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7F8T
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BU of 7f8t by Molmil
Re-refinement of the 2XRY X-ray structure of archaeal class II CPD photolyase from Methanosarcina mazei
Descriptor: Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Maestre-Reyna, M, Yang, C.-H, Huang, W.C, Nango, E, Gusti-Ngurah-Putu, E.-P, Franz-Badur, S, Wu, W.-J, Wu, H.-Y, Wang, P.-H, Liao, J.-H, Lee, C.-C, Huang, K.-F, Chang, Y.-K, Weng, J.-H, Sugahara, M, Owada, S, Joti, Y, Tanaka, R, Tono, K, Kiontke, S, Yamamoto, J, Iwata, S, Essen, L.-O, Bessho, Y, Tsai, M.-D.
Deposit date:2021-07-02
Release date:2022-03-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
Nat.Chem., 14, 2022
5ZM0
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BU of 5zm0 by Molmil
X-ray structure of animal-like Cryptochrome from Chlamydomonas reinhardtii
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Cryptochrome photoreceptor, ...
Authors:Franz, S, Ignatz, E, Wenzel, S, Zielosko, H, Gusti Ngurah Putu, E.P, Maestre-Reyna, M, Tsai, M.-D, Yamamoto, J, Mittag, M, Essen, L.-O.
Deposit date:2018-03-31
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the bifunctional cryptochrome aCRY from Chlamydomonas reinhardtii
Nucleic Acids Res., 46, 2018
1A5E
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BU of 1a5e by Molmil
SOLUTION NMR STRUCTURE OF TUMOR SUPPRESSOR P16INK4A, 18 STRUCTURES
Descriptor: TUMOR SUPPRESSOR P16INK4A
Authors:Byeon, I.-J.L, Li, J, Ericson, K, Selby, T.L, Tevelev, A, Kim, H.-J, O'Maille, P, Tsai, M.-D.
Deposit date:1998-02-13
Release date:1999-08-13
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Tumor suppressor p16INK4A: determination of solution structure and analyses of its interaction with cyclin-dependent kinase 4.
Mol.Cell, 1, 1998
1BVM
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BU of 1bvm by Molmil
SOLUTION NMR STRUCTURE OF BOVINE PANCREATIC PHOSPHOLIPASE A2, 20 STRUCTURES
Descriptor: PROTEIN (PHOSPHOLIPASE A2)
Authors:Yuan, C.-H, Byeon, I.-J.L, Li, Y, Tsai, M.-D.
Deposit date:1998-09-14
Release date:1999-09-16
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structural analysis of phospholipase A2 from functional perspective. 1. Functionally relevant solution structure and roles of the hydrogen-bonding network.
Biochemistry, 38, 1999
1BU9
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BU of 1bu9 by Molmil
SOLUTION STRUCTURE OF P18-INK4C, 21 STRUCTURES
Descriptor: PROTEIN (CYCLIN-DEPENDENT KINASE 6 INHIBITOR)
Authors:Byeon, I.-J.L, Li, J, Tsai, M.-D.
Deposit date:1998-09-15
Release date:1999-09-13
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Tumor suppressor INK4: determination of the solution structure of p18INK4C and demonstration of the functional significance of loops in p18INK4C and p16INK4A.
Biochemistry, 38, 1999
8IO9
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BU of 8io9 by Molmil
Cryo-EM structure of cyanobacteria phosphoketolase complexed with AMPPNP in dodecameric assembly
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Probable phosphoketolase, ...
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-03-10
Release date:2023-06-28
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.36 Å)
Cite:An ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria.
Nat Metab, 5, 2023
8IOA
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BU of 8ioa by Molmil
Cryo-EM structure of cyanobacteria phosphoketolase
Descriptor: MAGNESIUM ION, Probable phosphoketolase, THIAMINE DIPHOSPHATE
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-03-10
Release date:2023-06-28
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:An ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria.
Nat Metab, 5, 2023
8IO7
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BU of 8io7 by Molmil
Cryo-EM structure of phosphoketolase from Bifidobacterium longum in dimeric assembly
Descriptor: MAGNESIUM ION, THIAMINE DIPHOSPHATE, Xylulose5phosphatefructose6phosphate phosphoketolase
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-03-10
Release date:2023-06-28
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.62 Å)
Cite:An ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria.
Nat Metab, 5, 2023
8IO8
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BU of 8io8 by Molmil
Cryo-EM structure of cyanobacteria phosphoketolase complexed with AMPPNPin dimeric assembly
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Probable phosphoketolase, ...
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-03-10
Release date:2023-06-28
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.17 Å)
Cite:An ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria.
Nat Metab, 5, 2023
8IO6
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BU of 8io6 by Molmil
Cryo-EM structure of phosphoketolase from Bifidobacterium longum in octameric assembly
Descriptor: MAGNESIUM ION, THIAMINE DIPHOSPHATE, Xylulose5phosphatefructose6phosphate phosphoketolase
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-03-10
Release date:2023-06-28
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:An ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria.
Nat Metab, 5, 2023
8IOE
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BU of 8ioe by Molmil
Cryo-EM structure of cyanobacteria phosphoketolase in dodecameric assembly
Descriptor: MAGNESIUM ION, Probable phosphoketolase, THIAMINE DIPHOSPHATE
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-03-11
Release date:2023-06-28
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:An ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria.
Nat Metab, 5, 2023
8J89
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BU of 8j89 by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIa
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J8B
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BU of 8j8b by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIa
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J87
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BU of 8j87 by Molmil
Asfv topoisomerase 2 - apo conformer Ia
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8JA2
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BU of 8ja2 by Molmil
ASFV Topoisomerase ATPase domain in complex with AMP-PNP and Mg2+
Descriptor: DNA topoisomerase 2, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Pang, A.H, Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J8C
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BU of 8j8c by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIb
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J9V
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BU of 8j9v by Molmil
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and etoposide (EDI-1)
Descriptor: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(*GP*AP*GP*GP*TP*AP*TP*GP*TP*AP*GP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*CP*GP*CP*CP*TP*AP*CP*AP*TP*AP*CP*CP*TP*C)-3'), ...
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J88
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BU of 8j88 by Molmil
Asfv topoisomerase 2 - apo conformer Ib
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J9W
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BU of 8j9w by Molmil
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02bDNA and etoposide (EDI-2)
Descriptor: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(*AP*AP*GP*AP*AP*CP*TP*CP*TP*GP*TP*AP*G)-3'), DNA (5'-D(*CP*AP*TP*GP*CP*TP*AP*CP*AP*GP*AP*GP*TP*TP*CP*TP*T)-3'), ...
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J8A
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BU of 8j8a by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIb
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J9X
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BU of 8j9x by Molmil
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and m-AMSA (EDI-3)
Descriptor: DNA (5'-D(*GP*AP*GP*GP*TP*AP*TP*GP*TP*AP*GP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*CP*GP*CP*CP*TP*AP*CP*AP*TP*AP*CP*CP*TP*C)-3'), DNA topoisomerase 2, ...
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8JA1
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BU of 8ja1 by Molmil
ASFV Topoisomerase ATPase domain in complex with AMP-PNP and Mg2+ (oxidized form)
Descriptor: DNA topoisomerase 2, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Chang, C.-W, Pang, A.H, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
1KVW
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BU of 1kvw by Molmil
CARBOXYLIC ESTER HYDROLASE, SINGLE MUTANT H48Q OF BOVINE PANCREATIC PLA2 ENZYME
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Sundaralingam, M.
Deposit date:1998-04-24
Release date:1998-11-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of the catalytic site mutants D99A and H48Q and the calcium-loop mutant D49E of phospholipase A2.
Acta Crystallogr.,Sect.D, 55, 1999
1KVY
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BU of 1kvy by Molmil
CARBOXYLIC ESTER HYDROLASE, SINGLE MUTANT D49E COORDINATED TO CALCIUM
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Sundaralingam, M.
Deposit date:1998-04-29
Release date:1998-11-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of the catalytic site mutants D99A and H48Q and the calcium-loop mutant D49E of phospholipase A2.
Acta Crystallogr.,Sect.D, 55, 1999
1KVX
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BU of 1kvx by Molmil
CARBOXYLIC ESTER HYDROLASE, SINGLE MUTANT D99A OF BOVINE PANCREATIC PLA2, 1.9 A ORTHORHOMBIC FORM
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Sundaralingam, M.
Deposit date:1998-04-28
Release date:1998-11-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of the catalytic site mutants D99A and H48Q and the calcium-loop mutant D49E of phospholipase A2.
Acta Crystallogr.,Sect.D, 55, 1999

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