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4LE9
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BU of 4le9 by Molmil
Crystal structure of a chimeric c-Src-SH3 domain
分子名称: Proto-oncogene tyrosine-protein kinase Src, TRIETHYLENE GLYCOL
著者Camara-Artigas, A, Martinez-Rodriguez, S, Ortiz-Salmeron, E, Martin-Garcia, J.M.
登録日2013-06-25
公開日2014-05-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.344 Å)
主引用文献3D domain swapping in a chimeric c-Src SH3 domain takes place through two hinge loops.
J.Struct.Biol., 186, 2014
7APN
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BU of 7apn by Molmil
Structure of Lipase TL from bulk agarose grown crystal
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Lipase, ...
著者Gavira, J.A, Martinez-Rodriguez, S, Fernande-Penas, R, Verdugo-Escamilla, C.
登録日2020-10-19
公開日2021-03-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Production of Cross-Linked Lipase Crystals at a Preparative Scale.
Cryst.Growth Des., 21, 2021
7APP
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BU of 7app by Molmil
Structure of Lipase TL from capillary grown crystal in the presence of agarose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FORMIC ACID, Lipase, ...
著者Gavira, J.A, Martinez-Rodriguez, S, Fernande-Penas, R, Verdugo-Escamilla, C.
登録日2020-10-19
公開日2021-03-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Production of Cross-Linked Lipase Crystals at a Preparative Scale.
Cryst.Growth Des., 21, 2021
5FQK
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BU of 5fqk by Molmil
W229D and F290W mutant of the last common ancestor of Gram-negative bacteria (GNCA4) beta-lactamase class A bound to 5(6)-nitrobenzotriazole (TS-analog)
分子名称: 6-NITROBENZOTRIAZOLE, GNCA4 LACTAMASE W229D AND F290W
著者Gavira, J.A, Risso, V.A, Martinez-Rodriguez, S, Sanchez-Ruiz, J.M.
登録日2015-12-11
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.767 Å)
主引用文献De novo active sites for resurrected Precambrian enzymes.
Nat Commun, 8, 2017
5FQI
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BU of 5fqi by Molmil
W229D and F290W mutant of the last common ancestor of Gram-negative bacteria (GNCA4) beta-lactamase class A
分子名称: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, DI(HYDROXYETHYL)ETHER, ...
著者Gavira, J.A, Risso, V.A, Martinez-Rodriguez, S, Sanchez-Ruiz, J.M.
登録日2015-12-11
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献De novo active sites for resurrected Precambrian enzymes.
Nat Commun, 8, 2017
5FQJ
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BU of 5fqj by Molmil
W229D mutant of the last common ancestor of Gram-negative bacteria (GNCA) beta-lactamase bound to 5(6)-nitrobenzotriazole (TS-analog)
分子名称: 6-NITROBENZOTRIAZOLE, GNCA LACTAMASE W229D
著者Gavira, J.A, Martinez-Rodriguez, S, Risso, V.A, Sanchez-Ruiz, J.M.
登録日2015-12-11
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.271 Å)
主引用文献De novo active sites for resurrected Precambrian enzymes.
Nat Commun, 8, 2017
5FQQ
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BU of 5fqq by Molmil
Last common ancestor of Gram-negative bacteria (GNCA4) beta-lactamase class A
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, DI(HYDROXYETHYL)ETHER, GNCA4 LACTAMASE
著者Gavira, J.A, Martinez-Rodriguez, S, Risso, V.A, Sanchez-Ruiz, J.M.
登録日2015-12-14
公開日2016-12-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献De novo active sites for resurrected Precambrian enzymes.
Nat Commun, 8, 2017
2Z70
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BU of 2z70 by Molmil
E.coli RNase 1 in complex with d(CGCGATCGCG)
分子名称: CALCIUM ION, DNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DTP*DCP*DGP*DCP*DG)-3'), Ribonuclease I
著者Martinez-Rodriguez, S, Loris, R, Messens, J.
登録日2007-08-09
公開日2008-06-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Nonspecific base recognition mediated by water bridges and hydrophobic stacking in ribonuclease I from Escherichia coli
Protein Sci., 17, 2008
4REX
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BU of 4rex by Molmil
Crystal structure of the first WW domain of human YAP2 isoform
分子名称: SULFATE ION, Yorkie homolog
著者Camara-Artigas, A.
登録日2014-09-24
公開日2015-08-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the first WW domain of human YAP2 isoform.
J.Struct.Biol., 191, 2015
5DK8
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BU of 5dk8 by Molmil
Human ubiquitin in the P1 space group
分子名称: MAGNESIUM ION, Polyubiquitin-B
著者Camara-Artigas, A, Bacarizo, J.
登録日2015-09-03
公開日2015-12-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献New crystal form of human ubiquitin in the presence of magnesium.
Acta Crystallogr.,Sect.F, 72, 2016
3DWT
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BU of 3dwt by Molmil
Structure of CabBCII-10 nanobody
分子名称: GLYCEROL, cAbBCII-10
著者Vincke, C, Loris, R, Muyldermans, S, Conrath, K.
登録日2008-07-23
公開日2008-12-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献General strategy to humanize a camelid single-domain antibody and identification of a universal humanized nanobody scaffold.
J.Biol.Chem., 2008
6GCV
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BU of 6gcv by Molmil
Ligand binding domain (LBD) of the p. aeruginosa nitrate receptor McpN
分子名称: ACETATE ION, Chemotaxis transducer, NITRATE ION, ...
著者Gavira, J.A, Krell, T, Martin-Mora, D, Ortega, A.
登録日2018-04-19
公開日2018-09-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The Molecular Mechanism of Nitrate Chemotaxis via Direct Ligand Binding to the PilJ Domain of McpN.
MBio, 10, 2019
6HW1
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BU of 6hw1 by Molmil
ROOM TEMPERATURE STRUCTURE OF LIPASE FROM T. LANUGINOSA AT 2.5 A RESOLUTION IN CHIPX MICROFLUIDIC DEVICE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase, MAGNESIUM ION, ...
著者Gavira, J.A, Fernadez-Penas, R, Martinez-Rodriguez, S, Verdugo-Escamilla, C.
登録日2018-10-11
公開日2018-10-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A simple and versatile microfluidic device for efficient biomacromolecule crystallization and structural analysis by serial crystallography.
Iucrj, 6, 2019
5FQM
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BU of 5fqm by Molmil
Last common ancestor of Gram Negative Bacteria (GNCA) Class A beta- lactamase
分子名称: GLYCEROL, GNCA BETA LACTAMASE, SULFATE ION
著者Martinez Rodriguez, S, Gavira, J.A, Risso, V.A, Sanchez Ruiz, J.M.
登録日2015-12-12
公開日2017-01-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献De novo active sites for resurrected Precambrian enzymes.
Nat Commun, 8, 2017
4JZ4
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BU of 4jz4 by Molmil
Crystal structure of chicken c-Src-SH3 domain: monomeric form
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, NICKEL (II) ION, Proto-oncogene tyrosine-protein kinase Src
著者Camara-Artigas, A.
登録日2013-04-02
公開日2014-04-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014
4JZ3
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BU of 4jz3 by Molmil
Crystal structure of the chicken c-Src-SH3 domain intertwined dimer
分子名称: DI(HYDROXYETHYL)ETHER, Proto-oncogene tyrosine-protein kinase Src, TRIETHYLENE GLYCOL
著者Camara-Artigas, A.
登録日2013-04-02
公開日2014-04-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.852 Å)
主引用文献Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014
3S8J
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BU of 3s8j by Molmil
Crystal structure of a papaya latex serine protease inhibitor (PPI) at 2.6A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, FORMIC ACID, ...
著者Garcia-Pino, A.
登録日2011-05-29
公開日2011-11-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The plasticity of the beta-Trefoil fold constitutes an evolutionary platform for protease inhibition
J.Biol.Chem., 286, 2011
3S8K
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BU of 3s8k by Molmil
Crystal structure of a papaya latex serine protease inhibitor (PPI) at 1.7A resolution
分子名称: AMMONIUM ION, COBALT (II) ION, GLYCEROL, ...
著者Garcia-Pino, A.
登録日2011-05-29
公開日2011-11-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The plasticity of the beta-Trefoil fold constitutes an evolutionary platform for protease inhibition
J.Biol.Chem., 286, 2011
3V58
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BU of 3v58 by Molmil
Crystal Structure of the B-phycoerythrin from the red algae Porphyridium Cruentum at pH5
分子名称: PHYCOERYTHROBILIN, Phycoerythrin alpha subunit, Phycoerythrin beta subunit, ...
著者Camara-Artigas, A.
登録日2011-12-16
公開日2012-10-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献pH-dependent structural conformations of B-phycoerythrin from Porphyridium cruentum
Febs J., 279, 2012
3V57
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BU of 3v57 by Molmil
Crystal Structure of the B-phycoerythrin from the red algae Porphyridium Cruentum at pH8
分子名称: PHYCOERYTHROBILIN, Phycoerythrin alpha subunit, Phycoerythrin beta subunit, ...
著者Camara-Artigas, A.
登録日2011-12-16
公開日2012-10-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献pH-dependent structural conformations of B-phycoerythrin from Porphyridium cruentum
Febs J., 279, 2012
4OMO
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BU of 4omo by Molmil
Crystal structure of the c-Src tyrosine kinase SH3 domain mutant Q128E
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, NICKEL (II) ION, Proto-oncogene tyrosine-protein kinase Src
著者Camara-Artigas, A, Bacarizo, J.
登録日2014-01-27
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014
4OML
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BU of 4oml by Molmil
Crystal structure of the intertwined dimer of the c-Src tyrosine kinase SH3 domain mutant Q128R
分子名称: DI(HYDROXYETHYL)ETHER, Proto-oncogene tyrosine-protein kinase Src, TRIETHYLENE GLYCOL
著者Camara-Artigas, A, Bacarizo, J.
登録日2014-01-27
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014
4OMN
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BU of 4omn by Molmil
Crystal structure of the intertwined dimer of the c-Src tyrosine kinase SH3 domain mutant Q128E
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Proto-oncogene tyrosine-protein kinase Src, ...
著者Camara-Artigas, A, Bacarizo, J.
登録日2014-01-27
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014
4OMP
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BU of 4omp by Molmil
Crystal structure of the intertwined dimer of the c-Src tyrosine kinase SH3 domain mutant Q128K
分子名称: DI(HYDROXYETHYL)ETHER, Proto-oncogene tyrosine-protein kinase Src, TRIETHYLENE GLYCOL
著者Camara-Artigas, A, Bacarizo, J.
登録日2014-01-27
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014
4QT7
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BU of 4qt7 by Molmil
Crystal structure of the c-Src SH3 domain in complex with a peptide from the Hepatitis C virus NS5A-protein
分子名称: NS5A, Proto-oncogene tyrosine-protein kinase Src
著者Camara-Artigas, A, Bacarizo, J.
登録日2014-07-07
公開日2014-12-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure of the c-Src-SH3 domain in complex with a proline-rich motif of NS5A protein from the hepatitis C virus.
J.Struct.Biol., 189, 2015
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