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6H4N
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BU of 6h4n by Molmil
Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ...
著者Beckert, B, Turk, M, Czech, A, Berninghausen, O, Beckmann, R, Ignatova, Z, Plitzko, J, Wilson, N.D.
登録日2018-07-22
公開日2018-09-05
最終更新日2018-10-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1.
Nat Microbiol, 3, 2018
5MGP
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BU of 5mgp by Molmil
Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Huter, P, Mueller, C, Beckert, B, Arenz, S, Berninghausen, O, Beckmann, R, Wilson, N.D.
登録日2016-11-21
公開日2016-12-14
最終更新日2017-08-30
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for ArfA-RF2-mediated translation termination on mRNAs lacking stop codons.
Nature, 541, 2017
4V9A
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BU of 4v9a by Molmil
Crystal Structure of the 70S ribosome with tetracycline.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ...
著者Jenner, L, Yusupov, M, Yusupova, G.
登録日2012-07-18
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.2999 Å)
主引用文献Structural basis for potent inhibitory activity of the antibiotic tigecycline during protein synthesis.
Proc.Natl.Acad.Sci.USA, 110, 2013
4V9B
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BU of 4v9b by Molmil
Crystal Structure of the 70S ribosome with tigecycline.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ...
著者Jenner, L, Yusupov, M, Yusupova, G.
登録日2012-07-18
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for potent inhibitory activity of the antibiotic tigecycline during protein synthesis.
Proc.Natl.Acad.Sci.USA, 110, 2013
6G15
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BU of 6g15 by Molmil
Crystal structure of pppGpp bound RbgA from S. aureus
分子名称: Ribosome biogenesis GTPase A, guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)
著者Pausch, P, Bange, G.
登録日2018-03-20
公開日2018-11-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis for (p)ppGpp-mediated inhibition of the GTPase RbgA.
J. Biol. Chem., 293, 2018
4PSO
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BU of 4pso by Molmil
Crystal structure of apeThermo-DBP-RP2 bound to ssDNA dT10
分子名称: PHOSPHATE ION, polydeoxyribonucleotide, ssDNA binding protein
著者Gahlei, H, von Moeller, H, Eppers, D, Loll, B, Wahl, M.C.
登録日2014-03-07
公開日2014-04-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein.
Nucleic Acids Res., 42, 2014
4PSM
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BU of 4psm by Molmil
Crystal structure of pfuThermo-DBP-RP1 (crystal form II)
分子名称: SULFATE ION, ssDNA binding protein
著者Gahlei, H, von Moeller, H, Eppers, D, Loll, B, Wahl, M.C.
登録日2014-03-07
公開日2014-04-30
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein.
Nucleic Acids Res., 42, 2014
4PSN
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BU of 4psn by Molmil
Crystal structure of apeThermo-DBP-RP2
分子名称: GLYCEROL, IMIDAZOLE, ssDNA binding protein
著者Gahlei, H, von Moeller, H, Eppers, D, Loll, B, Wahl, M.C.
登録日2014-03-07
公開日2014-04-30
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein.
Nucleic Acids Res., 42, 2014
4TOI
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BU of 4toi by Molmil
Crystal structure of E.coli ribosomal protein S2 in complex with N-terminal domain of S1
分子名称: 30S ribosomal protein S2,Ribosomal protein S1, ZINC ION
著者Grishkovskaya, I, Byrgazov, K, Moll, I, Djinovic-Carugo, K.
登録日2014-06-05
公開日2014-12-31
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for the interaction of protein S1 with the Escherichia coli ribosome.
Nucleic Acids Res., 43, 2015
6G12
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BU of 6g12 by Molmil
Crystal structure of GMPPNP bound RbgA from S. aureus
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ribosome biogenesis GTPase A
著者Pausch, P, Bange, G.
登録日2018-03-20
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.929 Å)
主引用文献Structural basis for (p)ppGpp-mediated inhibition of the GTPase RbgA.
J. Biol. Chem., 293, 2018
6G14
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BU of 6g14 by Molmil
Crystal structure of ppGpp bound RbgA from S. aureus
分子名称: GUANOSINE-5',3'-TETRAPHOSPHATE, Ribosome biogenesis GTPase A
著者Pausch, P, Bange, G.
登録日2018-03-20
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for (p)ppGpp-mediated inhibition of the GTPase RbgA.
J. Biol. Chem., 293, 2018
6G0Z
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BU of 6g0z by Molmil
Crystal structure of GDP bound RbgA from S. aureus
分子名称: GUANOSINE-5'-DIPHOSPHATE, Ribosome biogenesis GTPase A
著者Pausch, P, Bange, G.
登録日2018-03-20
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for (p)ppGpp-mediated inhibition of the GTPase RbgA.
J. Biol. Chem., 293, 2018
2XL1
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BU of 2xl1 by Molmil
Structural basis of translational stalling by human cytomegalovirus (hCMV) and fungal arginine attenuator peptide (AAP)
分子名称: ARGININE ATTENUATOR PEPTIDE
著者Meyer, N.H, Sattler, M.
登録日2010-07-15
公開日2010-10-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Basis for Translational Stalling by Human Cytomegalovirus and Fungal Arginine Attenuator Peptide.
Mol.Cell, 40, 2010
6YXA
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BU of 6yxa by Molmil
Structure of the bifunctional Rel enzyme from B. subtilis
分子名称: GTP pyrophosphokinase, MANGANESE (II) ION
著者Pausch, P, Bange, G.
登録日2020-04-30
公開日2020-09-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.95 Å)
主引用文献Structural Basis for Regulation of the Opposing (p)ppGpp Synthetase and Hydrolase within the Stringent Response Orchestrator Rel.
Cell Rep, 32, 2020
5GAK
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BU of 5gak by Molmil
Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A
分子名称: 25S rRNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, 5.8S rRNA, ...
著者Schmidt, C, Becker, T.
登録日2015-12-09
公開日2016-02-24
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.88 Å)
主引用文献Structure of the hypusinylated eukaryotic translation factor eIF-5A bound to the ribosome.
Nucleic Acids Res., 44, 2016
2DYJ
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BU of 2dyj by Molmil
Crystal structure of ribosome-binding factor A from Thermus thermophilus HB8
分子名称: Ribosome-binding factor A
著者Kawazoe, M, Takemoto, C, Nakayama-Ushikoshi, R, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-14
公開日2007-03-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural aspects of RbfA action during small ribosomal subunit assembly.
Mol.Cell, 28, 2007
2HHH
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BU of 2hhh by Molmil
Crystal structure of kasugamycin bound to the 30S ribosomal subunit
分子名称: (1S,2R,3S,4R,5S,6S)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL 2-AMINO-4-{[CARBOXY(IMINO)METHYL]AMINO}-2,3,4,6-TETRADEOXY-ALPHA-D-ARABINO-HEXOPYRANOSIDE, 16S ribosomal RNA, 30S ribosomal protein S10, ...
著者Schluenzen, F.
登録日2006-06-28
公開日2006-09-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献The antibiotic kasugamycin mimics mRNA nucleotides to destabilize tRNA binding and inhibit canonical translation initiation.
Nat.Struct.Mol.Biol., 13, 2006
1X18
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BU of 1x18 by Molmil
Contact sites of ERA GTPase on the THERMUS THERMOPHILUS 30S SUBUNIT
分子名称: 30S ribosomal protein S11, 30S ribosomal protein S18, 30S ribosomal protein S2, ...
著者Sharma, M.R, Barat, C, Agrawal, R.K.
登録日2005-04-02
公開日2005-05-17
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (13.5 Å)
主引用文献Interaction of Era with the 30S Ribosomal Subunit Implications for 30S Subunit Assembly
Mol.Cell, 18, 2005
1X1L
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BU of 1x1l by Molmil
Interaction of ERA,a GTPase protein, with the 3'minor domain of the 16S rRNA within the THERMUS THERMOPHILUS 30S subunit.
分子名称: GTP-binding protein era, RNA (130-MER)
著者Sharma, M.R, Barat, C, Agrawal, R.K.
登録日2005-04-06
公開日2005-05-17
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (13.5 Å)
主引用文献Interaction of Era with the 30S Ribosomal Subunit Implications for 30S Subunit Assembly
Mol.Cell, 18, 2005
2ZM6
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BU of 2zm6 by Molmil
Crystal structure of the Thermus thermophilus 30S ribosomal subunit
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Kaminishi, T, Wang, H, Kawazoe, M, Ishii, R, Schluenzen, F, Hanawa-Suetsugu, K, Wilson, D.N, Nomura, M, Takemoto, C, Shirouzu, M, Fucini, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-04-11
公開日2009-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of the Thermus thermophilus 30S ribosomal subunit
To be Published
1P9Y
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BU of 1p9y by Molmil
Ribosome binding of E. coli Trigger Factor mutant F44L.
分子名称: ACETIC ACID, Trigger factor
著者Kristensen, O, Gajhede, M.
登録日2003-05-13
公開日2003-12-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Chaperone binding at the ribosomal exit tunnel.
Structure, 11, 2003
1OMS
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BU of 1oms by Molmil
Structure determination by MAD: E.coli Trigger Factor binding at the ribosomal exit tunnel.
分子名称: GLYCEROL, SULFATE ION, SULFUR DIOXIDE, ...
著者Kristensen, O, Gajhede, M.
登録日2003-02-26
公開日2003-12-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Chaperone binding at the ribosomal exit tunnel.
Structure, 11, 2003

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