著者Hasan, S.S, Sun, C, Kim, A.S, Watanabe, Y, Chen, C.L, Klose, T, Buda, G, Crispin, M, Diamond, M.S, Klimstra, W.B, Rossmann, M.G.
登録日2018-10-23
公開日2018-12-19
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Cryo-EM Structures of Eastern Equine Encephalitis Virus Reveal Mechanisms of Virus Disassembly and Antibody Neutralization.
Cell Rep, 25, 2018
6MX7
DownloadVisualize
BU of 6mx7 by Molmil
CryoEM structure of chimeric Eastern Equine Encephalitis Virus: Genome-Binding Capsid N-terminal Domain
分子名称: Capsid
著者Hasan, S.S, Sun, C, Kim, A.S, Watanabe, Y, Chen, C.L, Klose, T, Buda, G, Crispin, M, Diamond, M.S, Klimstra, W.B, Rossmann, M.G.
登録日2018-10-30
公開日2018-12-19
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Cryo-EM Structures of Eastern Equine Encephalitis Virus Reveal Mechanisms of Virus Disassembly and Antibody Neutralization.
Cell Rep, 25, 2018
6MWV
DownloadVisualize
BU of 6mwv by Molmil
CryoEM structure of Chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-58 Antibody
分子名称: E1, E2, EEEV-58 antibody heavy chain, ...
著者Hasan, S.S, Sun, C, Kim, A.S, Watanabe, Y, Chen, C.L, Klose, T, Buda, G, Crispin, M, Diamond, M.S, Klimstra, W.B, Rossmann, M.G.
登録日2018-10-30
公開日2018-12-19
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (7.3 Å)
主引用文献Cryo-EM Structures of Eastern Equine Encephalitis Virus Reveal Mechanisms of Virus Disassembly and Antibody Neutralization.
Cell Rep, 25, 2018
4NPN
DownloadVisualize
BU of 4npn by Molmil
Crystal structure of human tetra-SUMO-2
分子名称: Small ubiquitin-related modifier 2
著者Kung, C.C.-H, Naik, M.T, Chen, C.L, Ma, C, Huang, T.H.
登録日2013-11-22
公開日2014-10-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.633 Å)
主引用文献Structural analysis of poly-SUMO chain recognition by the RNF4-SIMs domain.
Biochem.J., 462, 2014
6E2S
DownloadVisualize
BU of 6e2s by Molmil
apo form of MDDEF with buffer exchange
分子名称: Mevalonate diphosphate decarboxylase, SULFATE ION
著者Stauffacher, C.V, Chen, C.-L.
登録日2018-07-12
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.791 Å)
主引用文献Visualizing the enzyme mechanism of mevalonate diphosphate decarboxylase.
Nat Commun, 11, 2020
6E2T
DownloadVisualize
BU of 6e2t by Molmil
MDDEF in complex with MVAPP
分子名称: (3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID, Mevalonate diphosphate decarboxylase
著者Stauffacher, C.V, Chen, C.-L.
登録日2018-07-12
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.692 Å)
主引用文献Visualizing the enzyme mechanism of mevalonate diphosphate decarboxylase.
Nat Commun, 11, 2020
6E2U
DownloadVisualize
BU of 6e2u by Molmil
MDDEF in complex with MVAPP, AMPPCP and Magnesium
分子名称: (3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID, MAGNESIUM ION, Mevalonate diphosphate decarboxylase, ...
著者Stauffacher, C.V, Chen, C.-L.
登録日2018-07-12
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Visualizing the enzyme mechanism of mevalonate diphosphate decarboxylase.
Nat Commun, 11, 2020
6E2W
DownloadVisualize
BU of 6e2w by Molmil
MDDEF in complex with MVAPP, ADP, sulfate and cobalt
分子名称: (3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, COBALT (II) ION, ...
著者Stauffacher, C.V, Chen, C.-L.
登録日2018-07-12
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Visualizing the enzyme mechanism of mevalonate diphosphate decarboxylase.
Nat Commun, 11, 2020
6E2V
DownloadVisualize
BU of 6e2v by Molmil
MDDEF in complex with MVAPP, ADPBeF3 and magnesium
分子名称: (3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
著者Stauffacher, C.V, Chen, C.-L.
登録日2018-07-12
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Visualizing the enzyme mechanism of mevalonate diphosphate decarboxylase.
Nat Commun, 11, 2020
6E2Y
DownloadVisualize
BU of 6e2y by Molmil
MDDEF in complex with MVAPP, ADP, sulfate and cobalt. Anomalous data
分子名称: (3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, COBALT (II) ION, ...
著者Stauffacher, C.V, Chen, C.-L.
登録日2018-07-12
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Visualizing the enzyme mechanism of mevalonate diphosphate decarboxylase.
Nat Commun, 11, 2020
7N6A
DownloadVisualize
BU of 7n6a by Molmil
Pre-fusion state 1 of EEEV with localized reconstruction
分子名称: Spike glycoprotein E1, Spike glycoprotein E2
著者Chen, C.-L, Kuhn, R.J, Klose, T.
登録日2021-06-07
公開日2022-06-22
最終更新日2022-08-03
実験手法ELECTRON MICROSCOPY (14.3 Å)
主引用文献Cryo-EM structures of alphavirus conformational intermediates in low pH-triggered prefusion states.
Proc.Natl.Acad.Sci.USA, 119, 2022
7N69
DownloadVisualize
BU of 7n69 by Molmil
Pre-fusion state 2 of EEEV with localized reconstruction
分子名称: Spike glycoprotein E1, Spike glycoprotein E2
著者Chen, C.-L, Kuhn, R.J, Klose, T.
登録日2021-06-07
公開日2022-06-22
最終更新日2022-08-03
実験手法ELECTRON MICROSCOPY (14.1 Å)
主引用文献Cryo-EM structures of alphavirus conformational intermediates in low pH-triggered prefusion states.
Proc.Natl.Acad.Sci.USA, 119, 2022
8SOC
DownloadVisualize
BU of 8soc by Molmil
Phosphoinositide phosphate 3 kinase gamma bound with ADP and Gbetagamma
分子名称: ADENOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Chen, C.-L, Tesmer, J.J.G.
登録日2023-04-28
公開日2024-04-03
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Molecular basis for G beta gamma-mediated activation of phosphoinositide 3-kinase gamma.
Nat.Struct.Mol.Biol., 2024
8SOD
DownloadVisualize
BU of 8sod by Molmil
Phosphoinositide phosphate 3 kinase gamma bound with ADP and two Gbetagamma subunits in State 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Chen, C.-L, Tesmer, J.J.G.
登録日2023-04-28
公開日2024-04-03
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Molecular basis for G beta gamma-mediated activation of phosphoinositide 3-kinase gamma.
Nat.Struct.Mol.Biol., 2024
8SOA
DownloadVisualize
BU of 8soa by Molmil
Phosphoinositide phosphate 3 kinase gamma bound with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Phosphoinositide 3-kinase regulatory subunit 5, phosphatidylinositol-4,5-bisphosphate 3-kinase
著者Chen, C.-L, Tesmer, J.J.G.
登録日2023-04-28
公開日2024-04-03
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Molecular basis for G beta gamma-mediated activation of phosphoinositide 3-kinase gamma.
Nat.Struct.Mol.Biol., 2024
8SOB
DownloadVisualize
BU of 8sob by Molmil
Phosphoinositide phosphate 3 kinase gamma bound with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Phosphoinositide 3-kinase regulatory subunit 5, phosphatidylinositol-4,5-bisphosphate 3-kinase
著者Chen, C.-L, Tesmer, J.J.G.
登録日2023-04-28
公開日2024-04-03
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Molecular basis for G beta gamma-mediated activation of phosphoinositide 3-kinase gamma.
Nat.Struct.Mol.Biol., 2024
8SO9
DownloadVisualize
BU of 8so9 by Molmil
Phosphoinositide phosphate 3 kinase gamma
分子名称: Phosphoinositide 3-kinase regulatory subunit 5, phosphatidylinositol-4,5-bisphosphate 3-kinase
著者Chen, C.-L, Tesmer, J.J.G.
登録日2023-04-28
公開日2024-04-03
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Molecular basis for G beta gamma-mediated activation of phosphoinositide 3-kinase gamma.
Nat.Struct.Mol.Biol., 2024
8SOE
DownloadVisualize
BU of 8soe by Molmil
Phosphoinositide phosphate 3 kinase gamma bound with ADP and two Gbetagamma subunits in State 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Chen, C.-L, Tesmer, J.J.G.
登録日2023-04-28
公開日2024-04-03
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Molecular basis for G beta gamma-mediated activation of phosphoinositide 3-kinase gamma.
Nat.Struct.Mol.Biol., 2024
5V2L
DownloadVisualize
BU of 5v2l by Molmil
Mevalonate diphosphate mediated ATP binding mechanism of the mevalonate diphosphate decarboxylase from Enterococcus faecalis
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Mevalonate diphosphate decarboxylase, PHOSPHATE ION
著者Stauffacher, C.V, Chen, C.-L.
登録日2017-03-05
公開日2017-10-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mevalonate 5-diphosphate mediates ATP binding to the mevalonate diphosphate decarboxylase from the bacterial pathogen Enterococcus faecalis.
J. Biol. Chem., 292, 2017
5V2M
DownloadVisualize
BU of 5v2m by Molmil
Mevalonate diphosphate mediated ATP binding mechanism of the mevalonate diphosphate decarboxylase from Enterococcus faecalis
分子名称: Mevalonate diphosphate decarboxylase, SULFATE ION
著者Stauffacher, C.V, Chen, C.-L.
登録日2017-03-05
公開日2017-10-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.989 Å)
主引用文献Mevalonate 5-diphosphate mediates ATP binding to the mevalonate diphosphate decarboxylase from the bacterial pathogen Enterococcus faecalis.
J. Biol. Chem., 292, 2017

 

123>

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon