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1CLH
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BU of 1clh by Molmil
THREE-DIMENSIONAL SOLUTION STRUCTURE OF ESCHERICHIA COLI PERIPLASMIC CYCLOPHILIN
分子名称: CYCLOPHILIN
著者Clubb, R.T, Wagner, G.
登録日1993-12-20
公開日1994-05-31
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of Escherichia coli periplasmic cyclophilin
Biochemistry, 33, 1994
2BB8
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N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: INTEGRASE
著者Clubb, R.T, Connolly, K.M, Wojciak, J.M.
登録日1998-05-12
公開日1998-11-25
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Site-specific DNA binding using a variation of the double stranded RNA binding motif.
Nat.Struct.Biol., 5, 1998
1B69
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THE SOLUTION STRUCTURE OF TN916 INTEGRASE N-TERMINAL DOMAIN/DNA COMPLEX
分子名称: DNA (5'-D(*GP*AP*AP*TP*TP*TP*AP*CP*TP*AP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*TP*AP*GP*TP*AP*AP*AP*TP*TP*C)-3'), PROTEIN (INTEGRASE)
著者Clubb, R.T, Wojciak, J.M, Connolly, K.M.
登録日1999-01-21
公開日1999-09-29
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of the Tn916 integrase-DNA complex.
Nat.Struct.Biol., 6, 1999
1BB8
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N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, 25 STRUCTURES
分子名称: INTEGRASE
著者Clubb, R.T, Connolly, K.M, Wojciak, J.M.
登録日1998-04-29
公開日1998-11-25
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Site-specific DNA binding using a variation of the double stranded RNA binding motif.
Nat.Struct.Biol., 5, 1998
2EZH
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BU of 2ezh by Molmil
SOLUTION NMR STRUCTURE OF THE IGAMMA SUBDOMAIN OF THE MU END DNA BINDING DOMAIN OF MU PHAGE TRANSPOSASE, MINIMIZED AVERAGE STRUCTURE
分子名称: TRANSPOSASE
著者Clore, G.M, Clubb, R.T, Schumaker, S, Gronenborn, A.M.
登録日1997-07-25
公開日1997-12-03
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of the I gamma subdomain of the Mu end DNA-binding domain of phage Mu transposase.
J.Mol.Biol., 273, 1997
2EZI
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BU of 2ezi by Molmil
SOLUTION NMR STRUCTURE OF THE IGAMMA SUBDOMAIN OF THE MU END DNA BINDING DOMAIN OF MU PHAGE TRANSPOSASE, 30 STRUCTURES
分子名称: TRANSPOSASE
著者Clore, G.M, Clubb, R.T, Schumaker, S, Gronenborn, A.M.
登録日1997-07-25
公開日1997-12-03
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of the I gamma subdomain of the Mu end DNA-binding domain of phage Mu transposase.
J.Mol.Biol., 273, 1997
1TNT
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BU of 1tnt by Molmil
A NOVEL CLASS OF WINGED HELIX-TURN-HELIX PROTEIN: THE DNA-BINDING DOMAIN OF MU TRANSPOSASE
分子名称: MU-TRANSPOSASE
著者Clore, G.M, Clubb, R.T, Omichinski, J.G, Gronenborn, A.M.
登録日1994-10-10
公開日1995-02-14
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献A novel class of winged helix-turn-helix protein: the DNA-binding domain of Mu transposase.
Structure, 2, 1994
1TNS
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A NOVEL CLASS OF WINGED HELIX-TURN-HELIX PROTEIN: THE DNA-BINDING DOMAIN OF MU TRANSPOSASE
分子名称: MU-TRANSPOSASE
著者Clore, G.M, Clubb, R.T, Omichinski, J.G, Gronenborn, A.M.
登録日1994-10-10
公開日1995-02-14
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献A novel class of winged helix-turn-helix protein: the DNA-binding domain of Mu transposase.
Structure, 2, 1994
1TN9
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BU of 1tn9 by Molmil
THE SOLUTION STRUCTURE OF TN916 INTEGRASE N-TERMINAL DOMAIN/DNA COMPLEX
分子名称: DNA (5'-D(*GP*AP*AP*TP*TP*TP*AP*CP*TP*AP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*TP*AP*GP*TP*AP*AP*AP*TP*TP*C)-3'), PROTEIN (INTEGRASE)
著者Clubb, R.T, Wojciak, J.M, Connolly, K.M.
登録日1999-01-21
公開日1999-09-29
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of the Tn916 integrase-DNA complex.
Nat.Struct.Biol., 6, 1999
8SQX
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BU of 8sqx by Molmil
Solution structure of the basal pilin SpaB from Corynebacterium diphtheriae
分子名称: Putative surface anchored protein
著者Sue, C.K, Mahoney, B.J, Cheung, N.A, Clubb, R.T.
登録日2023-05-04
公開日2023-06-07
最終更新日2024-01-31
実験手法SOLUTION NMR
主引用文献The basal and major pilins in the Corynebacterium diphtheriae SpaA pilus adopt similar structures that competitively react with the pilin polymerase.
Biopolymers, 115, 2024
8SMU
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BU of 8smu by Molmil
Integral fusion of the HtaA CR2 domain from Corynebacterium diphtheriae within EGFP
分子名称: CHLORIDE ION, GLYCEROL, HtaACR2 integral fusion within enhanced green fluorescent protein, ...
著者Mahoney, B.J, Cascio, D, Clubb, R.T.
登録日2023-04-26
公開日2023-09-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Development and atomic structure of a new fluorescence-based sensor to probe heme transfer in bacterial pathogens.
J.Inorg.Biochem., 249, 2023
8DOV
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BU of 8dov by Molmil
Crystal structure of the Shr Hemoglobin Interacting Domain 2 (HID2) in complex with Hemoglobin
分子名称: GLYCEROL, Heme-binding protein Shr, Hemoglobin subunit alpha, ...
著者Macdonald, R, Mahoney, B.J, Cascio, D, Clubb, R.T.
登録日2022-07-14
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Shr receptor from Streptococcus pyogenes uses a cap and release mechanism to acquire heme-iron from human hemoglobin.
Proc.Natl.Acad.Sci.USA, 120, 2023
7SJY
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BU of 7sjy by Molmil
Crystal structure of Clostridium thermocellum RsgI9 S1C-NTF2 bi-domain
分子名称: Anti-sigma-I factor RsgI9, GLYCEROL
著者Mahoney, B.J, Cascio, D, Clubb, R.T.
登録日2021-10-19
公開日2022-03-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structure of the Clostridium thermocellum RsgI9 ectodomain provides insight into the mechanism of biomass sensing.
Proteins, 90, 2022
7MPK
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BU of 7mpk by Molmil
Crystal structure of TagA with UDP-GlcNAc
分子名称: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
著者Martinez, O.E, Cascio, D, Clubb, R.T.
登録日2021-05-04
公開日2021-12-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.993 Å)
主引用文献Insight into the molecular basis of substrate recognition by the wall teichoic acid glycosyltransferase TagA.
J.Biol.Chem., 298, 2021
7N41
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Crystal structure of TagA with UDP-ManNAc
分子名称: (2R,3S,4R,5S,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name), N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase
著者Martinez, O.E, Cascio, D, Clubb, R.T.
登録日2021-06-03
公開日2021-12-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Insight into the molecular basis of substrate recognition by the wall teichoic acid glycosyltransferase TagA.
J.Biol.Chem., 298, 2021
6DKQ
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BU of 6dkq by Molmil
Crystal structure of the Shr Hemoglobin Interacting Domain 2
分子名称: Heme-binding protein Shr, SULFATE ION
著者Macdonald, R, Cascio, D, Collazo, M.J, Clubb, R.T.
登録日2018-05-30
公開日2018-10-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Streptococcus pyogenes Shr protein captures human hemoglobin using two structurally unique binding domains.
J.Biol.Chem., 293, 2018
7K7F
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BU of 7k7f by Molmil
Solution Structure of the Corynebacterium diphtheriae SpaA Pilin-Signal Peptide Complex
分子名称: Putative surface-anchored fimbrial subunit, SpaA sorting signal peptide
著者McConnell, S.A, Clubb, R.T.
登録日2020-09-22
公開日2021-03-10
最終更新日2021-04-21
実験手法SOLUTION NMR
主引用文献Sortase-assembled pili in Corynebacterium diphtheriae are built using a latch mechanism.
Proc.Natl.Acad.Sci.USA, 118, 2021
5CUW
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BU of 5cuw by Molmil
Crystal structure of Sortase E1 from Streptomyces coelicolor with tripeptide in the active site
分子名称: GLYCEROL, SrtE1
著者Kattke, M.D, Cascio, D, Sawaya, M.R, Clubb, R.T.
登録日2015-07-25
公開日2016-08-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.887 Å)
主引用文献Crystal structure of the first class E sortase transpeptidase, SrtE1 from Streptomyces coelicolor
To be published
2WCC
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BU of 2wcc by Molmil
phage lambda IntDBD1-64 complex with p prime 2 DNA
分子名称: DNA (5'-D(*DCP*DGP*DAP*DGP*DTP*DCP*DAP *DAP*DAP*DAP*DTP*DC)-3'), DNA (5'-D(*DGP*DAP*DTP*DTP*DTP*DTP*DGP *DAP*DCP*DTP*DGP*DC)-3'), INTEGRASE
著者Fadeev, E.A, Sam, M.D, Clubb, R.T.
登録日2009-03-11
公開日2009-04-07
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献NMR Structure of the Amino-Terminal Domain of the Lambda Integrase Protein in Complex with DNA: Immobilization of a Flexible Tail Facilitates Beta- Sheet Recognition of the Major Groove.
J.Mol.Biol., 388, 2009
5WB4
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BU of 5wb4 by Molmil
Crystal structure of the TarA wall teichoic acid glycosyltransferase
分子名称: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase, SULFATE ION
著者Kattke, M.D, Cascio, D, Sawaya, M.R, Clubb, R.T.
登録日2017-06-27
公開日2019-01-16
最終更新日2019-07-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and mechanism of TagA, a novel membrane-associated glycosyltransferase that produces wall teichoic acids in pathogenic bacteria.
Plos Pathog., 15, 2019
5WFG
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BU of 5wfg by Molmil
Crystal structure of the TarA wall teichoic acid glycosyltransferase bound to UDP
分子名称: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase, URIDINE-5'-DIPHOSPHATE
著者Kattke, M.D, Cascio, D, Sawaya, M.R, Clubb, R.T.
登録日2017-07-11
公開日2019-01-16
最終更新日2019-07-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure and mechanism of TagA, a novel membrane-associated glycosyltransferase that produces wall teichoic acids in pathogenic bacteria.
Plos Pathog., 15, 2019
4LFD
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BU of 4lfd by Molmil
Staphylococcus aureus sortase B-substrate complex
分子名称: (CBZ)NPQ(B27) PEPTIDE, SULFATE ION, Sortase B
著者Jacobitz, A.W, Sawaya, M.R, Yi, S.W, Amer, B.R, Huang, G.L, Nguyen, A.V, Jung, M.E, Clubb, R.T.
登録日2013-06-26
公開日2014-02-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structural and Computational Studies of the Staphylococcus aureus Sortase B-Substrate Complex Reveal a Substrate-stabilized Oxyanion Hole.
J.Biol.Chem., 289, 2014
4MYP
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BU of 4myp by Molmil
Structure of the central NEAT domain, N2, of the listerial Hbp2 protein complexed with heme
分子名称: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Malmirchegini, G.R, Sawaya, M.R, Clubb, R.T.
登録日2013-09-27
公開日2014-10-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Novel Mechanism of Hemin Capture by Hbp2, the Hemoglobin-binding Hemophore from Listeria monocytogenes.
J.Biol.Chem., 289, 2014
4NLA
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BU of 4nla by Molmil
Structure of the central NEAT domain, N2, of the listerial Hbp2 protein, apo form
分子名称: Iron-regulated surface determinant protein A, SULFATE ION
著者Malmirchegini, G.R, Sawaya, M.R, Clubb, R.T.
登録日2013-11-14
公開日2014-10-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Novel Mechanism of Hemin Capture by Hbp2, the Hemoglobin-binding Hemophore from Listeria monocytogenes.
J.Biol.Chem., 289, 2014
8U9O
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BU of 8u9o by Molmil
Solution structure of RsgI9 CRE domain from C. thermocellum
分子名称: Anti-sigma-I factor RsgI9
著者Takayesu, A, Mahoney, B.J, Clubb, R.T.
登録日2023-09-19
公開日2024-04-24
実験手法SOLUTION NMR
主引用文献Insight into the autoproteolysis mechanism of the RsgI9 anti-sigma factor from Clostridium thermocellum.
Proteins, 2024

 

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