Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3CRO
DownloadVisualize
BU of 3cro by Molmil
THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
分子名称: DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*AP*AP*CP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*GP*TP*TP*TP*GP*T P*AP*CP*T)-3'), PROTEIN (434 CRO)
著者Mondragon, A, Harrison, S.C.
登録日1990-07-06
公開日1991-10-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The phage 434 Cro/OR1 complex at 2.5 A resolution.
J.Mol.Biol., 219, 1991
2CRO
DownloadVisualize
BU of 2cro by Molmil
STRUCTURE OF PHAGE 434 CRO PROTEIN AT 2.35 ANGSTROMS RESOLUTION
分子名称: REGULATORY PROTEIN CRO
著者Mondragon, A, Wolberger, C, Harrison, S.C.
登録日1988-12-08
公開日1989-10-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of phage 434 Cro protein at 2.35 A resolution.
J.Mol.Biol., 205, 1989
1R69
DownloadVisualize
BU of 1r69 by Molmil
STRUCTURE OF THE AMINO-TERMINAL DOMAIN OF PHAGE 434 REPRESSOR AT 2.0 ANGSTROMS RESOLUTION
分子名称: REPRESSOR PROTEIN CI
著者Mondragon, A, Subbiah, S, Alamo, S.C, Drottar, M, Harrison, S.C.
登録日1988-12-08
公開日1989-10-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the amino-terminal domain of phage 434 repressor at 2.0 A resolution.
J.Mol.Biol., 205, 1989
1D6M
DownloadVisualize
BU of 1d6m by Molmil
CRYSTAL STRUCTURE OF E. COLI DNA TOPOISOMERASE III
分子名称: DNA TOPOISOMERASE III
著者Mondragon, A, DiGate, R.
登録日1999-10-14
公開日2000-10-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of Escherichia coli DNA topoisomerase III.
Structure Fold.Des., 7, 1999
7LJP
DownloadVisualize
BU of 7ljp by Molmil
Structure of Thermotoga maritima SmpB
分子名称: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, SULFATE ION, ...
著者Chan, C.W, Mondragon, A.
登録日2021-01-29
公開日2022-02-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of Thermotoga maritima SmpB reveals its C-terminal tail domain in a helical conformation mimicking that of a ribosome-bound state
To Be Published
5HM5
DownloadVisualize
BU of 5hm5 by Molmil
Crystal structure of Topo-97, an N-terminal 97kDa fragment of topoisomerase V
分子名称: Topoisomerase V
著者Rajan, R, Osterman, A, Mondragon, A.
登録日2016-01-15
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Methanopyrus kandleri topoisomerase V contains three distinct AP lyase active sites in addition to the topoisomerase active site.
Nucleic Acids Res., 44, 2016
6NBT
DownloadVisualize
BU of 6nbt by Molmil
CRISPR Complex Subunit Csm3 from Staphylococcus epidermidis RP62a
分子名称: CALCIUM ION, CRISPR-associated protein, SAMARIUM (III) ION
著者Dorsey, B.W, Mondragon, A.
登録日2018-12-10
公開日2019-02-13
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural organization of a Type III-A CRISPR effector subcomplex determined by X-ray crystallography and cryo-EM.
Nucleic Acids Res., 47, 2019
6CWX
DownloadVisualize
BU of 6cwx by Molmil
Crystal structure of human ribonuclease P/MRP proteins Rpp20/Rpp25
分子名称: FORMIC ACID, Ribonuclease P protein subunit p20, Ribonuclease P protein subunit p25, ...
著者Chan, C.W, Kiesel, B.R, Mondragon, A.
登録日2018-03-31
公開日2018-04-18
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of Human Rpp20/Rpp25 Reveals Quaternary Level Adaptation of the Alba Scaffold as Structural Basis for Single-stranded RNA Binding.
J. Mol. Biol., 430, 2018
4ZQA
DownloadVisualize
BU of 4zqa by Molmil
Crystal Structure of the Sds3 Dimerization Domain
分子名称: Sin3 histone deacetylase corepressor complex component SDS3
著者Chan, C.W, Mondragon, A, Clark, M, Radhakrishnan, I.
登録日2015-05-08
公開日2015-07-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural insights into the assembly of the histone deacetylase-associated Sin3L/Rpd3L corepressor complex.
Proc.Natl.Acad.Sci.USA, 112, 2015
8DF8
DownloadVisualize
BU of 8df8 by Molmil
Structure of M. kandleri topoisomerase V in complex with DNA. 40 base pair symmetric DNA complex
分子名称: DNA (42-MER), PHOSPHATE ION, PHOSPHITE ION, ...
著者Osterman, A, Mondragon, A.
登録日2022-06-21
公開日2022-08-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Structures of topoisomerase V in complex with DNA reveal unusual DNA binding mode and novel relaxation mechanism.
Elife, 11, 2022
8DF9
DownloadVisualize
BU of 8df9 by Molmil
Structure of M. kandleri topoisomerase V in complex with DNA. 38 base pair asymmetric DNA complex
分子名称: DNA (33-MER), DNA (5'-D(P*GP*CP*CP*TP*GP*CP*AP*CP*GP*AP*AP*GP*TP*AP*AP*GP*C)-3'), DNA (5'-D(P*GP*CP*CP*TP*GP*CP*AP*CP*GP*AP*AP*GP*TP*AP*AP*GP*CP*A)-3'), ...
著者Osterman, A, Mondragon, A.
登録日2022-06-21
公開日2022-08-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Structures of topoisomerase V in complex with DNA reveal unusual DNA binding mode and novel relaxation mechanism.
Elife, 11, 2022
8DFB
DownloadVisualize
BU of 8dfb by Molmil
Structure of M. kandleri topoisomerase V in complex with DNA. 39 base pair symmetric DNA complex
分子名称: DNA (40-MER), POTASSIUM ION, Topoisomerase V
著者Osterman, A, Mondragon, A.
登録日2022-06-21
公開日2022-08-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献Structures of topoisomerase V in complex with DNA reveal unusual DNA binding mode and novel relaxation mechanism.
Elife, 11, 2022
8DF7
DownloadVisualize
BU of 8df7 by Molmil
Structure of M. kandleri topoisomerase V in complex with DNA. 38 base pair symmetric DNA complex
分子名称: DNA (39-MER), POTASSIUM ION, Topoisomerase V
著者Osterman, A, Mondragon, A.
登録日2022-06-21
公開日2022-08-31
実験手法X-RAY DIFFRACTION (3.52 Å)
主引用文献Structures of topoisomerase V in complex with DNA reveal unusual DNA binding mode and novel relaxation mechanism.
Elife, 11, 2022
1YN9
DownloadVisualize
BU of 1yn9 by Molmil
Crystal structure of baculovirus RNA 5'-phosphatase complexed with phosphate
分子名称: PHOSPHATE ION, polynucleotide 5'-phosphatase
著者Changela, A, Martins, A, Shuman, S, Mondragon, A.
登録日2005-01-24
公開日2005-02-22
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of baculovirus RNA triphosphatase complexed with phosphate
J.Biol.Chem., 280, 2005
2A2E
DownloadVisualize
BU of 2a2e by Molmil
Crystal structure of the RNA subunit of Ribonuclease P. Bacterial A-type.
分子名称: OSMIUM ION, RNA subunit of RNase P
著者Torres-Larios, A, Swinger, K.K, Krasilnikov, A.S, Pan, T, Mondragon, A.
登録日2005-06-22
公開日2005-09-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.85 Å)
主引用文献Crystal structure of the RNA component of bacterial ribonuclease P.
Nature, 437, 2005
4WLW
DownloadVisualize
BU of 4wlw by Molmil
CRYSTAL STRUCTURE OF THE AG(I) (ACTIVATOR) FORM OF E. COLI CUER, A COPPER EFFLUX REGULATOR, BOUND TO COPA PROMOTER DNA
分子名称: DNA NON-TEMPLATE STRAND (5-D(*DGP*DAP*DCP*DCP *DTP*DTP*DCP*DCP*DCP*DCP*DTP*DTP*DGP*DCP*DTP*DGP*DGP*DAP *DAP*DGP*DGP*DTP*DC)-3, DNA TEMPLATE STRAND (5-D(*DGP*DAP*DCP*DCP*DTP *DTP*DCP*DCP*DAP*DGP*DCP*DAP*DAP*DGP*DGP*DGP*DGP*DAP*DAP *DGP*DGP*DTP*DC)-3, HTH-type transcriptional regulator CueR, ...
著者Philips, S.J, Canalizo-Hernandez, M, Mondragon, A, O'Halloran, T.V.
登録日2014-10-08
公開日2015-09-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献TRANSCRIPTION. Allosteric transcriptional regulation via changes in the overall topology of the core promoter.
Science, 349, 2015
4WLS
DownloadVisualize
BU of 4wls by Molmil
Crystal structure of the metal-free (repressor) form of E. Coli CUER, a copper efflux regulator, bound to COPA promoter DNA
分子名称: COPA PROMOTER DNA NON-TEMPLATE STRAND, COPA PROMOTER DNA NON-TEMPLATE STRAND (ALTERNATE CONFORMATION), COPA PROMOTER DNA TEMPLATE STRAND, ...
著者Philips, S.J, Canalizo-Hernandez, M, Mondragon, A, O'Halloran, T.V.
登録日2014-10-08
公開日2015-09-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.105 Å)
主引用文献Allosteric transcriptional regulation via changes in the overall topology of the core promoter.
Science, 349, 2015
4MTE
DownloadVisualize
BU of 4mte by Molmil
Zinc Uptake Regulator Complexed with Zinc and DNA
分子名称: ZINC ION, Zinc uptake regulation protein, znuABC operator DNA
著者Gilston, B.A, Mondragon, A, O'Halloran, T.V.
登録日2013-09-19
公開日2014-11-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Mechanistic Basis of Zinc Regulation Across the E. coli Zur Regulon.
Plos Biol., 12, 2014
1I9S
DownloadVisualize
BU of 1i9s by Molmil
CRYSTAL STRUCTURE OF THE RNA TRIPHOSPHATASE DOMAIN OF MOUSE MRNA CAPPING ENZYME
分子名称: CACODYLATE ION, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
著者Changela, A, Ho, C.K, Martins, A, Shuman, S, Mondragon, A.
登録日2001-03-20
公開日2001-05-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure and mechanism of the RNA triphosphatase component of mammalian mRNA capping enzyme.
EMBO J., 20, 2001
1I9T
DownloadVisualize
BU of 1i9t by Molmil
CRYSTAL STRUCTURE OF THE OXIDIZED RNA TRIPHOSPHATASE DOMAIN OF MOUSE MRNA CAPPING ENZYME
分子名称: CACODYLATE ION, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
著者Changela, A, Ho, C.K, Martins, A, Shuman, S, Mondragon, A.
登録日2001-03-20
公開日2001-05-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and mechanism of the RNA triphosphatase component of mammalian mRNA capping enzyme.
EMBO J., 20, 2001
4GFJ
DownloadVisualize
BU of 4gfj by Molmil
Crystal structure of Topo-78, an N-terminal 78kDa fragment of topoisomerase V
分子名称: GLYCEROL, Topoisomerase V, ZINC ION
著者Rajan, R, Prasad, R, Taneja, B, Wilson, S.H, Mondragon, A.
登録日2012-08-03
公開日2012-12-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Identification of one of the apurinic/apyrimidinic lyase active sites of topoisomerase V by structural and functional studies.
Nucleic Acids Res., 41, 2013
1I7D
DownloadVisualize
BU of 1i7d by Molmil
NONCOVALENT COMPLEX OF E.COLI DNA TOPOISOMERASE III WITH AN 8-BASE SINGLE-STRANDED DNA OLIGONUCLEOTIDE
分子名称: 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3', CHLORIDE ION, DNA TOPOISOMERASE III, ...
著者Changela, A, DiGate, R.J, Mondragon, A.
登録日2001-03-08
公開日2001-06-29
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of a complex of a type IA DNA topoisomerase with a single-stranded DNA molecule.
Nature, 411, 2001
3UD2
DownloadVisualize
BU of 3ud2 by Molmil
Crystal structure of Selenomethionine ZU5A-ZU5B protein domains of human erythrocyte ankyrin
分子名称: Ankyrin-1, CHLORIDE ION, ETHANOL, ...
著者Yasunaga, M, Ipsaro, J.J, Mondragon, A.
登録日2011-10-27
公開日2012-02-22
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structurally Similar but Functionally Diverse ZU5 Domains in Human Erythrocyte Ankyrin.
J.Mol.Biol., 417, 2012
3UD1
DownloadVisualize
BU of 3ud1 by Molmil
Crystal structure of ZU5A-ZU5B domains of human erythrocyte ankyrin
分子名称: Ankyrin-1, ETHANOL
著者Yasunaga, M, Ipsaro, J.J, Mondragon, A.
登録日2011-10-27
公開日2012-02-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structurally Similar but Functionally Diverse ZU5 Domains in Human Erythrocyte Ankyrin.
J.Mol.Biol., 417, 2012
4MTD
DownloadVisualize
BU of 4mtd by Molmil
Zinc Uptake Regulator Complexed With Zinc AND DNA
分子名称: ZINC ION, Zinc uptake regulation protein, znuABC operator DNA
著者Gilston, B.A, Mondragon, A, O'Halloran, T.V.
登録日2013-09-19
公開日2014-11-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Mechanistic Basis of Zinc Regulation Across the E. coli Zur Regulon.
Plos Biol., 12, 2014

 

1234>

219140

件を2024-05-01に公開中

PDB statisticsPDBj update infoContact PDBjnumon