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3W6O
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BU of 3w6o by Molmil
Crystal structure of human Dlp1 in complex with GMP-PCP
分子名称: CALCIUM ION, Dynamin-1-like protein, MAGNESIUM ION, ...
著者Kishida, H, Sugio, S.
登録日2013-02-17
公開日2014-02-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of GTPase domain fused with minimal stalks from human dynamin-1-like protein (Dlp1) in complex with several nucleotide analogues
CURR TOP PEPT PROTEIN RES., 14, 2013
3WD7
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BU of 3wd7 by Molmil
Type III polyketide synthase
分子名称: COENZYME A, NICKEL (II) ION, SULFATE ION, ...
著者Mori, T, Shimokawa, Y, Matsui, T, Kato, R, Sugio, S, Morita, H, Abe, I.
登録日2013-06-10
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Cloning, characterization, and crystal structure analysis of novel type III polyketide synthases from Citrus microcarpa
To be Published
2D39
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BU of 2d39 by Molmil
Trivalent Recognition Unit of Innate Immunity System; Crystal Structure of human M-ficolin Fibrinogen-like Domain
分子名称: CALCIUM ION, Ficolin-1
著者Tanio, M, Kondo, S, Sugio, S, Kohno, T.
登録日2005-09-26
公開日2006-12-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Trivalent recognition unit of innate immunity system; crystal structure of trimeric human m-ficolin fibrinogen-like domain
J.Biol.Chem., 282, 2007
2ZJZ
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BU of 2zjz by Molmil
Structure of the K349P mutant of Gi alpha 1 subunit bound to GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i), alpha-1 subunit
著者Morikawa, T, Muroya, A, Sugio, S, Wakamatsu, K, Kohno, T.
登録日2008-03-11
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献How GPCRs activate G proteins: Structural changes from C-terminal tail to GDP binding pocket
To be Published
2ZJY
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BU of 2zjy by Molmil
Structure of the K349P mutant of Gi alpha 1 subunit bound to ALF4 and GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i), alpha-1 subunit, ...
著者Morikawa, T, Muroya, A, Sugio, S, Wakamatsu, K, Kohno, T.
登録日2008-03-11
公開日2009-03-24
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献How GPCRs activate G proteins: Structural changes form C-terminal tail to GDP binding pocket
To be Published
3A5R
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BU of 3a5r by Molmil
Benzalacetone synthase from Rheum palmatum complexed with 4-coumaroyl-primed monoketide intermediate
分子名称: 4'-HYDROXYCINNAMIC ACID, Benzalacetone synthase
著者Morita, H, Kato, R, Abe, I, Sugio, S, Kohno, T.
登録日2009-08-10
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A structure-based mechanism for benzalacetone synthase from Rheum palmatum
Proc.Natl.Acad.Sci.USA, 107, 2010
3A5Q
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BU of 3a5q by Molmil
Benzalacetone synthase from Rheum palmatum
分子名称: Benzalacetone synthase
著者Morita, H, Kato, R, Abe, I, Sugio, S, Kohno, T.
登録日2009-08-10
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A structure-based mechanism for benzalacetone synthase from Rheum palmatum
Proc.Natl.Acad.Sci.USA, 107, 2010
3A5S
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BU of 3a5s by Molmil
Benzalacetone synthase (I207L/L208F)
分子名称: Benzalacetone synthase
著者Morita, H, Kato, R, Abe, I, Sugio, S, Kohno, T.
登録日2009-08-10
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A structure-based mechanism for benzalacetone synthase from Rheum palmatum
Proc.Natl.Acad.Sci.USA, 107, 2010
3ALE
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BU of 3ale by Molmil
A type III polyketide synthase that produces diarylheptanoid
分子名称: Os07g0271500 protein
著者Morita, H, Kato, R, Sugio, S, Abe, I.
登録日2010-08-03
公開日2010-11-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for the one-pot formation of the diarylheptanoid scaffold by curcuminoid synthase from Oryza sativa
Proc.Natl.Acad.Sci.USA, 107, 2010
1TPV
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BU of 1tpv by Molmil
S96P CHANGE IS A SECOND-SITE SUPPRESSOR FOR H95N SLUGGISH MUTANT TRIOSEPHOSPHATE ISOMERASE
分子名称: PHOSPHOGLYCOLOHYDROXAMIC ACID, TRIOSEPHOSPHATE ISOMERASE
著者Zhang, Z, Sugio, S, Komives, E.A, Liu, K.D, Stock, A.M, Narayana, N, Xuong, Ng.H, Knowles, J.R, Petsko, G.A, Ringe, D.
登録日1994-11-07
公開日1995-04-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structural basis for pseudoreversion of the H95N lesion by the secondary S96P mutation in triosephosphate isomerase.
Biochemistry, 35, 1996
1TPW
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BU of 1tpw by Molmil
TRIOSEPHOSPHATE ISOMERASE DRINKS WATER TO KEEP HEALTHY
分子名称: PHOSPHOGLYCOLOHYDROXAMIC ACID, TRIOSEPHOSPHATE ISOMERASE
著者Zhang, Z, Sugio, S, Komives, E.A, Liu, K.D, Stock, A.M, Narayana, N, Xuong, Ng.H, Knowles, J.R, Petsko, G.A, Ringe, D.
登録日1994-11-07
公開日1995-04-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The role of water in the catalytic efficiency of triosephosphate isomerase.
Biochemistry, 38, 1999
1TPH
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BU of 1tph by Molmil
1.8 ANGSTROMS CRYSTAL STRUCTURE OF WILD TYPE CHICKEN TRIOSEPHOSPHATE ISOMERASE-PHOSPHOGLYCOLOHYDROXAMATE COMPLEX
分子名称: PHOSPHOGLYCOLOHYDROXAMIC ACID, TRIOSEPHOSPHATE ISOMERASE
著者Zhang, Z, Sugio, S, Komives, E.A, Liu, K.D, Knowles, J.R, Petsko, G.A, Ringe, D.
登録日1993-12-22
公開日1994-04-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of recombinant chicken triosephosphate isomerase-phosphoglycolohydroxamate complex at 1.8-A resolution.
Biochemistry, 33, 1994
1TPU
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BU of 1tpu by Molmil
S96P CHANGE IS A SECOND-SITE SUPPRESSOR FOR H95N SLUGGISH MUTANT TRIOSEPHOSPHATE ISOMERASE
分子名称: PHOSPHOGLYCOLOHYDROXAMIC ACID, TRIOSEPHOSPHATE ISOMERASE
著者Zhang, Z, Sugio, S, Komives, E.A, Liu, K.D, Stock, A.M, Narayana, N, Xuong, Ng.H, Knowles, J.R, Petsko, G.A, Ringe, D.
登録日1994-11-07
公開日1995-04-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structural basis for pseudoreversion of the H95N lesion by the secondary S96P mutation in triosephosphate isomerase.
Biochemistry, 35, 1996
2E1M
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BU of 2e1m by Molmil
Crystal Structure of L-Glutamate Oxidase from Streptomyces sp. X-119-6
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, L-glutamate oxidase, PHOSPHATE ION
著者Sasaki, C, Kashima, A, Sakaguchi, C, Mizuno, H, Arima, J, Kusakabe, H, Tamura, T, Sugio, S, Inagaki, K.
登録日2006-10-26
公開日2007-11-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural characterization of l-glutamate oxidase from Streptomyces sp. X-119-6
Febs J., 276, 2009
2DY3
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BU of 2dy3 by Molmil
Crystal Structure of alanine racemase from Corynebacterium glutamicum
分子名称: Alanine racemase, PYRIDOXAL-5'-PHOSPHATE
著者Miyaguchi, I, Sasaki, C, Kato, R, Oikawa, T, Sugio, S.
登録日2006-09-05
公開日2007-09-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Alanine Racemase from Corynebacterium glutamicum at 2.1 A resolution
To be Published
3DAA
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BU of 3daa by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF D-AMINO ACID AMINOTRANSFERASE INACTIVATED BY PYRIDOXYL-D-ALANINE
分子名称: D-AMINO ACID AMINOTRANSFERASE, N-(5'-PHOSPHOPYRIDOXYL)-D-ALANINE
著者Peisach, D, Chipman, D.M, Ringe, D.
登録日1998-01-20
公開日1998-04-29
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic study of steps along the reaction pathway of D-amino acid aminotransferase.
Biochemistry, 37, 1998
4DAA
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BU of 4daa by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF D-AMINO ACID AMINOTRANSFERASE IN PYRIDOXAL-5'-PHOSPHATE (PLP) FORM
分子名称: D-AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
著者Peisach, D, Chipman, D.M, Ringe, D.
登録日1998-01-26
公開日1998-04-29
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic study of steps along the reaction pathway of D-amino acid aminotransferase.
Biochemistry, 37, 1998
2D52
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BU of 2d52 by Molmil
Pentaketide chromone synthase (M207G mutant complexed with Coa)
分子名称: COENZYME A, pentaketide chromone synthase
著者Kohno, T, Morita, H.
登録日2005-10-27
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Insight into Chain-Length Control and Product Specificity of Pentaketide Chromone Synthase from Aloe arborescens
Chem.Biol., 14, 2007
2D51
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BU of 2d51 by Molmil
Pentaketide chromone synthase (M207G mutant)
分子名称: pentaketide chromone synthase
著者Kohno, T, Morita, H.
登録日2005-10-27
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Insight into Chain-Length Control and Product Specificity of Pentaketide Chromone Synthase from Aloe arborescens
Chem.Biol., 14, 2007
3WD8
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TypeIII polyketide synthases
分子名称: GLYCEROL, Type III polyketide synthase quinolone synthase
著者Mori, T, Shimokawa, Y, Matsui, T, Morita, H, Abe, I.
登録日2013-06-10
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.463 Å)
主引用文献Cloning, characterization, and crystal structure analysis of novel type III polyketide synthases from Citrus microcarpa
To be Published
5DAA
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BU of 5daa by Molmil
E177K MUTANT OF D-AMINO ACID AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAMINE-5'-PHOSPHATE
分子名称: D-AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Peisach, D, Ringe, D.
登録日1998-12-13
公開日1998-12-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Effects of the E177K mutation in D-amino acid transaminase. Studies on an essential coenzyme anchoring group that contributes to stereochemical fidelity.
Biochemistry, 38, 1999
1G2W
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BU of 1g2w by Molmil
E177S MUTANT OF THE PYRIDOXAL-5'-PHOSPHATE ENZYME D-AMINO ACID AMINOTRANSFERASE
分子名称: ACETATE ION, D-ALANINE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Lepore, B.W, Ringe, D.
登録日2000-10-21
公開日2000-11-15
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Studies on an Active Site Residue, E177, That Affects Binding of the Coenzyme in D-Amino Acid Transaminase, and Mechanistic Studies on a Suicide Substrate
Biochemistry and Molecular Biology of Vitamin B6 and PQQ-dependent Proteins, 10th Annual International Symposium on Vitamin B6, 2000
1RLS
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BU of 1rls by Molmil
CRYSTAL STRUCTURE OF RNASE T1 COMPLEXED WITH THE PRODUCT NUCLEOTIDE 3'-GMP. STRUCTURAL EVIDENCE FOR DIRECT INTERACTION OF HISTIDINE 40 AND GLUTAMIC ACID 58 WITH THE 2'-HYDROXYL GROUP OF RIBOSE
分子名称: CALCIUM ION, GUANOSINE-3'-MONOPHOSPHATE, RIBONUCLEASE T1
著者Gohda, K, Oka, K.-I, Tomita, K.-I, Hakoshima, T.
登録日1994-03-29
公開日1994-12-20
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of RNase T1 complexed with the product nucleotide 3'-GMP. Structural evidence for direct interaction of histidine 40 and glutamic acid 58 with the 2'-hydroxyl group of the ribose.
J.Biol.Chem., 269, 1994
2DAA
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BU of 2daa by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF D-AMINO ACID AMINOTRANSFERASE INACTIVATED BY D-CYCLOSERINE
分子名称: D-AMINO ACID AMINOTRANSFERASE, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE
著者Peisach, D, Chipman, D.M, Ringe, D.
登録日1997-10-27
公開日1998-03-18
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献D-Cycloserine Inactivation of D-Amino Acid Aminotransferase Leads to a Stable Noncovalent Protein Complex with an Aromatic Cycloserine-Plp Derivative
J.Am.Chem.Soc., 120, 1998
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