Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1J2F
DownloadVisualize
BU of 1j2f by Molmil
X-ray crystal structure of IRF-3 and its functional implications
Descriptor: Interferon regulatory factor 3
Authors:Takahasi, K, Noda, N, Horiuchi, M, Mori, M, Okabe, Y, Fukuhara, Y, Terasawa, H, Fujita, T, Inagaki, F.
Deposit date:2003-01-04
Release date:2003-11-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray crystal structure of IRF-3 and its functional implications.
Nat.Struct.Biol., 10, 2003
1K1Z
DownloadVisualize
BU of 1k1z by Molmil
Solution structure of N-terminal SH3 domain mutant(P33G) of murine Vav
Descriptor: vav
Authors:Ogura, K, Nagata, K, Horiuchi, M, Ebisui, E, Hasuda, T, Yuzawa, S, Nishida, M, Hatanaka, H, Inagaki, F.
Deposit date:2001-09-26
Release date:2001-10-10
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Solution structure of N-terminal SH3 domain of Vav and the recognition site for Grb2 C-terminal SH3 domain
J.BIOMOL.NMR, 22, 2002
1HRE
DownloadVisualize
BU of 1hre by Molmil
SOLUTION STRUCTURE OF THE EPIDERMAL GROWTH FACTOR-LIKE DOMAIN OF HEREGULIN-ALPHA, A LIGAND FOR P180ERB4
Descriptor: HEREGULIN ALPHA
Authors:Nagata, K, Kohda, D, Hatanaka, H, Ichikawa, S, Inagaki, F.
Deposit date:1994-07-21
Release date:1994-10-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of the epidermal growth factor-like domain of heregulin-alpha, a ligand for p180erbB-4.
EMBO J., 13, 1994
1IPG
DownloadVisualize
BU of 1ipg by Molmil
SOLUTION STRUCTURE OF THE PB1 DOMAIN OF BEM1P
Descriptor: BEM1 PROTEIN
Authors:Terasawa, H, Noda, Y, Ito, T, Hatanaka, H, Ichikawa, S, Ogura, K, Sumimoto, H, Inagaki, F.
Deposit date:2001-05-14
Release date:2001-08-15
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure and ligand recognition of the PB1 domain: a novel protein module binding to the PC motif.
EMBO J., 20, 2001
1HRF
DownloadVisualize
BU of 1hrf by Molmil
SOLUTION STRUCTURE OF THE EPIDERMAL GROWTH FACTOR-LIKE DOMAIN OF HEREGULIN-ALPHA, A LIGAND FOR P180ERB4
Descriptor: HEREGULIN ALPHA
Authors:Nagata, K, Kohda, D, Hatanaka, H, Ichikawa, S, Inagaki, F.
Deposit date:1994-07-21
Release date:1994-10-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of the epidermal growth factor-like domain of heregulin-alpha, a ligand for p180erbB-4.
EMBO J., 13, 1994
1L4V
DownloadVisualize
BU of 1l4v by Molmil
SOLUTION STRUCTURE OF SAPECIN
Descriptor: Sapecin
Authors:Hanzawa, H, Iwai, H, Takeuchi, K, Kuzuhara, T, Komano, H, Kohda, D, Inagaki, F, Natori, S, Arata, Y, Shimada, I.
Deposit date:2002-03-06
Release date:2002-03-27
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:1H nuclear magnetic resonance study of the solution conformation of an antibacterial protein, sapecin.
FEBS Lett., 269, 1990
1TCJ
DownloadVisualize
BU of 1tcj by Molmil
STRUCTURE-ACTIVITY RELATIONSHIPS OF MU-CONOTOXIN GIIIA: STRUCTURE DETERMINATION OF ACTIVE AND INACTIVE SODIUM CHANNEL BLOCKER PEPTIDES BY NMR AND SIMULATED ANNEALING CALCULATIONS
Descriptor: MU-CONOTOXIN GIIIA
Authors:Kohda, D, Lancelin, J.-M, Inagaki, F, Wakamatsu, K.
Deposit date:1992-12-12
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Structure-activity relationships of mu-conotoxin GIIIA: structure determination of active and inactive sodium channel blocker peptides by NMR and simulated annealing calculations.
Biochemistry, 31, 1992
1TCH
DownloadVisualize
BU of 1tch by Molmil
STRUCTURE-ACTIVITY RELATIONSHIPS OF MU-CONOTOXIN GIIIA: STRUCTURE DETERMINATION OF ACTIVE AND INACTIVE SODIUM CHANNEL BLOCKER PEPTIDES BY NMR AND SIMULATED ANNEALING CALCULATIONS
Descriptor: MU-CONOTOXIN GIIIA
Authors:Lancelin, J.-M, Kohda, D, Inagaki, F.
Deposit date:1992-12-12
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Structure-activity relationships of mu-conotoxin GIIIA: structure determination of active and inactive sodium channel blocker peptides by NMR and simulated annealing calculations.
Biochemistry, 31, 1992
1TCG
DownloadVisualize
BU of 1tcg by Molmil
STRUCTURE-ACTIVITY RELATIONSHIPS OF MU-CONOTOXIN GIIIA: STRUCTURE DETERMINATION OF ACTIVE AND INACTIVE SODIUM CHANNEL BLOCKER PEPTIDES BY NMR AND SIMULATED ANNEALING CALCULATIONS
Descriptor: MU-CONOTOXIN GIIIA
Authors:Kohda, D, Lancelin, J.-M, Inagaki, F, Wakamatsu, K.
Deposit date:1992-12-12
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Structure-activity relationships of mu-conotoxin GIIIA: structure determination of active and inactive sodium channel blocker peptides by NMR and simulated annealing calculations.
Biochemistry, 31, 1992
1TCK
DownloadVisualize
BU of 1tck by Molmil
STRUCTURE-ACTIVITY RELATIONSHIPS OF MU-CONOTOXIN GIIIA: STRUCTURE DETERMINATION OF ACTIVE AND INACTIVE SODIUM CHANNEL BLOCKER PEPTIDES BY NMR AND SIMULATED ANNEALING CALCULATIONS
Descriptor: MU-CONOTOXIN GIIIA
Authors:Lancelin, J.-M, Kohda, D, Inagaki, F.
Deposit date:1992-12-12
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Structure-activity relationships of mu-conotoxin GIIIA: structure determination of active and inactive sodium channel blocker peptides by NMR and simulated annealing calculations.
Biochemistry, 31, 1992
1MKN
DownloadVisualize
BU of 1mkn by Molmil
N-TERMINAL HALF OF MIDKINE
Descriptor: PROTEIN (MIDKINE)
Authors:Iwasaki, W, Nagata, K, Hatanaka, H, Ogura, K, Inui, T, Kimura, T, Muramatsu, T, Yoshida, K, Tasumi, M, Inagaki, F.
Deposit date:1999-03-16
Release date:1999-03-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of midkine, a new heparin-binding growth factor.
EMBO J., 16, 1997
1Q1O
DownloadVisualize
BU of 1q1o by Molmil
Solution Structure of the PB1 Domain of Cdc24p (Long Form)
Descriptor: Cell division control protein 24
Authors:Yoshinaga, S, Kohjima, M, Ogura, K, Yokochi, M, Takeya, R, Ito, T, Sumimoto, H, Inagaki, F.
Deposit date:2003-07-22
Release date:2003-10-14
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The PB1 domain and the PC motif-containing region are structurally similar protein binding modules
EMBO J., 22, 2003
2JPE
DownloadVisualize
BU of 2jpe by Molmil
FHA domain of NIPP1
Descriptor: Nuclear inhibitor of protein phosphatase 1
Authors:Kumeta, H, Ogura, K, Fujioka, Y, Tanuma, N, Kikuchi, K, Inagaki, F.
Deposit date:2007-05-07
Release date:2007-05-15
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:The NMR structure of the NIPP1 FHA domain.
J.Biomol.Nmr, 40, 2008
2K6Q
DownloadVisualize
BU of 2k6q by Molmil
LC3 p62 complex structure
Descriptor: Microtubule-associated proteins 1A/1B light chain 3B, p62_peptide from Sequestosome-1
Authors:Noda, N, Kumeta, H, Nakatogawa, H, Satoo, K, Adachi, W, Ishii, J, Fujioka, Y, Ohsumi, Y, Inagaki, F.
Deposit date:2008-07-17
Release date:2008-09-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis of target recognition by ATG8/LC3 during selective autophagy
To be Published
2KFJ
DownloadVisualize
BU of 2kfj by Molmil
Solution structure of the loop deletion mutant of PB1 domain of Cdc24p
Descriptor: Cell division control protein 24
Authors:Ogura, K, Tandai, T, Yoshinaga, S, Kobashigawa, Y, Kumeta, H, Inagaki, F.
Deposit date:2009-02-22
Release date:2009-10-06
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:NMR structure of the heterodimer of Bem1 and Cdc24 PB1 domains from Saccharomyces cerevisiae
J.Biochem., 146, 2009
2KFK
DownloadVisualize
BU of 2kfk by Molmil
Solution structure of Bem1p PB1 domain complexed with Cdc24p PB1 domain
Descriptor: Bud emergence protein 1, Cell division control protein 24
Authors:Kobashigawa, Y, Yoshinaga, S, Tandai, T, Ogura, K, Inagaki, F.
Deposit date:2009-02-23
Release date:2009-10-06
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:NMR structure of the heterodimer of Bem1 and Cdc24 PB1 domains from Saccharomyces cerevisiae
J.Biochem., 146, 2009
2YZ0
DownloadVisualize
BU of 2yz0 by Molmil
Solution Structure of RWD/GI domain of Saccharomyces cerevisiae GCN2
Descriptor: Serine/threonine-protein kinase GCN2
Authors:Ogura, K, Torikai, S, Kumeta, H, Inagaki, F.
Deposit date:2007-05-02
Release date:2008-05-06
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of RWD/GI domain of Saccharomyces cerevisiae GCN2
to be published
2Z0D
DownloadVisualize
BU of 2z0d by Molmil
The crystal structure of human Atg4B- LC3(1-120) complex
Descriptor: Cysteine protease ATG4B, Microtubule-associated proteins 1A/1B light chain 3B
Authors:Satoo, K, Noda, N.N, Inagaki, F.
Deposit date:2007-05-07
Release date:2007-05-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Embo J., 28, 2009
2Z0E
DownloadVisualize
BU of 2z0e by Molmil
The crystal structure of human Atg4B- LC3(1-124) complex
Descriptor: Cysteine protease ATG4B, Microtubule-associated proteins 1A/1B light chain 3B
Authors:Satoo, K, Noda, N.N, Inagaki, F.
Deposit date:2007-05-07
Release date:2007-05-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Embo J., 28, 2009
3A7P
DownloadVisualize
BU of 3a7p by Molmil
The crystal structure of Saccharomyces cerevisiae Atg16
Descriptor: Autophagy protein 16
Authors:Fujioka, Y, Noda, N.N, Inagaki, F.
Deposit date:2009-10-01
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Dimeric coiled-coil structure of Saccharomyces cerevisiae Atg16 and its functional significance in autophagy.
J.Biol.Chem., 285, 2010
3A77
DownloadVisualize
BU of 3a77 by Molmil
The crystal structure of phosphorylated IRF-3
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, Interferon regulatory factor 3
Authors:Takahasi, K, Horiuchi, M, Noda, N.N, Inagaki, F.
Deposit date:2009-09-17
Release date:2010-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ser386 phosphorylation of transcription factor IRF-3 induces dimerization and association with CBP/p300 without overall conformational change.
Genes Cells, 15, 2010
2ZPN
DownloadVisualize
BU of 2zpn by Molmil
The crystal structure of Saccharomyces cerevisiae Atg8- Atg19(412-415) complex
Descriptor: Autophagy-related protein 8, SULFATE ION, Saccharomyces cerevisiae Atg19(412-415)
Authors:Noda, N.N, Inagaki, F.
Deposit date:2008-07-17
Release date:2008-12-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of target recognition by Atg8/LC3 during selective autophagy
Genes Cells, 13, 2008
2ZZP
DownloadVisualize
BU of 2zzp by Molmil
The crystal structure of human Atg4B(C74S)- LC3(1-124) complex
Descriptor: Cysteine protease ATG4B, Microtubule-associated proteins 1A/1B light chain 3B
Authors:Satoo, K, Noda, N.N, Inagaki, F.
Deposit date:2009-02-22
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Embo J., 28, 2009
3A7O
DownloadVisualize
BU of 3a7o by Molmil
The crystal structure of the coiled-coil domain of Saccharomyces cerevisiae Atg16
Descriptor: Autophagy protein 16
Authors:Fujioka, Y, Noda, N.N, Inagaki, F.
Deposit date:2009-10-01
Release date:2009-11-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Dimeric coiled-coil structure of Saccharomyces cerevisiae Atg16 and its functional significance in autophagy.
J.Biol.Chem., 285, 2010
1ERA
DownloadVisualize
BU of 1era by Molmil
TERTIARY STRUCTURE OF ERABUTOXIN B IN AQUEOUS SOLUTION ELUCIDATED BY TWO-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE
Descriptor: ERABUTOXIN B
Authors:Hatanaka, H, Kohda, D, Inagaki, F.
Deposit date:1994-03-28
Release date:1994-06-22
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Tertiary structure of erabutoxin b in aqueous solution as elucidated by two-dimensional nuclear magnetic resonance.
J.Mol.Biol., 240, 1994

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon