2DY3

Crystal Structure of alanine racemase from Corynebacterium glutamicum

Summary for 2DY3

DescriptorAlanine racemase, PYRIDOXAL-5'-PHOSPHATE (3 entities in total)
Functional Keywordsalpha/beta barrel, isomerase
Biological sourceCorynebacterium glutamicum
Total number of polymer chains4
Total molecular weight157874.9
Authors
Miyaguchi, I.,Sasaki, C.,Kato, R.,Oikawa, T.,Sugio, S. (deposition date: 2006-09-05, release date: 2007-09-11, Last modification date: 2011-07-13)
Primary citation
Miyaguchi, I.,Sasaki, C.,Kato, R.,Oikawa, T.,Sugio, S.
Crystal Structure of Alanine Racemase from Corynebacterium glutamicum at 2.1 A resolution
To be Published,
Experimental method
X-RAY DIFFRACTION (2.1 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.255210.4%4.8%5.0%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2dy3
no rotation
Molmil generated image of 2dy3
rotated about x axis by 90°
Molmil generated image of 2dy3
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 2dy3
no rotation
Molmil generated image of 2dy3
rotated about x axis by 90°
Molmil generated image of 2dy3
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (2dy3.pdb2.gz [116.09 KB])
Coordinate files for Biological unit (2dy3.pdb1.gz [114.9 KB])