Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5ZOA
DownloadVisualize
BU of 5zoa by Molmil
The crystal structure of a Thermobifida fusca cutinase
分子名称: BTA-hydrolase 1, CHLORIDE ION
著者Dong, Q.L, Wu, L, Wu, J, Zhou, J.H.
登録日2018-04-12
公開日2019-04-17
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.537 Å)
主引用文献The crystal structure of a cutinase from Thermobifida fusca
To Be Published
7V3O
DownloadVisualize
BU of 7v3o by Molmil
The structure of Se-SoBcmB with Fe(II)and AKG
分子名称: 2-OXOGLUTARIC ACID, CHLORIDE ION, FE (II) ION, ...
著者Wu, L, Zhou, J.H.
登録日2021-08-10
公開日2023-02-15
実験手法X-RAY DIFFRACTION (1.83004665 Å)
主引用文献The apo structure of SoBcmB with Fe(II)
To Be Published
7V36
DownloadVisualize
BU of 7v36 by Molmil
The complex structure of soBcmB and its intermediate product 2a
分子名称: (3Z,6S)-3-[(2R)-2-methyl-2,3-bis(oxidanyl)propylidene]-6-[(2S)-4-oxidanylbutan-2-yl]piperazine-2,5-dione, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
著者Wu, L, Zhou, J.H.
登録日2021-08-10
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.96009171 Å)
主引用文献The complex structure of SoBcmB and its intermediate product
To Be Published
7V3E
DownloadVisualize
BU of 7v3e by Molmil
The complex structure of soBcmB and its intermediate product 1a
分子名称: (3S,6Z)-3-[(2S)-butan-2-yl]-6-[(2R)-2-methyl-2,3-bis(oxidanyl)propylidene]piperazine-2,5-dione, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
著者Wu, L, Zhou, J.H.
登録日2021-08-10
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献The crystal structure of SoBcmB and its side way intermediate product
To Be Published
7V2U
DownloadVisualize
BU of 7v2u by Molmil
The complex structure of SoBcmB and its product 2f
分子名称: (1S,5S,6S)-5-methyl-1-[(1S,2S)-2-methyl-1,2,3-tris(oxidanyl)propyl]-2-oxa-7,9-diazabicyclo[4.2.2]decane-8,10-dione, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
著者Wu, L, Zhou, J.H.
登録日2021-08-09
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.00009918 Å)
主引用文献The complex structure of SoBcmB and its product 2f
To Be Published
7V3N
DownloadVisualize
BU of 7v3n by Molmil
The complex structure of soBcmB-D307A and its natural precursor 2
分子名称: (3S,6S)-3-((R)-2,3-dihydroxy-2-methylpropyl)-6-((S)-4-hydroxybutan-2-yl)piperazine-2,5-dione, 2-OXOGLUTARIC ACID, FE (II) ION, ...
著者Wu, L, Zhou, J.H.
登録日2021-08-10
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.850011 Å)
主引用文献The complex structure of SoBcmB mutant D307A and its substrate
To Be Published
7V2X
DownloadVisualize
BU of 7v2x by Molmil
The complex structure of soBcmB and its substrate 1
分子名称: (3S,6S)-3-[(2S)-butan-2-yl]-6-[(2R)-2-methyl-2,3-bis(oxidanyl)propyl]piperazine-2,5-dion, 2-OXOGLUTARIC ACID, FE (II) ION, ...
著者Wu, L, Zhou, J.H.
登録日2021-08-10
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.08387423 Å)
主引用文献The crystal structure of SoBcmB and its side way substrate
To Be Published
7V34
DownloadVisualize
BU of 7v34 by Molmil
The complex structure of soBcmB and its product 1d
分子名称: (3S,4S,5S,8S)-8-[(2S)-butan-2-yl]-3-methyl-3,4-bis(oxidanyl)-1-oxa-7,10-diazaspiro[4.5]decane-6,9-dione, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
著者Wu, L, Zhou, J.H.
登録日2021-08-10
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.000169 Å)
主引用文献The complex structure of SoBcmB and its side way product
To Be Published
7ETL
DownloadVisualize
BU of 7etl by Molmil
The crystal structure of FtmOx1-Y68F
分子名称: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
著者Zhou, J.H, Wu, L.
登録日2021-05-13
公開日2021-12-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.992128 Å)
主引用文献Structural Insight into the Catalytic Mechanism of the Endoperoxide Synthase FtmOx1.
Angew.Chem.Int.Ed.Engl., 61, 2022
7ETK
DownloadVisualize
BU of 7etk by Molmil
The complex structure of FtmOx1 bond with fumitremorgen B at 1.22 angstrom
分子名称: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, FE (II) ION, ...
著者Zhou, J.H, Wu, L.
登録日2021-05-13
公開日2021-12-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.22027433 Å)
主引用文献Structural Insight into the Catalytic Mechanism of the Endoperoxide Synthase FtmOx1.
Angew.Chem.Int.Ed.Engl., 61, 2022
7WZV
DownloadVisualize
BU of 7wzv by Molmil
The structure of a Twitch Radical SAM Dehydrogenase SpeY
分子名称: (1~{S},2~{R},4~{S},5~{R})-2,4-bis(methylamino)-6-[(2~{S},3~{R},4~{S},6~{R})-6-methyl-3,4-bis(oxidanyl)oxan-2-yl]oxy-cyclohexane-1,3,5-triol, 1,2-ETHANEDIOL, 4Fe-4S cluster-binding domain-containing protein, ...
著者Zhou, J.H, Hou, X.L.
登録日2022-02-19
公開日2022-12-28
実験手法X-RAY DIFFRACTION (1.899313 Å)
主引用文献Dioxane Bridge Formation during the Biosynthesis of Spectinomycin Involves a Twitch Radical S -Adenosyl Methionine Dehydrogenase That May Have Evolved from an Epimerase.
J.Am.Chem.Soc., 144, 2022
4O08
DownloadVisualize
BU of 4o08 by Molmil
Crystal structure of bacillus megaterium epoxide hydrolase in complex with an inhibitor
分子名称: 2-phenoxyacetamide, SULFATE ION, Soluble epoxide hydrolase
著者Kong, X.D, Zhou, J.H, Xu, J.H.
登録日2013-12-13
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Engineering of an epoxide hydrolase for efficient bioresolution of bulky pharmaco substrates.
Proc.Natl.Acad.Sci.USA, 111, 2014
4NZZ
DownloadVisualize
BU of 4nzz by Molmil
Crystal structure of epoxide hydrolase from bacillus megaterium
分子名称: Soluble epoxide hydrolase
著者Kong, X.D, Zhou, J.H, Xu, J.H.
登録日2013-12-13
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Engineering of an epoxide hydrolase for efficient bioresolution of bulky pharmaco substrates.
Proc.Natl.Acad.Sci.USA, 111, 2014
4O98
DownloadVisualize
BU of 4o98 by Molmil
Crystal structure of Pseudomonas oleovorans PoOPH mutant H250I/I263W
分子名称: ZINC ION, organophosphorus hydrolase
著者Luo, X.J, Kong, X.D, Zhao, J, Chen, Q, Zhou, J.H, Xu, J.H.
登録日2014-01-02
公開日2014-12-03
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.251 Å)
主引用文献Switching a newly discovered lactonase into an efficient and thermostable phosphotriesterase by simple double mutations His250Ile/Ile263Trp
Biotechnol.Bioeng., 111, 2014
5HSJ
DownloadVisualize
BU of 5hsj by Molmil
Structure of tyrosine decarboxylase complex with PLP at 1.9 Angstroms resolution
分子名称: PYRIDOXAL-5'-PHOSPHATE, Putative decarboxylase
著者Ni, Y, Zhou, J, Zhu, H, Zhang, K.
登録日2016-01-25
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of tyrosine decarboxylase and identification of key residues involved in conformational swing and substrate binding
Sci Rep, 6, 2016
4EML
DownloadVisualize
BU of 4eml by Molmil
Synechocystis sp. PCC 6803 1,4-dihydroxy-2-naphthoyl-coenzyme A synthase (MenB) in complex with bicarbonate
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, BICARBONATE ION, CHLORIDE ION, ...
著者Song, H.G.
登録日2012-04-12
公開日2012-06-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.043 Å)
主引用文献Active site binding and catalytic role of bicarbonate in 1,4-dihydroxy-2-naphthoyl coenzyme A synthases from vitamin K biosynthetic pathways
Biochemistry, 51, 2012
5YB5
DownloadVisualize
BU of 5yb5 by Molmil
The complex crystal structure of VrEH2 mutant M263N with SNO
分子名称: (S)-PARA-NITROSTYRENE OXIDE, Epoxide hydrolase
著者Li, F.L, Chen, F.F, Chen, Q, Kong, X.D, Yu, H.L, Xu, J.H.
登録日2017-09-03
公開日2018-09-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Regioselectivity Engineering of Epoxide Hydrolase: Near-Perfect Enantioconvergence through a Single Site Mutation
Acs Catalysis, 8, 2018
5YQT
DownloadVisualize
BU of 5yqt by Molmil
Crystal Structure of the L74F/M78V/I80V/L114F mutant of LEH complexed with cyclopentene oxide
分子名称: (1R,5S)-6-oxabicyclo[3.1.0]hexane, Limonene-1,2-epoxide hydrolase
著者Kong, X.D, Sun, Z.T, Wu, L, Reetz, M.T, Zhou, J.H, Xu, J.H.
登録日2017-11-07
公開日2018-06-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and Computational Insight into the Catalytic Mechanism of Limonene Epoxide Hydrolase Mutants in Stereoselective Transformations.
J. Am. Chem. Soc., 140, 2018
7BQK
DownloadVisualize
BU of 7bqk by Molmil
The structure of PdxI in complex with its substrate analogue
分子名称: 1,2-ETHANEDIOL, 3-[(E,2S,4S)-2,4-dimethyloct-6-enoyl]-4-oxidanyl-1H-pyridin-2-one, GLYCEROL, ...
著者Cai, Y.J, Ohashi, M, Zhou, J.H, Tang, Y.
登録日2020-03-24
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献An enzymatic Alder-ene reaction.
Nature, 586, 2020
7BQL
DownloadVisualize
BU of 7bql by Molmil
The crystal structure of PdxI complex with the Alder-ene adduct
分子名称: 3-[(1R,2S,4R,6S)-2-ethenyl-4,6-dimethyl-cyclohexyl]-4-oxidanyl-1H-pyridin-2-one, DI(HYDROXYETHYL)ETHER, Methyltransf_2 domain-containing protein
著者Cai, Y.J, Ohashi, M, Zhou, J.H, Tang, Y.
登録日2020-03-24
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献An enzymatic Alder-ene reaction.
Nature, 586, 2020
7BQJ
DownloadVisualize
BU of 7bqj by Molmil
The structure of PdxI
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Methyltransf_2 domain-containing protein, ...
著者Cai, Y.J, Ohashi, M, Zhou, J.H, Tang, Y.
登録日2020-03-24
公開日2020-10-14
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献An enzymatic Alder-ene reaction.
Nature, 586, 2020
7BQO
DownloadVisualize
BU of 7bqo by Molmil
The structure of HpiI in complex with its substrate analogue
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-[(E,2S,4S)-2,4-dimethyloct-6-enoyl]-4-oxidanyl-1H-pyridin-2-one, GLYCEROL, ...
著者Cai, Y.J, Ohashi, M, Zhou, J.H, Tang, Y.
登録日2020-03-25
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献An enzymatic Alder-ene reaction.
Nature, 586, 2020
7BQP
DownloadVisualize
BU of 7bqp by Molmil
The structure of HpiI
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, GLYCEROL, ...
著者Cai, Y.J, Ohashi, M, Zhou, J.H, Tang, Y.
登録日2020-03-25
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献An enzymatic Alder-ene reaction.
Nature, 586, 2020
6ISQ
DownloadVisualize
BU of 6isq by Molmil
structure of Lipase mutant with oxided Cys-His-Asp catalytic triad
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ISOPROPYL ALCOHOL, ...
著者Cen, Y.X, Zhou, J.H, Wu, Q.
登録日2018-11-18
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Artificial cysteine-lipases with high activity and altered catalytic mechanism created by laboratory evolution.
Nat Commun, 10, 2019
6ISR
DownloadVisualize
BU of 6isr by Molmil
structure of lipase mutant with Cys-His-Asp catalytic triad
分子名称: DI(HYDROXYETHYL)ETHER, Lipase B, NICKEL (II) ION, ...
著者Cen, Y.X, Zhou, J.H, Wu, Q.
登録日2018-11-18
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Artificial cysteine-lipases with high activity and altered catalytic mechanism created by laboratory evolution.
Nat Commun, 10, 2019

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon