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2YJT
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BU of 2yjt by Molmil
Crystal structure of E. coli DEAD-box protein SrmB bound to regulator of ribonuclease activity A (RraA)
Descriptor: ATP-DEPENDENT RNA HELICASE SRMB, REGULATOR OF RIBONUCLEASE ACTIVITY A
Authors:Pietras, Z, Hardwick, S.W, Luisi, B.F.
Deposit date:2011-05-23
Release date:2012-06-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Potential Regulatory Interactions of Escherichia Coli Rraa Protein with Dead-Box Helicases.
J.Biol.Chem., 288, 2013
1D98
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BU of 1d98 by Molmil
THE STRUCTURE OF AN OLIGO(DA).OLIGO(DT) TRACT AND ITS BIOLOGICAL IMPLICATIONS
Descriptor: DNA (5'-D(*CP*GP*CP*AP*AP*AP*AP*AP*AP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*TP*TP*TP*TP*TP*GP*CP*G)-3')
Authors:Nelson, H.C.M, Finch, J.T, Luisi, B.F, Klug, A.
Deposit date:1992-10-17
Release date:1993-04-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of an oligo(dA).oligo(dT) tract and its biological implications.
Nature, 330, 1987
1E3H
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BU of 1e3h by Molmil
SeMet derivative of Streptomyces antibioticus PNPase/GPSI enzyme
Descriptor: GUANOSINE PENTAPHOSPHATE SYNTHETASE, SULFATE ION
Authors:Symmons, M.F, Jones, G.H, Luisi, B.F.
Deposit date:2000-06-15
Release date:2000-11-05
Last modified:2019-11-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Duplicated Fold is the Structural Basis for Polynucleotide Phosphorylase Catalytic Activity, Processivity, and Regulation
Structure, 8, 2000
1E3P
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BU of 1e3p by Molmil
tungstate derivative of Streptomyces antibioticus PNPase/GPSI enzyme
Descriptor: Polyribonucleotide nucleotidyltransferase, SULFATE ION, TUNGSTATE(VI)ION
Authors:Symmons, M.F, Jones, G.H, Luisi, B.F.
Deposit date:2000-06-20
Release date:2000-11-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Duplicated Fold is the Structural Basis for Polynucleotide Phosphorylase Catalytic Activity, Processivity, and Regulation
Structure, 8, 2000
5NBB
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BU of 5nbb by Molmil
Structure of the C-terminal domain of the Escherichia Coli ProQ RNA binding protein
Descriptor: RNA chaperone ProQ
Authors:Gonzales, G, Hardwick, S, Maslen, S, Skehel, M, Holmqvist, E, Vogel, J, Bateman, A, Luisi, B, Broadhurst, R.
Deposit date:2017-03-01
Release date:2017-05-03
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of the Escherichia coli ProQ RNA-binding protein.
RNA, 23, 2017
6U1S
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BU of 6u1s by Molmil
Cryo-EM structure of a de novo designed 16-helix transmembrane nanopore, TMHC8_R.
Descriptor: de novo designed 16-helix transmembrane nanopore, TMHC8_R
Authors:Johnson, M.J, Reggiano, G, Xu, C, Lu, P, Hsia, Y, Brunette, T.J, DiMaio, F, Baker, D, Kollman, J.
Deposit date:2019-08-16
Release date:2020-08-19
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Computational Design of Transmembrane Channels
To Be Published
5NC5
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BU of 5nc5 by Molmil
Crystal structure of AcrBZ in complex with antibiotic puromycin
Descriptor: DARPin, DECANE, DODECANE, ...
Authors:Du, D, Luisi, B.
Deposit date:2017-03-03
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017
5NB9
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BU of 5nb9 by Molmil
Structure of the N-terminal domain of the Escherichia Coli ProQ RNA binding protein
Descriptor: RNA chaperone ProQ
Authors:Gonzales, G, Hardwick, S, Maslen, S, Skehel, M, Holmqvist, E, Vogel, J, Bateman, A, Luisi, B, Broadhurst, R.
Deposit date:2017-03-01
Release date:2017-05-03
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of the Escherichia coli ProQ RNA-binding protein.
RNA, 23, 2017
6M6Z
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BU of 6m6z by Molmil
A de novo designed transmembrane nanopore, TMH4C4
Descriptor: TMH4C4
Authors:Lu, P, Xu, C, Reggiano, G, Xu, Q, DiMaio, F, Baker, D.
Deposit date:2020-03-16
Release date:2020-06-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Computational design of transmembrane pores.
Nature, 585, 2020
4OXP
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BU of 4oxp by Molmil
X-ray crystal structure of the S1 and 5'-sensor domains of RNase E from Caulobacter crescentus
Descriptor: Ribonuclease E
Authors:Voss, J.E, Luisi, B.F.L, Hardwick, S.W.
Deposit date:2014-02-06
Release date:2014-12-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular recognition of RhlB and RNase D in the Caulobacter crescentus RNA degradosome.
Nucleic Acids Res., 42, 2014
3GCM
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BU of 3gcm by Molmil
Crystal Structure of E. coli polynucleotide phosphorylase bound to RNA and RNase E
Descriptor: CITRATE ANION, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Nurmohamed, S, Luisi, B.L.
Deposit date:2009-02-22
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Escherichia coli polynucleotide phosphorylase core bound to RNase E, RNA and manganese: implications for catalytic mechanism and RNA degradosome assembly.
J.Mol.Biol., 389, 2009
3GME
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BU of 3gme by Molmil
Crystal Structure of Polynucleotide Phosphorylase in complex with RNase E and manganese
Descriptor: MANGANESE (II) ION, Polyribonucleotide nucleotidyltransferase, Ribonuclease E
Authors:Nurmohamed, S, Luisi, B.L.
Deposit date:2009-03-13
Release date:2009-06-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Escherichia coli polynucleotide phosphorylase core bound to RNase E, RNA and manganese: implications for catalytic mechanism and RNA degradosome assembly.
J.Mol.Biol., 389, 2009
3GLL
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BU of 3gll by Molmil
Crystal structure of Polynucleotide Phosphorylase (PNPase) core
Descriptor: Polyribonucleotide nucleotidyltransferase
Authors:Nurmohamed, S, Luisi, B.L.
Deposit date:2009-03-12
Release date:2009-06-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of Escherichia coli polynucleotide phosphorylase core bound to RNase E, RNA and manganese: implications for catalytic mechanism and RNA degradosome assembly.
J.Mol.Biol., 389, 2009
6TNN
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BU of 6tnn by Molmil
Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
Descriptor: 50S ribosomal protein L10, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Oerum, S, Dendooven, T, Gilet, L, Catala, M, Degut, C, Trinquier, A, Barraud, P, Luisi, B, Condon, C, Tisne, C.
Deposit date:2019-12-09
Release date:2020-09-30
Last modified:2020-10-28
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020
6TPQ
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BU of 6tpq by Molmil
RNase M5 bound to 50S ribosome with precursor 5S rRNA
Descriptor: 50S ribosomal protein L10, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Oerum, S, Dendooven, T, Gilet, L, Catala, M, Degut, C, Trinquier, A, Barraud, P, Luisi, B, Condon, C, Tisne, C.
Deposit date:2019-12-13
Release date:2020-09-30
Last modified:2020-10-28
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020
6O35
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BU of 6o35 by Molmil
Crystal structure of a de novo designed octameric helical-bundle protein
Descriptor: de novo designed WSHC8
Authors:Bick, M.J, Xu, C, Sankaran, B, Baker, D.
Deposit date:2019-02-25
Release date:2020-03-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Computational design of transmembrane pores.
Nature, 585, 2020
4UOT
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BU of 4uot by Molmil
Thermodynamic hyperstability in parametrically designed helical bundles
Descriptor: DESIGNED HELICAL BUNDLE 5H2L
Authors:Oberdorfer, G, Huang, P, Pei, X.Y, Xu, C, Gonen, T, Nannenga, B, DiMaio, D, Rogers, J, Luisi, B.F, Baker, D.
Deposit date:2014-06-09
Release date:2014-11-05
Last modified:2014-11-19
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:High Thermodynamic Stability of Parametrically Designed Helical Bundles
Science, 346, 2014
4UOS
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BU of 4uos by Molmil
Thermodynamic hyperstability in parametrically designed helical bundles
Descriptor: DESIGNED HELICAL BUNDLE
Authors:Oberdorfer, G, Huang, P, Pei, X.Y, Xu, C, Gonen, T, Nannenga, B, DiMaio, D, Rogers, J, Luisi, B.F, Baker, D.
Deposit date:2014-06-09
Release date:2014-11-05
Last modified:2016-12-14
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:High Thermodynamic Stability of Parametrically Designed Helical Bundles
Science, 346, 2014
3H1C
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BU of 3h1c by Molmil
Crystal structure of Polynucleotide Phosphorylase (PNPase) core bound to RNase E and Tungstate
Descriptor: Polyribonucleotide nucleotidyltransferase, Ribonuclease E, TUNGSTATE(VI)ION
Authors:Nurmohamed, S.
Deposit date:2009-04-11
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.57 Å)
Cite:Crystal structure of Escherichia coli polynucleotide phosphorylase core bound to RNase E, RNA and manganese: implications for catalytic mechanism and RNA degradosome assembly
J.Mol.Biol., 389, 2009
8CWM
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BU of 8cwm by Molmil
Cryo-EM structure of the supercoiled S. islandicus REY15A archaeal flagellar filament
Descriptor: Flagellin
Authors:Kreutzberger, M.A.B, Liu, J, Krupovic, M, Egelman, E.H.
Deposit date:2022-05-19
Release date:2022-09-07
Last modified:2022-09-28
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Convergent evolution in the supercoiling of prokaryotic flagellar filaments.
Cell, 185, 2022
8CVI
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BU of 8cvi by Molmil
Cryo-EM structure of the supercoiled EPEC H6 flagellar filament core Curly I waveform
Descriptor: Flagellin
Authors:Kreutzberger, M.A, Chatterjee, S, Frankel, G, Egelman, E.H.
Deposit date:2022-05-18
Release date:2022-09-07
Last modified:2022-09-28
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Convergent evolution in the supercoiling of prokaryotic flagellar filaments.
Cell, 185, 2022
8CYE
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BU of 8cye by Molmil
Cryo-EM asymmetric reconstruction of the EPEC H6 bacterial flagellar filament Normal Waveform
Descriptor: Flagellin
Authors:Kreutzberger, M.A.B, Chatterjee, S, Frankel, G, Egelman, E.H.
Deposit date:2022-05-23
Release date:2022-09-07
Last modified:2022-09-28
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Convergent evolution in the supercoiling of prokaryotic flagellar filaments.
Cell, 185, 2022
8CXM
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BU of 8cxm by Molmil
Cryo-EM structure of the supercoiled E. coli K12 flagellar filament core, Normal waveform
Descriptor: Flagellin
Authors:Sonani, R.R, Kreutzberger, M.A.B, Sebastian, A.L, Scharf, B, Egelman, E.H.
Deposit date:2022-05-21
Release date:2022-09-07
Last modified:2022-09-28
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Convergent evolution in the supercoiling of prokaryotic flagellar filaments.
Cell, 185, 2022
6TGJ
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BU of 6tgj by Molmil
RNA-binding domain of RNase M5
Descriptor: Ribonuclease M5
Authors:Oerum, S, Catala, M, Degut, C, Tisne, C.
Deposit date:2019-11-15
Release date:2020-09-30
Last modified:2020-10-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020
6TG6
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BU of 6tg6 by Molmil
Toprim domain of RNase M5
Descriptor: Ribonuclease M5
Authors:Oerum, S, Catala, M, Tisne, C.
Deposit date:2019-11-15
Release date:2020-09-23
Last modified:2020-10-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020

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