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2NYU
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BU of 2nyu by Molmil
Crystal Structure of Human FtsJ homolog 2 (E.coli) protein in complex with S-adenosylmethionine
Descriptor: Putative ribosomal RNA methyltransferase 2, S-ADENOSYLMETHIONINE
Authors:Dong, A, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-11-21
Release date:2006-12-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:The Crystal Structure of Human FtsJ homolog 2 (E.coli) protein in complex with AdoMet
To be Published
2O28
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BU of 2o28 by Molmil
Crystal Structure of GNPNAT1
Descriptor: 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, COENZYME A, Glucosamine 6-phosphate N-acetyltransferase
Authors:Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-11-29
Release date:2006-12-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Glucosamine-Phosphate N-Acetyltransferase 1
To be Published
2O07
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BU of 2o07 by Molmil
Human spermidine synthase
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, SPERMIDINE, Spermidine synthase
Authors:Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-11-27
Release date:2006-12-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure and mechanism of spermidine synthases.
Biochemistry, 46, 2007
2O05
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BU of 2o05 by Molmil
Human spermidine synthase
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Spermidine synthase
Authors:Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-11-27
Release date:2006-12-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanism of spermidine synthases.
Biochemistry, 46, 2007
2O0L
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BU of 2o0l by Molmil
Human spermidine synthase
Descriptor: 5'-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5'-DEOXYADENOSINE, Spermidine synthase
Authors:Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-11-27
Release date:2006-12-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structure and mechanism of spermidine synthases.
Biochemistry, 46, 2007
7DCA
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BU of 7dca by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase bound by xanthosine
Descriptor: 2,3-dihydroxanthosine, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-10-23
Release date:2021-09-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The C-terminal loop of Arabidopsis thaliana guanosine deaminase is essential to catalysis.
Chem.Commun.(Camb.), 57, 2021
7DBF
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BU of 7dbf by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase
Descriptor: Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-10-20
Release date:2021-09-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The C-terminal loop of Arabidopsis thaliana guanosine deaminase is essential to catalysis.
Chem.Commun.(Camb.), 57, 2021
7DC9
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BU of 7dc9 by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase mutant E82Q complex with guanosine
Descriptor: GUANOSINE, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-10-23
Release date:2021-09-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The C-terminal loop of Arabidopsis thaliana guanosine deaminase is essential to catalysis.
Chem.Commun.(Camb.), 57, 2021
7DCB
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BU of 7dcb by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase complexed with inosine
Descriptor: Guanosine deaminase, INOSINE, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-10-23
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DCW
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BU of 7dcw by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase complexed with adenosine
Descriptor: ADENOSINE, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-10-27
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DH1
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BU of 7dh1 by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase in reaction with N2-Methylguanosine
Descriptor: 2,3-dihydroxanthosine, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-11-12
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DGC
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BU of 7dgc by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase in reaction with 2'-O-Methylguanosine
Descriptor: 9-[(2R,3R,4R)-5-(hydroxymethyl)-3-methoxy-4-oxidanyl-oxolan-2-yl]-3H-purine-2,6-dione, Guanosine deaminase, SODIUM ION, ...
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-11-11
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DM6
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BU of 7dm6 by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase complexed with crotonoside
Descriptor: 6-azanyl-9-[(2R,3R,4S,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1H-purin-2-one, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-12-02
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DM5
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BU of 7dm5 by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase in reaction with guanosine
Descriptor: 2,3-dihydroxanthosine, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-12-02
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DQN
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BU of 7dqn by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase mutant Y185F complexed with guanosine
Descriptor: GUANOSINE, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-12-24
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
6L6S
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BU of 6l6s by Molmil
The structure of the UdgX mutant H109E crosslinked to single-stranded DNA
Descriptor: DNA (5'-D(P*TP*GP*(ORP)P*AP*GP*GP*CP*AP*TP*GP*C)-3'), IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein
Authors:Xie, W, Tu, J, Zeng, H.
Deposit date:2019-10-29
Release date:2020-11-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.06425953 Å)
Cite:Structural insights into an MsmUdgX mutant capable of both crosslinking and uracil excision capability.
DNA Repair (Amst), 97, 2021
6L5B
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BU of 6l5b by Molmil
The structure of the UdgX mutant H109E at a post-excision state
Descriptor: IRON/SULFUR CLUSTER, Uracil DNA glycosylase superfamily protein
Authors:Xie, W, Tu, J, Zeng, H.
Deposit date:2019-10-22
Release date:2020-10-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.00004983 Å)
Cite:Structural insights into an MsmUdgX mutant capable of both crosslinking and uracil excision capability.
DNA Repair (Amst), 97, 2021
6L5A
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BU of 6l5a by Molmil
The structure of the UdgX mutant H109E at a pre-excision state
Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, Uracil DNA glycosylase superfamily protein
Authors:Xie, W, Tu, J, Zeng, H.
Deposit date:2019-10-22
Release date:2020-10-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.80007327 Å)
Cite:Structural insights into an MsmUdgX mutant capable of both crosslinking and uracil excision capability.
DNA Repair (Amst), 97, 2021
6N31
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BU of 6n31 by Molmil
WD repeats of human WDR12
Descriptor: Ribosome biogenesis protein WDR12, UNKNOWN ATOM OR ION
Authors:Halabelian, L, Zeng, H, Tempel, W, Li, Y, Seitova, A, Hutchinson, A, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2018-11-14
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:WD repeats of human WDR12
To Be Published
6OEB
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BU of 6oeb by Molmil
Crystal structure of HMCES SRAP domain in complex with 3' overhang DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*CP*AP*GP*AP*CP*GP*TP*T)-3'), DNA (5'-D(*GP*TP*CP*TP*GP*G)-3'), ...
Authors:Halabelian, L, Ravichandran, M, Li, Y, Zeng, H, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2019-03-27
Release date:2019-04-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of HMCES interactions with abasic DNA and multivalent substrate recognition.
Nat.Struct.Mol.Biol., 26, 2019
6OOV
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BU of 6oov by Molmil
Crystal structure of HMCES SRAP domain in complex with palindromic 3' overhang DNA
Descriptor: DNA (5'-D(*CP*AP*AP*CP*GP*TP*TP*GP*TP*TP*TP*TP*T)-3'), Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein, UNKNOWN ATOM OR ION
Authors:Halabelian, L, Zeng, H, Li, Y, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2019-04-23
Release date:2019-05-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of HMCES SRAP domain in complex with palindromic 3' overhang DNA
To Be Published
6OEA
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BU of 6oea by Molmil
Crystal structure of HMCES SRAP domain in complex with longer 3' overhang DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*CP*AP*GP*AP*CP*GP*TP*TP*GP*TP*T)-3'), DNA (5'-D(*GP*TP*CP*TP*GP*G)-3'), ...
Authors:Halabelian, L, Ravichandran, M, Li, Y, Zeng, H, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2019-03-27
Release date:2019-04-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of HMCES interactions with abasic DNA and multivalent substrate recognition.
Nat.Struct.Mol.Biol., 26, 2019
8JYW
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BU of 8jyw by Molmil
Cryo-EM structure of the gasdermin pore from Trichoplax adhaerens
Descriptor: Gasdermin pore forming domain-containing protein
Authors:Hou, Y.J, Sun, Q, Zeng, H, Ding, J.
Deposit date:2023-07-04
Release date:2024-05-01
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cleavage-independent activation of ancient eukaryotic gasdermins and structural mechanisms.
Science, 2024
7W1Q
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BU of 7w1q by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase mutant E82Q complexed with 2'-O-methylguanosine
Descriptor: Guanosine deaminase, O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2021-11-19
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DOX
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BU of 7dox by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase in complex with m7G
Descriptor: 7-METHYLGUANOSINE, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-12-17
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Asymmetric Catalysis of Arabidopsis thaliana Guanosine Deaminase Revealed by Crystal Structures
To Be Published

219869

PDB entries from 2024-05-15

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