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3V62
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BU of 3v62 by Molmil
Structure of the S. cerevisiae Srs2 C-terminal domain in complex with PCNA conjugated to SUMO on lysine 164
分子名称: ATP-dependent DNA helicase SRS2, N-ETHYLMALEIMIDE, Proliferating cell nuclear antigen, ...
著者Armstrong, A.A, Mohideen, F, Lima, C.D.
登録日2011-12-18
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Recognition of SUMO-modified PCNA requires tandem receptor motifs in Srs2.
Nature, 483, 2012
3V61
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BU of 3v61 by Molmil
Structure of S. cerevisiae PCNA conjugated to SUMO on lysine 164
分子名称: BARIUM ION, N-ETHYLMALEIMIDE, Proliferating cell nuclear antigen, ...
著者Armstrong, A.A, Mohideen, F, Lima, C.D.
登録日2011-12-18
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Recognition of SUMO-modified PCNA requires tandem receptor motifs in Srs2.
Nature, 483, 2012
3V60
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BU of 3v60 by Molmil
Structure of S. cerevisiae PCNA conjugated to SUMO on lysine 164
分子名称: Proliferating cell nuclear antigen, SULFATE ION, Ubiquitin-like protein SMT3
著者Armstrong, A.A, Mohideen, F, Lima, C.D.
登録日2011-12-18
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Recognition of SUMO-modified PCNA requires tandem receptor motifs in Srs2.
Nature, 483, 2012
6C90
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BU of 6c90 by Molmil
Human Mtr4 helicase in complex with ZCCHC8-CTD
分子名称: ADENOSINE-5'-DIPHOSPHATE, Exosome RNA helicase MTR4,Exosome RNA helicase MTR4, L(+)-TARTARIC ACID, ...
著者Puno, M.R, Lima, C.D.
登録日2018-01-25
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for MTR4-ZCCHC8 interactions that stimulate the MTR4 helicase in the nuclear exosome-targeting complex.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6D6R
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BU of 6d6r by Molmil
Human nuclear exosome-MTR4 RNA complex - composite map after focused reconstruction
分子名称: DNA/RNA (62-MER), Exosome RNA helicase MTR4, Exosome complex component CSL4, ...
著者Weick, E.-M, Lima, C.D.
登録日2018-04-22
公開日2018-06-20
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Helicase-Dependent RNA Decay Illuminated by a Cryo-EM Structure of a Human Nuclear RNA Exosome-MTR4 Complex.
Cell, 173, 2018
6D6Q
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BU of 6d6q by Molmil
Human nuclear exosome-MTR4 RNA complex - overall reconstruction
分子名称: DNA/RNA (62-MER), Exosome RNA helicase MTR4, Exosome complex component CSL4, ...
著者Weick, E.-M, Lima, C.D.
登録日2018-04-22
公開日2018-06-20
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Helicase-Dependent RNA Decay Illuminated by a Cryo-EM Structure of a Human Nuclear RNA Exosome-MTR4 Complex.
Cell, 173, 2018
4XQ0
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BU of 4xq0 by Molmil
Structure of fission yeast RNA polymerase II CTD phosphatase Fcp1-R271A bound to beryllium fluoride
分子名称: MAGNESIUM ION, RNA polymerase II subunit A C-terminal domain phosphatase, TETRAETHYLENE GLYCOL
著者Ghosh, A, Lima, C.D.
登録日2015-01-18
公開日2015-03-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Genetic and structural analysis of the essential fission yeast RNA polymerase II CTD phosphatase Fcp1.
Rna, 21, 2015
4XPZ
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BU of 4xpz by Molmil
Structure of fission yeast RNA polymerase II CTD phosphatase Fcp1-R271A bound to aluminum fluoride
分子名称: ALUMINUM FLUORIDE, MAGNESIUM ION, RNA polymerase II subunit A C-terminal domain phosphatase, ...
著者Ghosh, A, Lima, C.D.
登録日2015-01-18
公開日2015-03-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Genetic and structural analysis of the essential fission yeast RNA polymerase II CTD phosphatase Fcp1.
Rna, 21, 2015
3RTX
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BU of 3rtx by Molmil
Crystal structure of mammalian capping enzyme (Mce1) and Pol II CTD complex
分子名称: GUANINE, RNA Polymerase II C-terminal domain, mRNA-capping enzyme
著者Ghosh, A, Lima, C.D.
登録日2011-05-04
公開日2011-06-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Structural insights to how mammalian capping enzyme reads the CTD code.
Mol.Cell, 43, 2011
3SAF
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BU of 3saf by Molmil
Crystal structure of the human RRP6 catalytic domain with D313N mutation in the active site
分子名称: Exosome component 10, MAGNESIUM ION, YTTRIUM (III) ION
著者Januszyk, K, Liu, Q, Lima, C.D.
登録日2011-06-02
公開日2011-07-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Activities of human RRP6 and structure of the human RRP6 catalytic domain.
Rna, 17, 2011
3SAG
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BU of 3sag by Molmil
Crystal structure of the human RRP6 catalytic domain with D313N mutation in the active site
分子名称: Exosome component 10, MAGNESIUM ION, YTTRIUM (III) ION
著者Januszyk, K, Liu, Q, Lima, C.D.
登録日2011-06-02
公開日2011-07-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Activities of human RRP6 and structure of the human RRP6 catalytic domain.
Rna, 17, 2011
3SAH
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BU of 3sah by Molmil
Crystal structure of the human RRP6 catalytic domain with Y436A mutation in the catalytic site
分子名称: Exosome component 10, MAGNESIUM ION, YTTRIUM (III) ION
著者Januszyk, K, Liu, Q, Lima, C.D.
登録日2011-06-02
公開日2011-07-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Activities of human RRP6 and structure of the human RRP6 catalytic domain.
Rna, 17, 2011
5FG1
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BU of 5fg1 by Molmil
Structure of the conserved yeast listerin (Ltn1) selenomethionine-substituted N-terminal domain, TRIGONAL FORM
分子名称: E3 ubiquitin-protein ligase listerin, POTASSIUM ION
著者Doamekpor, S.K, Lima, C.D.
登録日2015-12-19
公開日2016-07-06
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structure and function of the yeast listerin (Ltn1) conserved N-terminal domain in binding to stalled 60S ribosomal subunits.
Proc.Natl.Acad.Sci.USA, 113, 2016
5FG0
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BU of 5fg0 by Molmil
Structure of the conserved yeast listerin (Ltn1) N-terminal domain, MONOCLINIC FORM
分子名称: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase listerin, POTASSIUM ION
著者Doamekpor, S.K, Lima, C.D.
登録日2015-12-19
公開日2016-07-06
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Structure and function of the yeast listerin (Ltn1) conserved N-terminal domain in binding to stalled 60S ribosomal subunits.
Proc.Natl.Acad.Sci.USA, 113, 2016
3EF1
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BU of 3ef1 by Molmil
The Structure of Fcp1, an essential RNA polymerase II CTD phosphatase
分子名称: MAGNESIUM ION, RNA polymerase II subunit A C-terminal domain phosphatase
著者Ghosh, A, Lima, C.D.
登録日2008-09-07
公開日2008-12-02
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The structure of Fcp1, an essential RNA polymerase II CTD phosphatase.
Mol.Cell, 32, 2008
3EF0
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BU of 3ef0 by Molmil
The Structure of Fcp1, an essential RNA polymerase II CTD phosphatase
分子名称: MAGNESIUM ION, RNA polymerase II subunit A C-terminal domain phosphatase, TETRAFLUOROALUMINATE ION
著者Ghosh, A, Lima, C.D.
登録日2008-09-07
公開日2008-12-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of Fcp1, an essential RNA polymerase II CTD phosphatase.
Mol.Cell, 32, 2008
5D2M
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BU of 5d2m by Molmil
Complex between human SUMO2-RANGAP1, UBC9 and ZNF451
分子名称: 1,2-ETHANEDIOL, Ran GTPase-activating protein 1, SUMO-conjugating enzyme UBC9, ...
著者Cappadocia, L, Lima, C.D.
登録日2015-08-05
公開日2015-11-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for catalytic activation by the human ZNF451 SUMO E3 ligase.
Nat.Struct.Mol.Biol., 22, 2015
4PZ7
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BU of 4pz7 by Molmil
PCE1 guanylyltransferase
分子名称: GLYCEROL, SULFATE ION, mRNA-capping enzyme subunit alpha
著者Doamekpor, S.K, Lima, C.D.
登録日2014-03-28
公開日2014-06-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.109 Å)
主引用文献How an mRNA capping enzyme reads distinct RNA polymerase II and Spt5 CTD phosphorylation codes.
Genes Dev., 28, 2014
4PZ8
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BU of 4pz8 by Molmil
PCE1 guanylyltransferase bound to SPT5 CTD
分子名称: SULFATE ION, Transcription elongation factor spt5, mRNA-capping enzyme subunit alpha
著者Doamekpor, S.K, Lima, C.D.
登録日2014-03-28
公開日2014-06-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献How an mRNA capping enzyme reads distinct RNA polymerase II and Spt5 CTD phosphorylation codes.
Genes Dev., 28, 2014
4PZ6
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BU of 4pz6 by Molmil
PCE1 guanylyltransferase bound to SER2/SER5 phosphorylated RNA pol II CTD
分子名称: DNA-directed RNA polymerase II subunit rpb1, GUANOSINE, mRNA-capping enzyme subunit alpha
著者Doamekpor, S.K, Lima, C.D.
登録日2014-03-28
公開日2014-06-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.406 Å)
主引用文献How an mRNA capping enzyme reads distinct RNA polymerase II and Spt5 CTD phosphorylation codes.
Genes Dev., 28, 2014
2CMU
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BU of 2cmu by Molmil
Crystal structure of a putative peptidyl-arginine deiminase
分子名称: PUTATIVE PEPTIDYL-ARGININE DEIMINASE
著者Rajashankar, K.R, Kniewel, R, Solorzano, V, Lima, C.D, New York Structural GenomiX Research Consortium (NYSGXRC)
登録日2006-05-13
公開日2006-05-24
最終更新日2019-08-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of a Putative Peptidyl-Arginine Deiminase.
To be Published
2FAQ
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BU of 2faq by Molmil
Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain with ATP and Manganese
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, SULFATE ION, ...
著者Zhu, H, Nandakumar, J, Aniukwu, J, Wang, L.K, Glickman, M.S, Lima, C.D, Shuman, S.
登録日2005-12-07
公開日2006-05-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D
Proc.Natl.Acad.Sci.USA, 103, 2006
2FAO
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BU of 2fao by Molmil
Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain
分子名称: SULFATE ION, probable ATP-dependent DNA ligase
著者Zhu, H, Nandakumar, J, Aniukwu, J, Wang, L.K, Glickman, M.S, Lima, C.D, Shuman, S.
登録日2005-12-07
公開日2006-05-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D
Proc.Natl.Acad.Sci.USA, 103, 2006
2FAR
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BU of 2far by Molmil
Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain with dATP and Manganese
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MANGANESE (II) ION, SULFATE ION, ...
著者Zhu, H, Nandakumar, J, Aniukwu, J, Wang, L.K, Glickman, M.S, Lima, C.D, Shuman, S.
登録日2005-12-07
公開日2006-05-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D
Proc.Natl.Acad.Sci.USA, 103, 2006
2FS2
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BU of 2fs2 by Molmil
Structure of the E. coli PaaI protein from the phyenylacetic acid degradation operon
分子名称: Phenylacetic acid degradation protein paaI, SULFATE ION
著者Kniewel, R, Buglino, J.A, Solorzano, V, Wu, J, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-01-20
公開日2006-02-07
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure, Function, and Mechanism of the Phenylacetate Pathway Hot Dog-fold Thioesterase PaaI
J.Biol.Chem., 281, 2006

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