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1ZNV
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BU of 1znv by Molmil
How a His-metal finger endonuclease ColE7 binds and cleaves DNA with a transition metal ion cofactor
分子名称: Colicin E7, Colicin E7 immunity protein, NICKEL (II) ION, ...
著者Doudeva, L.G, Huang, H, Hsia, K.C, Shi, Z, Li, C.L, Shen, Y, Yuan, H.S.
登録日2005-05-12
公開日2006-03-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structural analysis and metal-dependent stability and activity studies of the ColE7 endonuclease domain in complex with DNA/Zn2+ or inhibitor/Ni2+
Protein Sci., 15, 2006
2AXC
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BU of 2axc by Molmil
Crystal structure of ColE7 translocation domain
分子名称: Colicin E7, GLYCEROL, SULFATE ION
著者Cheng, Y.S, Shi, Z, Doudeva, L.G, Yang, W.Z, Chak, K.F, Yuan, H.S.
登録日2005-09-04
公開日2006-03-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献High-resolution crystal structure of a truncated ColE7 translocation domain: implications for colicin transport across membranes
J.Mol.Biol., 356, 2006
4Y00
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BU of 4y00 by Molmil
Crystal Structure of Human TDP-43 RRM1 Domain with D169G Mutation in Complex with an Unmodified Single-stranded DNA
分子名称: DNA (5'-D(P*TP*TP*GP*AP*GP*CP*GP*T)-3'), TAR DNA-binding protein 43
著者Chiang, C.H, Kuo, P.H, Yang, W.Z, Yuan, H.S.
登録日2015-02-05
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural analysis of disease-related TDP-43 D169G mutation: linking enhanced stability and caspase cleavage efficiency to protein accumulation
Sci Rep, 6, 2016
4Y0F
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BU of 4y0f by Molmil
Crystal Structure of Human TDP-43 RRM1 Domain in Complex with an Unmodified Single-stranded DNA
分子名称: DNA (5'-D(*GP*TP*TP*GP*AP*GP*CP*GP*TP*T)-3'), TAR DNA-binding protein 43
著者Chiang, C.H, Kuo, P.H, Doudeva, L.G, Wang, Y.T, Yuan, H.S.
登録日2015-02-06
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.648 Å)
主引用文献Structural analysis of disease-related TDP-43 D169G mutation: linking enhanced stability and caspase cleavage efficiency to protein accumulation
Sci Rep, 6, 2016
3V9W
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BU of 3v9w by Molmil
Crystal structure of RNase T in complex with a preferred ssDNA (TTA) with two Mg in the active site
分子名称: COBALT (II) ION, DNA (5'-D(*GP*CP*TP*TP*A)-3'), MAGNESIUM ION, ...
著者Hsiao, Y.-Y, Yuan, H.S.
登録日2011-12-28
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.702 Å)
主引用文献How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
3V9Z
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BU of 3v9z by Molmil
Crystal structure of RNase T in complex with a product ssDNA (ACC) with one Mg in the active site
分子名称: COBALT (II) ION, DNA (5'-D(*TP*TP*AP*CP*AP*CP*C)-3'), MAGNESIUM ION, ...
著者Hsiao, Y.-Y, Yuan, H.S.
登録日2011-12-28
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
3V9S
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BU of 3v9s by Molmil
Crystal structure of RNase T in complex with a product ssDNA (AAC) with one Mg in the active site
分子名称: COBALT (II) ION, DNA (5'-D(*TP*TP*AP*CP*AP*AP*C)-3'), MAGNESIUM ION, ...
著者Hsiao, Y.-Y, Yuan, H.S.
登録日2011-12-28
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
3V9U
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BU of 3v9u by Molmil
Crystal structure of RNase T in complex with a preferred ssDNA (AAT) with two Mg in the active site
分子名称: COBALT (II) ION, DNA (5'-D(*TP*TP*AP*CP*AP*AP*T)-3'), MAGNESIUM ION, ...
著者Hsiao, Y.-Y, Yuan, H.S.
登録日2011-12-28
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.298 Å)
主引用文献How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
3VA3
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BU of 3va3 by Molmil
Crystal structure of RNase T in complex with a duplex DNA product (stem loop DNA with 2 nucleotide 3' overhang)
分子名称: COBALT (II) ION, DNA (5'-D(*GP*GP*CP*CP*CP*TP*CP*TP*TP*TP*AP*GP*GP*GP*CP*CP*TP*T)-3'), Ribonuclease T
著者Hsiao, Y.-Y, Yuan, H.S.
登録日2011-12-28
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.714 Å)
主引用文献How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
3V9X
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BU of 3v9x by Molmil
Crystal structure of RNase T in complex with a preferred ssDNA (AAA) with two Mg in the active site
分子名称: DNA (5'-D(*TP*TP*AP*TP*AP*AP*A)-3'), MAGNESIUM ION, Ribonuclease T
著者Hsiao, Y.-Y, Yuan, H.S.
登録日2011-12-28
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
3VA0
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BU of 3va0 by Molmil
Crystal structure of RNase T in complex with a di-nucleotide product (GG) with one Mg in the active site
分子名称: COBALT (II) ION, DNA (5'-D(*GP*G)-3'), MAGNESIUM ION, ...
著者Hsiao, Y.-Y, Yuan, H.S.
登録日2011-12-28
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
3FBD
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BU of 3fbd by Molmil
Crystal structure of the nuclease domain of COLE7(D493Q mutant) in complex with an 18-BP duplex DNA
分子名称: 5'-D(*DGP*DGP*DAP*DAP*DTP*DTP*DCP*DGP*DAP*DTP*DCP*DGP*DAP*DAP*DTP*DTP*DCP*DC)-3', Colicin-E7
著者Wang, Y.T, Doudeva, L.G, Yuan, H.S.
登録日2008-11-19
公開日2009-11-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Redesign of high-affinity nonspecific nucleases with altered sequence preference
To be Published
3HKM
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BU of 3hkm by Molmil
Crystal Structure of rice(Oryza sativa) Rrp46
分子名称: Os03g0854200 protein
著者Yang, C.-C, Wang, Y.-T, Hsiao, Y.-Y, Doudeva, L.G, Yuan, H.S.
登録日2009-05-25
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9845 Å)
主引用文献Structural and biochemical characterization of CRN-5 and Rrp46: an exosome component participating in apoptotic DNA degradation
Rna, 16, 2010
3TAT
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BU of 3tat by Molmil
TYROSINE AMINOTRANSFERASE FROM E. COLI
分子名称: PYRIDOXAL-5'-PHOSPHATE, TYROSINE AMINOTRANSFERASE
著者Ko, T.P, Yang, W.Z, Wu, S.P, Tsai, H, Yuan, H.S.
登録日1998-08-12
公開日1999-08-12
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystallization and preliminary crystallographic analysis of the Escherichia coli tyrosine aminotransferase.
Acta Crystallogr.,Sect.D, 55, 1999
3U1K
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BU of 3u1k by Molmil
Crystal structure of human PNPase
分子名称: CITRIC ACID, Polyribonucleotide nucleotidyltransferase 1, mitochondrial
著者Lin, C.L, Yuan, H.S.
登録日2011-09-30
公開日2012-02-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structure of human polynucleotide phosphorylase: insights into its domain function in RNA binding and degradation
Nucleic Acids Res., 40, 2012
5GKP
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BU of 5gkp by Molmil
Crystal structure of the EndoG worm homologue CPS-6 H148A/F122A in complex with DNA
分子名称: DNA (5'-D(*TP*TP*TP*TP*T)-3'), Endonuclease G, mitochondrial, ...
著者Lin, J.L, Yuan, H.S.
登録日2016-07-05
公開日2016-11-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of endonuclease G in complex with DNA reveals how it nonspecifically degrades DNA as a homodimer.
Nucleic Acids Res., 44, 2016
1ETQ
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BU of 1etq by Molmil
THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT R71Y
分子名称: FACTOR FOR INVERSION STIMULATION
著者Cheng, Y.S, Yang, W.Z, Johnson, R.C, Yuan, H.S.
登録日2000-04-13
公開日2000-10-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural analysis of the transcriptional activation on Fis: crystal structures of six Fis mutants with different activation properties.
J.Mol.Biol., 302, 2000
1ETV
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BU of 1etv by Molmil
THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT G72A
分子名称: FACTOR FOR INVERSION STIMULATION
著者Cheng, Y.S, Yang, W.Z, Johnson, R.C, Yuan, H.S.
登録日2000-04-13
公開日2000-10-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural analysis of the transcriptional activation on Fis: crystal structures of six Fis mutants with different activation properties.
J.Mol.Biol., 302, 2000
1ETW
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BU of 1etw by Molmil
THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT G72D
分子名称: FACTOR FOR INVERSION STIMULATION
著者Cheng, Y.S, Yang, W.Z, Johnson, R.C, Yuan, H.S.
登録日2000-04-13
公開日2000-10-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural analysis of the transcriptional activation on Fis: crystal structures of six Fis mutants with different activation properties.
J.Mol.Biol., 302, 2000
1F36
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BU of 1f36 by Molmil
THE CRYSTAL STRUCTURE OF FIS MUTANT K36E REVEALS THAT THE TRANSACTIVATION REGION OF THE FIS PROTEIN CONTAINS EXTENDED MOBILE BETA-HAIRPIN ARMS
分子名称: FIS
著者Safo, M.K, Yuan, H.S.
登録日1997-06-20
公開日1997-12-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The transactivation region of the fis protein that controls site-specific DNA inversion contains extended mobile beta-hairpin arms.
EMBO J., 16, 1997
4P5U
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BU of 4p5u by Molmil
Crystal structure of TatD
分子名称: Tat-linked quality control protein TatD
著者Chen, Y, Li, C.-L, Hsiao, Y.-Y, Duh, Y, Yuan, H.S.
登録日2014-03-20
公開日2014-08-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and function of TatD exonuclease in DNA repair.
Nucleic Acids Res., 42, 2014
4PE8
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BU of 4pe8 by Molmil
Crystal structure of TatD in complex with trinucleotide DNA
分子名称: DNA (5'-D(*GP*CP*T)-3'), Tat-linked quality control protein TatD
著者Chen, Y, Li, C.-L, Hsiao, Y.-Y, Duh, Y, Yuan, H.S.
登録日2014-04-23
公開日2014-08-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.894 Å)
主引用文献Structure and function of TatD exonuclease in DNA repair.
Nucleic Acids Res., 42, 2014
7CEI
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BU of 7cei by Molmil
THE ENDONUCLEASE DOMAIN OF COLICIN E7 IN COMPLEX WITH ITS INHIBITOR IM7 PROTEIN
分子名称: PROTEIN (COLICIN E7 IMMUNITY PROTEIN), ZINC ION
著者Ko, T.P, Liao, C.C, Ku, W.Y, Chak, K.F, Yuan, H.S.
登録日1998-09-17
公開日1999-09-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of the DNase domain of colicin E7 in complex with its inhibitor Im7 protein.
Structure Fold.Des., 7, 1999
4IUF
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BU of 4iuf by Molmil
Crystal Structure of Human TDP-43 RRM1 Domain in Complex with a Single-stranded DNA
分子名称: 5'-D(*GP*TP*TP*GP*(XUA)P*GP*CP*GP*T)-3', TAR DNA-binding protein 43
著者Kuo, P.H, Doudeva, L.G, Wang, Y.T, Yang, W.Z, Yuan, H.S.
登録日2013-01-21
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.752 Å)
主引用文献The crystal structure of TDP-43 RRM1-DNA complex reveals the specific recognition for UG- and TG-rich nucleic acids.
Nucleic Acids Res., 42, 2014
4KAZ
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BU of 4kaz by Molmil
Crystal structure of RNase T in complex with a Y structured DNA
分子名称: DNA (5'-D(*TP*TP*GP*GP*CP*CP*CP*TP*CP*TP*TP*TP*AP*GP*GP*GP*CP*CP*CP*C)-3'), MAGNESIUM ION, Ribonuclease T
著者Hsiao, Y.-Y, Yuan, H.S.
登録日2013-04-23
公開日2014-03-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural insights into DNA repair by RNase T--an exonuclease processing 3' end of structured DNA in repair pathways.
Plos Biol., 12, 2014

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