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2KQM
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BU of 2kqm by Molmil
Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain
Descriptor: Ig kappa chain V-I region AU
Authors:Volkman, B.F, Peterson, F.C, Ramirez-Alvarado, M, Baden, E.M.
Deposit date:2009-11-11
Release date:2010-03-16
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A single mutation promotes amyloidogenicity through a highly promiscuous dimer interface.
Structure, 18, 2010
2KEC
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BU of 2kec by Molmil
Structure of SDF-1/CXCL12
Descriptor: Stromal cell-derived factor 1-alpha
Authors:Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
Deposit date:2009-01-28
Release date:2009-09-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Monomeric structure of the cardioprotective chemokine SDF-1/CXCL12
Protein Sci., 18, 2009
2KOM
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BU of 2kom by Molmil
Solution structure of humar Par-3b PDZ2 (residues 451-549)
Descriptor: Partitioning defective 3 homolog
Authors:Volkman, B.F, Tyler, R.C, Peterson, F.C, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-09-24
Release date:2009-11-10
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Rapid, robotic, small-scale protein production for NMR screening and structure determination.
Protein Sci., 19, 2010
2KVB
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BU of 2kvb by Molmil
Solution structure of CI-MPR domain 5 bound to N-acetylglucosaminyl 6-phosphomethylmannoside
Descriptor: Cation-independent mannose-6-phosphate receptor
Authors:Olson, L.J, Peterson, F.C, Volkman, B.F, Dahms, N.M.
Deposit date:2010-03-10
Release date:2010-07-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for recognition of phosphodiester-containing lysosomal enzymes by the cation-independent mannose 6-phosphate receptor.
Proc.Natl.Acad.Sci.USA, 107, 2010
2KEE
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BU of 2kee by Molmil
Structure of SDF-1/CXCL12
Descriptor: Stromal cell-derived factor 1-alpha
Authors:Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
Deposit date:2009-01-28
Release date:2009-09-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Monomeric structure of the cardioprotective chemokine SDF-1/CXCL12
Protein Sci., 18, 2009
2KVA
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BU of 2kva by Molmil
SOLUTION STRUCTURE OF CI-MPR ligand-free domain 5
Descriptor: Cation-independent mannose-6-phosphate receptor
Authors:Olson, L.J, Peterson, F.C, Volkman, B.F, Dahms, N.M.
Deposit date:2010-03-10
Release date:2010-07-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for recognition of phosphodiester-containing lysosomal enzymes by the cation-independent mannose 6-phosphate receptor.
Proc.Natl.Acad.Sci.USA, 107, 2010
2KOH
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BU of 2koh by Molmil
NMR structure of mouse Par3-PDZ3 in complex with VE-Cadherin C-terminus
Descriptor: Cadherin-5, Partitioning defective 3 homolog
Authors:Volkman, B.F, Tyler, R.C, Peterson, F.C.
Deposit date:2009-09-22
Release date:2010-02-09
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Distal interactions within the par3-VE-cadherin complex.
Biochemistry, 49, 2010
2KQN
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BU of 2kqn by Molmil
Solution structure of the AL-09 H87Y immunoglobulin light chain variable domain
Descriptor: Ig kappa chain V-I region AU
Authors:Volkman, B.F, Peterson, F.C, Ramirez-Alvarado, M, Baden, E.M.
Deposit date:2009-11-11
Release date:2010-03-16
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:A single mutation promotes amyloidogenicity through a highly promiscuous dimer interface.
Structure, 18, 2010
2KY5
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BU of 2ky5 by Molmil
Solution structure of the PECAM-1 cytoplasmic tail with DPC
Descriptor: Platelet endothelial cell adhesion molecule
Authors:Lytle, B.L, Peterson, F.C, Volkman, B.F, Paddock, C, Newman, D.K, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2010-05-14
Release date:2010-05-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Residues within a lipid-associated segment of the PECAM-1 cytoplasmic domain are susceptible to inducible, sequential phosphorylation.
Blood, 117, 2011
2KOL
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BU of 2kol by Molmil
Solution structure of human SDF1-alpha H25R
Descriptor: Stromal cell-derived factor 1
Authors:Volkman, B.F, Ziarek, J.J, Peterson, F.C, Veldkamp, C.T.
Deposit date:2009-09-24
Release date:2010-10-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of human SDF1-alpha H25R
To be Published
2KED
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BU of 2ked by Molmil
Structure of SDF-1/CXCL12
Descriptor: Stromal cell-derived factor 1-alpha
Authors:Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
Deposit date:2009-01-28
Release date:2009-09-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Monomeric structure of the cardioprotective chemokine SDF-1/CXCL12
Protein Sci., 18, 2009
2L2K
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BU of 2l2k by Molmil
Solution NMR structure of the R/G STEM LOOP RNA-ADAR2 DSRBM2 Complex
Descriptor: Adenosine deaminase, RNA (42-MER)
Authors:Allain, F.H.-T, Oberstrass, F.C, Stefl, R.
Deposit date:2010-08-20
Release date:2010-10-27
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove.
Cell(Cambridge,Mass.), 143, 2010
2LC7
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BU of 2lc7 by Molmil
Solution structure of the isolated Par-6 PDZ domain
Descriptor: Par-6
Authors:Volkman, B.F, Whitney, D.S, Peterson, F.C.
Deposit date:2011-04-25
Release date:2011-11-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A Conformational Switch in the CRIB-PDZ Module of Par-6.
Structure, 19, 2011
2L47
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BU of 2l47 by Molmil
Solution structure of the PlyG catalytic domain
Descriptor: N-acetylmuramoyl-L-alanine amidase, ZINC ION
Authors:Volkman, B.F, Dias, J.S, Peterson, F.C.
Deposit date:2010-10-01
Release date:2011-10-12
Method:SOLUTION NMR
Cite:Tbd
To be Published
2LSS
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BU of 2lss by Molmil
Solution structure of the R. rickettsii cold shock-like protein
Descriptor: Cold shock-like protein
Authors:Veldkamp, C.T, Peterson, F.C, Gerarden, K.P, Fuchs, A.M, Koch, J.M, Mueller, M.M.
Deposit date:2012-05-04
Release date:2012-05-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of the cold-shock-like protein from Rickettsia rickettsii.
Acta Crystallogr.,Sect.F, 68, 2012
2L48
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BU of 2l48 by Molmil
Solution structure of the PlyG cell wall binding domain
Descriptor: N-acetylmuramoyl-L-alanine amidase
Authors:Volkman, B.F, Dias, J.S, Peterson, F.C.
Deposit date:2010-10-01
Release date:2011-10-12
Method:SOLUTION NMR
Cite:Tbd
To be Published
2L3J
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BU of 2l3j by Molmil
The solution structure of the ADAR2 dsRBM-RNA complex reveals a sequence-specific read out of the minor groove
Descriptor: Double-stranded RNA-specific editase 1, RNA (71-MER)
Authors:Stefl, R, Oberstrass, F.C, Allain, F.H.-T.
Deposit date:2010-09-14
Release date:2010-10-27
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove.
Cell(Cambridge,Mass.), 143, 2010
5D9G
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BU of 5d9g by Molmil
Crystal structure of TIPRL, TOR signaling pathway regulator-like, in complex with peptide
Descriptor: CHLORIDE ION, NICKEL (II) ION, PHOSPHATE ION, ...
Authors:Scorsato, V, Sandy, J, Brandao-Neto, J, Pereira, H.M, Smetana, J.H.C, Aparicio, R.
Deposit date:2015-08-18
Release date:2016-08-10
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of the human Tip41 orthologue, TIPRL, reveals a novel fold and a binding site for the PP2Ac C-terminus.
Sci Rep, 6, 2016
8G46
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BU of 8g46 by Molmil
Cryo-EM structure of DDB1deltaB-DDA1-DCAF16-BRD4(BD2)-MMH2
Descriptor: Bromodomain-containing protein 4, DDB1- and CUL4-associated factor 16, DET1- and DDB1-associated protein 1, ...
Authors:Ma, M.W, Hunkeler, M, Jin, C.Y, Fischer, E.S.
Deposit date:2023-02-08
Release date:2023-03-08
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Template-assisted covalent modification of DCAF16 underlies activity of BRD4 molecular glue degraders.
Biorxiv, 2023
1FY1
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BU of 1fy1 by Molmil
[R23S,F25E]HBP, A MUTANT OF HUMAN HEPARIN BINDING PROTEIN (CAP37)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ETHANOL, ...
Authors:Kastrup, J.S, Linde, V, Pedersen, A.K, Stoffer, B, Iversen, L.F, Larsen, I.K, Rasmussen, P.B, Flodgaard, H.J, Bjorn, S.E.
Deposit date:2000-09-28
Release date:2001-09-28
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Two mutants of human heparin binding protein (CAP37): toward the understanding of the nature of lipid A/LPS and BPTI binding.
Proteins, 42, 2001
1FY3
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BU of 1fy3 by Molmil
[G175Q]HBP, A mutant of human heparin binding protein (CAP37)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Kastrup, J.S, Linde, V, Pedersen, A.K, Stoffer, B, Iversen, L.F, Larsen, I.K, Rasmussen, P.B, Flodgaard, H.J, Bjorn, S.E.
Deposit date:2000-09-28
Release date:2001-09-28
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Two mutants of human heparin binding protein (CAP37): toward the understanding of the nature of lipid A/LPS and BPTI binding.
Proteins, 42, 2001
1A7S
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BU of 1a7s by Molmil
ATOMIC RESOLUTION STRUCTURE OF HBP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Karlsen, S, Iversen, L.F, Larsen, I.K, Flodgaard, H.J, Kastrup, J.S.
Deposit date:1998-03-17
Release date:1999-03-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Atomic resolution structure of human HBP/CAP37/azurocidin.
Acta Crystallogr.,Sect.D, 54, 1998
1AWC
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BU of 1awc by Molmil
MOUSE GABP ALPHA/BETA DOMAIN BOUND TO DNA
Descriptor: DNA (5'-D(*AP*AP*(BRU)P*GP*AP*CP*CP*GP*GP*AP*AP*GP*TP*AP*(CBR)P*AP*CP*(CBR)P*GP*GP*A)-3'), DNA (5'-D(*TP*TP*CP*CP*GP*GP*(BRU)P*GP*(BRU)P*AP*CP*TP*TP*CP*CP*GP*GP*TP*CP*AP*T)-3'), PROTEIN (GA BINDING PROTEIN ALPHA), ...
Authors:Batchelor, A.H, Wolberger, C.
Deposit date:1997-10-01
Release date:1998-03-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The structure of GABPalpha/beta: an ETS domain- ankyrin repeat heterodimer bound to DNA.
Science, 279, 1998
8S9E
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BU of 8s9e by Molmil
Solution structure of jarastatin (rJast), a disintegrin from Bothrops jararaca
Descriptor: Disintegrin jarastatin
Authors:Vasconcelos, A.A, Estrada, J.E.C, Zingali, R.B, Almeida, F.C.L.
Deposit date:2023-03-28
Release date:2023-11-29
Method:SOLUTION NMR
Cite:Toward the mechanism of jarastatin (rJast) inhibition of the integrin alpha V beta 3
Int.J.Biol.Macromol., 255, 2024
8UUN
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BU of 8uun by Molmil
Prototypic SARS-CoV-2 spike (containing V417) in the closed conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Geng, Q, Liu, B, Li, F.
Deposit date:2023-11-01
Release date:2023-11-29
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Lys417 acts as a molecular switch that regulates the conformation of SARS-CoV-2 spike protein.
Elife, 12, 2023

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