2DR5
| Complex structure of CCA adding enzyme with mini-helix lacking CCA | 分子名称: | CCA-adding enzyme, SULFATE ION, tRNA (32-MER) | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | 登録日 | 2006-06-08 | 公開日 | 2006-10-31 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
|
|
2DR7
| Complex structure of CCA-adding enzyme with tRNAminiDC | 分子名称: | CCA-adding enzyme, SULFATE ION, tRNA (33-MER) | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | 登録日 | 2006-06-08 | 公開日 | 2006-11-14 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
|
|
2DRB
| Complex structure of CCA-adding enzyme with tRNAminiCCA | 分子名称: | CCA-adding enzyme, SULFATE ION, tRNA (35-MER) | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | 登録日 | 2006-06-08 | 公開日 | 2006-11-14 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
|
|
2DVI
| Complex structure of CCA-adding enzyme, mini-DCC and CTP | 分子名称: | CCA-adding enzyme, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | 登録日 | 2006-07-31 | 公開日 | 2006-11-14 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.61 Å) | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
|
|
2E7S
| |
2EF1
| Crystal structure of the extracellular domain of human CD38 | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADP-ribosyl cyclase 1 | 著者 | Kukimoto-Niino, M, Nureki, O, Murayama, K, Shirouzu, M, Katada, T, Hara-Yokoyama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-02-20 | 公開日 | 2007-02-27 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal structure of the extracellular domain of human CD38 To be Published
|
|
2EQB
| Crystal structure of the Rab GTPase Sec4p, the Sec2p GEF domain, and phosphate complex | 分子名称: | PHOSPHATE ION, Rab guanine nucleotide exchange factor SEC2, Ras-related protein SEC4 | 著者 | Sato, Y, Fukai, S, Ishitani, R, Nureki, O. | 登録日 | 2007-03-30 | 公開日 | 2007-05-22 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Crystal structure of the Sec4p{middle dot}Sec2p complex in the nucleotide exchanging intermediate state Proc.Natl.Acad.Sci.Usa, 104, 2007
|
|
8GUJ
| Bre1-nucleosome complex (Model II) | 分子名称: | DNA (147-mer), E3 ubiquitin-protein ligase BRE1A, E3 ubiquitin-protein ligase BRE1B, ... | 著者 | Onishi, S, Sato, K, Hamada, K, Nishizawa, T, Nureki, O, Ogata, K, Sengoku, T. | 登録日 | 2022-09-12 | 公開日 | 2023-09-20 | 最終更新日 | 2024-04-03 | 実験手法 | ELECTRON MICROSCOPY (2.8 Å) | 主引用文献 | Structure of the human Bre1 complex bound to the nucleosome. Nat Commun, 15, 2024
|
|
8GUI
| Bre1-nucleosome complex (Model I) | 分子名称: | DNA (147-mer), E3 ubiquitin-protein ligase BRE1A, E3 ubiquitin-protein ligase BRE1B, ... | 著者 | Onishi, S, Hamada, K, Sato, K, Nishizawa, T, Nureki, O, Ogata, K, Sengoku, T. | 登録日 | 2022-09-12 | 公開日 | 2023-09-20 | 最終更新日 | 2024-04-03 | 実験手法 | ELECTRON MICROSCOPY (2.81 Å) | 主引用文献 | Structure of the human Bre1 complex bound to the nucleosome. Nat Commun, 15, 2024
|
|
8GUK
| Human nucleosome core particle (free form) | 分子名称: | DNA (147-mer), Histone H2A type 1, Histone H2B type 1-J, ... | 著者 | Onishi, S, Sato, K, Nishizawa, T, Nureki, O, Ogata, K, Sengoku, T. | 登録日 | 2022-09-12 | 公開日 | 2023-09-20 | 最終更新日 | 2024-04-03 | 実験手法 | ELECTRON MICROSCOPY (2.51 Å) | 主引用文献 | Structure of the human Bre1 complex bound to the nucleosome. Nat Commun, 15, 2024
|
|
8HB0
| Structure of human SGLT2-MAP17 complex with TA1887 | 分子名称: | (2R,3R,4S,5S,6R)-2-[3-[(4-cyclopropylphenyl)methyl]-4-fluoranyl-indol-1-yl]-6-(hydroxymethyl)oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, PDZK1-interacting protein 1, ... | 著者 | Hiraizumi, M, Kishida, H, Miyaguchi, I, Nureki, O. | 登録日 | 2022-10-27 | 公開日 | 2023-11-01 | 最終更新日 | 2024-02-07 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | Transport and inhibition mechanism of the human SGLT2-MAP17 glucose transporter. Nat.Struct.Mol.Biol., 31, 2024
|
|
8HDH
| Structure of human SGLT2-MAP17 complex with Canagliflozin | 分子名称: | (2~{S},3~{R},4~{R},5~{S},6~{R})-2-[3-[[5-(4-fluorophenyl)thiophen-2-yl]methyl]-4-methyl-phenyl]-6-(hydroxymethyl)oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, PDZK1-interacting protein 1, ... | 著者 | Hiraizumi, M, Kishida, H, Miyaguchi, I, Nureki, O. | 登録日 | 2022-11-04 | 公開日 | 2023-11-08 | 最終更新日 | 2024-02-07 | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | 主引用文献 | Transport and inhibition mechanism of the human SGLT2-MAP17 glucose transporter. Nat.Struct.Mol.Biol., 31, 2024
|
|
8HIN
| Structure of human SGLT2-MAP17 complex with Phlorizin | 分子名称: | 1-[2-[(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,6-bis(oxidanyl)phenyl]-3-(4-hydroxyphenyl)propan-1-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, PDZK1-interacting protein 1, ... | 著者 | Hiraizumi, M, Kishida, H, Miyaguchi, I, Nureki, O. | 登録日 | 2022-11-21 | 公開日 | 2023-11-22 | 最終更新日 | 2024-02-07 | 実験手法 | ELECTRON MICROSCOPY (3.3 Å) | 主引用文献 | Transport and inhibition mechanism of the human SGLT2-MAP17 glucose transporter. Nat.Struct.Mol.Biol., 31, 2024
|
|
8HG7
| Structure of human SGLT2-MAP17 complex with Sotagliflozin | 分子名称: | (2S,3R,4R,5S,6R)-2-[4-chloranyl-3-[(4-ethoxyphenyl)methyl]phenyl]-6-methylsulfanyl-oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, PDZK1-interacting protein 1, ... | 著者 | Hiraizumi, M, Kishida, H, Miyaguchi, I, Nureki, O. | 登録日 | 2022-11-14 | 公開日 | 2023-11-15 | 最終更新日 | 2024-02-07 | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | 主引用文献 | Transport and inhibition mechanism of the human SGLT2-MAP17 glucose transporter. Nat.Struct.Mol.Biol., 31, 2024
|
|
8HEZ
| Structure of human SGLT2-MAP17 complex with Dapagliflozin | 分子名称: | (2S,3R,4R,5S,6R)-2-[4-chloranyl-3-[(4-ethoxyphenyl)methyl]phenyl]-6-(hydroxymethyl)oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, PDZK1-interacting protein 1, ... | 著者 | Hiraizumi, M, Kishida, H, Miyaguchi, I, Nureki, O. | 登録日 | 2022-11-09 | 公開日 | 2023-11-15 | 最終更新日 | 2024-02-07 | 実験手法 | ELECTRON MICROSCOPY (2.8 Å) | 主引用文献 | Transport and inhibition mechanism of the human SGLT2-MAP17 glucose transporter. Nat.Struct.Mol.Biol., 31, 2024
|
|
5EGH
| Structure of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase in complex with phosphocholine | 分子名称: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Morita, J, Kano, K, Kato, K, Takita, H, Ishitani, R, Nishimasu, H, Nureki, O, Aoki, J. | 登録日 | 2015-10-27 | 公開日 | 2016-03-09 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (1.803 Å) | 主引用文献 | Structure and biological function of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase Sci Rep, 6, 2016
|
|
5EGE
| Structure of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase | 分子名称: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Morita, J, Kano, K, Kato, K, Takita, H, Ishitani, R, Nishimasu, H, Nureki, O, Aoki, J. | 登録日 | 2015-10-27 | 公開日 | 2016-03-09 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure and biological function of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase Sci Rep, 6, 2016
|
|
5F1C
| Crystal structure of an invertebrate P2X receptor from the Gulf Coast tick in the presence of ATP and Zn2+ ion at 2.9 Angstroms | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, Putative uncharacterized protein, ... | 著者 | Kasuya, G, Hattori, M, Ishitani, R, Nureki, O. | 登録日 | 2015-11-30 | 公開日 | 2016-03-16 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Structural Insights into Divalent Cation Modulations of ATP-Gated P2X Receptor Channels Cell Rep, 14, 2016
|
|
5F7A
| Nitrite complex structure of copper nitrite reductase from Alcaligenes faecalis determined at 293 K | 分子名称: | COPPER (II) ION, Copper-containing nitrite reductase, NITRITE ION | 著者 | Fukuda, Y, Tse, K.M, Nakane, T, Nakatsu, T, Suzuki, M, Sugahara, M, Inoue, S, Masuda, T, Yumoto, F, Matsugaki, N, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Murphy, M.E.P, Inoue, T, Iwata, S, Mizohata, E. | 登録日 | 2015-12-07 | 公開日 | 2016-03-16 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.54 Å) | 主引用文献 | Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography Proc.Natl.Acad.Sci.USA, 113, 2016
|
|
5F7B
| Resting state structure of CuNiR form Alcaligenes faecalis determined at 293 K | 分子名称: | COPPER (II) ION, Copper-containing nitrite reductase | 著者 | Fukuda, Y, Tse, K.M, Nakane, T, Nakatsu, T, Suzuki, M, Sugahara, M, Inoue, S, Masuda, T, Yumoto, F, Matsugaki, N, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Murphy, M.E.P, Inoue, T, Iwata, S, Mizohata, E. | 登録日 | 2015-12-07 | 公開日 | 2016-03-16 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.56 Å) | 主引用文献 | Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography Proc.Natl.Acad.Sci.USA, 113, 2016
|
|
7E7Z
| |
7E87
| |
7E89
| |
7E84
| CryoEM structure of human Kv4.2-KChIP1 complex | 分子名称: | Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2 | 著者 | Kise, Y, Nureki, O. | 登録日 | 2021-02-28 | 公開日 | 2021-10-13 | 最終更新日 | 2022-02-16 | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | 主引用文献 | Structural basis of gating modulation of Kv4 channel complexes. Nature, 599, 2021
|
|
7E8H
| CryoEM structure of human Kv4.2-DPP6S-KChIP1 complex | 分子名称: | Dipeptidyl aminopeptidase-like protein 6, Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2 | 著者 | Kise, Y, Nureki, O. | 登録日 | 2021-03-01 | 公開日 | 2021-10-13 | 最終更新日 | 2022-02-16 | 実験手法 | ELECTRON MICROSCOPY (4.5 Å) | 主引用文献 | Structural basis of gating modulation of Kv4 channel complexes. Nature, 599, 2021
|
|